RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 PRLRP16471 622 aa17.51■□□□□ 0.39
PCDH1-203ENST00000394536 ABCB5Q2M3G0 1257 aa17.51■□□□□ 0.39
PCDH1-203ENST00000394536 CYP11B2P19099 503 aa17.51■□□□□ 0.39
PCDH1-203ENST00000394536 TTMPQ5BVD1 217 aa17.51■□□□□ 0.39
PCDH1-203ENST00000394536 NSMFQ6X4W1 530 aa17.51■□□□□ 0.39
PCDH1-203ENST00000394536 MDM1Q8TC05 714 aa17.51■□□□□ 0.39
PCDH1-203ENST00000394536 SCFD1Q8WVM8 642 aa17.51■□□□□ 0.39
PCDH1-203ENST00000394536 STMN4Q9H169 189 aaPredicted RBP17.51■□□□□ 0.39
PCDH1-203ENST00000394536 NAGPAQ9UK23 515 aa17.51■□□□□ 0.39
PCDH1-203ENST00000394536 GOLGA8IPA6NC78 632 aa17.51■□□□□ 0.39
PCDH1-203ENST00000394536 GOLGA8JA6NMD2 632 aa17.51■□□□□ 0.39
PCDH1-203ENST00000394536 POTEJP0CG39 1038 aa17.51■□□□□ 0.39
PCDH1-203ENST00000394536 MYCLP12524 364 aaPredicted RBP17.51■□□□□ 0.39
PCDH1-203ENST00000394536 ITGA4P13612 1032 aa17.51■□□□□ 0.39
PCDH1-203ENST00000394536 PSMC6P62333 389 aa17.51■□□□□ 0.39
PCDH1-203ENST00000394536 CCDC38Q502W7 563 aa17.51■□□□□ 0.39
PCDH1-203ENST00000394536 ELAC2Q9BQ52 826 aaKnown RBP17.51■□□□□ 0.39
PCDH1-203ENST00000394536 PARVGQ9HBI0 331 aa17.51■□□□□ 0.39
PCDH1-203ENST00000394536 CCDC188H7C350 402 aa17.5■□□□□ 0.39
PCDH1-203ENST00000394536 AGPSO00116 658 aa17.5■□□□□ 0.39
PCDH1-203ENST00000394536 MED24O75448 989 aa17.5■□□□□ 0.39
PCDH1-203ENST00000394536 BBOX1O75936 387 aa17.5■□□□□ 0.39
PCDH1-203ENST00000394536 HSD17B3P37058 310 aa17.5■□□□□ 0.39
PCDH1-203ENST00000394536 PPP4CP60510 307 aa17.5■□□□□ 0.39
PCDH1-203ENST00000394536 KCNMA1Q12791 1236 aa17.5■□□□□ 0.39
PCDH1-203ENST00000394536 ZNF571Q7Z3V5 609 aaPredicted RBP17.5■□□□□ 0.39
PCDH1-203ENST00000394536 GLG1Q92896 1179 aa17.5■□□□□ 0.39
PCDH1-203ENST00000394536 TBK1Q9UHD2 729 aa17.5■□□□□ 0.39
PCDH1-203ENST00000394536 GGT7Q9UJ14 662 aa17.5■□□□□ 0.39
PCDH1-203ENST00000394536 C5P01031 1676 aa17.5■□□□□ 0.39
PCDH1-203ENST00000394536 GRID2IPA4D2P6 1211 aa17.5■□□□□ 0.39
PCDH1-203ENST00000394536 FGRP09769 529 aa17.5■□□□□ 0.39
PCDH1-203ENST00000394536 C10orf76Q5T2E6 689 aa17.5■□□□□ 0.39
PCDH1-203ENST00000394536 PPP4R3CPQ6ZMV5 832 aa17.5■□□□□ 0.39
PCDH1-203ENST00000394536 CCDC17Q96LX7 622 aa17.5■□□□□ 0.39
PCDH1-203ENST00000394536 RTFDC1Q9BY42 306 aaPredicted RBP17.5■□□□□ 0.39
PCDH1-203ENST00000394536 RGPD5Q99666 1765 aa17.5■□□□□ 0.39
PCDH1-203ENST00000394536 GPR75-ASB3A0A0A6YYF3 556 aa17.5■□□□□ 0.39
PCDH1-203ENST00000394536 DLATP10515 647 aaKnown RBP17.5■□□□□ 0.39
PCDH1-203ENST00000394536 HARSP12081 509 aaKnown RBP17.5■□□□□ 0.39
PCDH1-203ENST00000394536 HNRNPH1P31943 449 aaKnown RBP17.5■□□□□ 0.39
PCDH1-203ENST00000394536 NEK9Q8TD19 979 aa17.5■□□□□ 0.39
PCDH1-203ENST00000394536 SPATA31A1Q5TZJ5 1347 aa17.49■□□□□ 0.39
PCDH1-203ENST00000394536 EVI5O60447 810 aa17.49■□□□□ 0.39
PCDH1-203ENST00000394536 ACSL3O95573 720 aa17.49■□□□□ 0.39
PCDH1-203ENST00000394536 PPP2R2AP63151 447 aa17.49■□□□□ 0.39
PCDH1-203ENST00000394536 BIRC3Q13489 604 aa17.49■□□□□ 0.39
PCDH1-203ENST00000394536 CATSPER3Q86XQ3 398 aa17.49■□□□□ 0.39
PCDH1-203ENST00000394536 CCDC197Q8NCU1 140 aa17.49■□□□□ 0.39
PCDH1-203ENST00000394536 LRRC15Q8TF66 581 aa17.49■□□□□ 0.39
PCDH1-203ENST00000394536 TCP10L2B9ZVM9 353 aa17.49■□□□□ 0.39
PCDH1-203ENST00000394536 F5H6K3 240 aa17.49■□□□□ 0.39
PCDH1-203ENST00000394536 SORBS3O60504 671 aa17.49■□□□□ 0.39
PCDH1-203ENST00000394536 GCLMP48507 274 aa17.49■□□□□ 0.39
PCDH1-203ENST00000394536 KLRC3Q07444 240 aa17.49■□□□□ 0.39
PCDH1-203ENST00000394536 BAP1Q92560 729 aa17.49■□□□□ 0.39
PCDH1-203ENST00000394536 CCDC77Q9BR77 488 aa17.49■□□□□ 0.39
PCDH1-203ENST00000394536 FGFBP2Q9BYJ0 223 aa17.49■□□□□ 0.39
PCDH1-203ENST00000394536 PLEKHG2Q9H7P9 1386 aa17.49■□□□□ 0.39
PCDH1-203ENST00000394536 ZNF365Q70YC5 407 aa17.49■□□□□ 0.39
PCDH1-203ENST00000394536 TTYH3Q9C0H2 523 aa17.49■□□□□ 0.39
PCDH1-203ENST00000394536 FOSP01100 380 aaPredicted RBP17.48■□□□□ 0.39
PCDH1-203ENST00000394536 GH2P01242 217 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 FECHP22830 423 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 LRRC55Q6ZSA7 311 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 SLC35G2Q8TBE7 412 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 DYDC2Q96IM9 177 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 OSGEPQ9NPF4 335 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 LARSQ9P2J5 1176 aaKnown RBP17.48■□□□□ 0.39
PCDH1-203ENST00000394536 UBAP1LF5GYI3 381 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 BMP3P12645 472 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 USP11P51784 963 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 PTGISQ16647 500 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 SLC35G1Q2M3R5 365 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 TRIM59Q8IWR1 403 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 MYCBPQ99417 103 aaPredicted RBP17.48■□□□□ 0.39
PCDH1-203ENST00000394536 TYW1Q9NV66 732 aaKnown RBP17.48■□□□□ 0.39
PCDH1-203ENST00000394536 NKIRAS1Q9NYS0 192 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 MMEP08473 750 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 LRRC14Q15048 493 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 ECM1Q16610 540 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 SLC10A5Q5PT55 438 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 TBC1D16Q8TBP0 767 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 FAM212AQ96EL1 285 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 PSMD1Q99460 953 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 USP21Q9UK80 565 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 PNMA2Q9UL42 364 aa17.48■□□□□ 0.39
PCDH1-203ENST00000394536 MYH2Q9UKX2 1941 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 CLRN2A0PK11 232 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 RASSF10A6NK89 507 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 AKAP3O75969 853 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 CLNS1AP54105 237 aaKnown RBP17.47■□□□□ 0.39
PCDH1-203ENST00000394536 ORC2Q13416 577 aaPredicted RBP17.47■□□□□ 0.39
PCDH1-203ENST00000394536 MIER3Q7Z3K6 550 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 TBC1D1Q86TI0 1168 aaPredicted RBP17.47■□□□□ 0.39
PCDH1-203ENST00000394536 MYCBPAPQ8TBZ2 947 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 ZNF577Q9BSK1 485 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 TUBGCP6Q96RT7 1819 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 ZNF233A6NK53 670 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 PPEF1O14829 653 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms