RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 MAN2A1Q16706 1144 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 NT5DC4Q86YG4 428 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 GJA10Q969M2 543 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 NUP85Q9BW27 656 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 STXBP3O00186 592 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 MAP3K13O43283 966 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 SUPT3HO75486 399 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 VPS41P49754 854 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 HPCAP84074 193 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 KLHL38Q2WGJ6 581 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 ZNF667Q5HYK9 610 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 IFNL3Q8IZI9 196 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 C7orf31Q8N865 590 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 PYROXD1Q8WU10 500 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 TMEM106CQ9BVX2 250 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 BSDC1Q9NW68 430 aaPredicted RBP7.95□□□□□ -1.14
SYNE2-205ENST00000394768 NFKBIL1Q9UBC1 381 aaPredicted RBP7.95□□□□□ -1.14
SYNE2-205ENST00000394768 PBRM1Q86U86 1689 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 FRMPD2Q68DX3 1309 aaPredicted RBP7.95□□□□□ -1.14
SYNE2-205ENST00000394768 GNGT1P63211 74 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 AP3B2Q13367 1082 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 KLHL8Q9P2G9 620 aaPredicted RBP7.95□□□□□ -1.14
SYNE2-205ENST00000394768 DOLKQ9UPQ8 538 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 APOBEC2Q9Y235 224 aaKnown RBP7.95□□□□□ -1.14
SYNE2-205ENST00000394768 DYRK3O43781 588 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 APPL2Q8NEU8 664 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 PBXIP1Q96AQ6 731 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 CNOT6LQ96LI5 555 aaKnown RBP7.95□□□□□ -1.14
SYNE2-205ENST00000394768 THRAP3Q9Y2W1 955 aaKnown RBP7.95□□□□□ -1.14
SYNE2-205ENST00000394768 IQCA1LA6NCM1 817 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 CMA1P23946 247 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 ABCE1P61221 599 aaKnown RBP7.95□□□□□ -1.14
SYNE2-205ENST00000394768 TFDP2Q14188 446 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 C16orf62Q7Z3J2 963 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 TAGAPQ8N103 731 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 WDR62O43379 1518 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 TARSL2A2RTX5 802 aaKnown RBP7.95□□□□□ -1.14
SYNE2-205ENST00000394768 USP17L12C9JPN9 530 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 USP17L21D6R901 530 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 CIAO1O76071 339 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 ALDH1A2O94788 518 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 ARHGAP31Q2M1Z3 1444 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 FOXP3Q9BZS1 431 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 GPATCH8Q9UKJ3 1502 aaKnown RBP7.95□□□□□ -1.14
SYNE2-205ENST00000394768 UBE4BO95155 1302 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 TIMM10P62072 90 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 CENPPQ6IPU0 288 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 LRRC47Q8N1G4 583 aaKnown RBP7.94□□□□□ -1.14
SYNE2-205ENST00000394768 TNKSO95271 1327 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 ATP7AQ04656 1500 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 PRR23D1E9PI22 279 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-205ENST00000394768 SPAG7O75391 227 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 PRR23D2P0DMB1 279 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-205ENST00000394768 PSMA2P25787 234 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 ARPP19P56211 112 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 ARL4CP56559 192 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 TMED2Q15363 201 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 C16orf87Q6PH81 154 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 TMEM60Q9H2L4 133 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 SP110Q9HB58 689 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 DIABLOQ9NR28 239 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 PSD3Q9NYI0 1048 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 MIF4GDA9UHW6 222 aaKnown RBP7.94□□□□□ -1.14
SYNE2-205ENST00000394768 VAMP4O75379 141 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 RXRBP28702 533 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 MESDQ14696 234 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 ASAP3Q8TDY4 903 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 EYA1Q99502 592 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 TUBGCP2Q9BSJ2 902 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 ZBTB40Q9NUA8 1239 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 EPN1Q9Y6I3 576 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-205ENST00000394768 AATKQ6ZMQ8 1374 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 DPYDQ12882 1025 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 MSTO1Q9BUK6 570 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 ABCF3Q9NUQ8 709 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 SPACA6W5XKT8 324 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 ADCY9O60503 1353 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 ZMYM4Q5VZL5 1548 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 A0A1W2PP64 1363 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 GUCA1AP43080 201 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-205ENST00000394768 ANXA11P50995 505 aaKnown RBP7.94□□□□□ -1.14
SYNE2-205ENST00000394768 MRPL28Q13084 256 aaKnown RBP7.94□□□□□ -1.14
SYNE2-205ENST00000394768 SEMA3FQ13275 785 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 TRIML2Q8N7C3 387 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 ZNF560Q96MR9 790 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 H0Y626 953 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 PRPF4O43172 522 aaKnown RBP eCLIP7.94□□□□□ -1.14
SYNE2-205ENST00000394768 TRIM16O95361 564 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 SFNP31947 248 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 KIF23Q02241 960 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-205ENST00000394768 STXBP2Q15833 593 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 MB21D1Q8N884 522 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 OSCP1Q8WVF1 389 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 MRPL48Q96GC5 212 aaKnown RBP7.94□□□□□ -1.14
SYNE2-205ENST00000394768 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.94□□□□□ -1.14
SYNE2-205ENST00000394768 UVRAGQ9P2Y5 699 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 USP19O94966 1318 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 LBRQ14739 615 aaKnown RBP7.94□□□□□ -1.14
SYNE2-205ENST00000394768 SKIV2LQ15477 1246 aaKnown RBP7.94□□□□□ -1.14
SYNE2-205ENST00000394768 ELF2Q15723 593 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms