RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 GORASP1Q9BQQ3 440 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 SPZ1Q9BXG8 430 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 TMEM60Q9H2L4 133 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 EVI5O60447 810 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 RBM5P52756 815 aaKnown RBP eCLIP20.51■□□□□ 0.87
HOXC6-202ENST00000394331 SLC35G1Q2M3R5 365 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 KRT71Q3SY84 523 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 LMNTD2Q8IXW0 634 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 CSGALNACT2Q8N6G5 542 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 SCFD2Q8WU76 684 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 SEC14L1Q92503 715 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 PBKQ96KB5 322 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 AK8Q96MA6 479 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 LUC7LQ9NQ29 371 aaKnown RBP20.51■□□□□ 0.87
HOXC6-202ENST00000394331 WDR35Q9P2L0 1181 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 MAPK8IP1Q9UQF2 711 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 DCDC2CA8MYV0 355 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 F8VZ95 297 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 MMEP08473 750 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 BNIP1Q12981 228 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 KRT25Q7Z3Z0 450 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 FAM81AQ8TBF8 368 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 UBLCP1Q8WVY7 318 aaPredicted RBP20.5■□□□□ 0.87
HOXC6-202ENST00000394331 CNOT6LQ96LI5 555 aaKnown RBP20.5■□□□□ 0.87
HOXC6-202ENST00000394331 EPAS1Q99814 870 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 KBTBD4Q9NVX7 518 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 ADAM22Q9P0K1 906 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 KLRF2D3W0D1 207 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 PPFIA2O75334 1257 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 TRAPPC3LQ5T215 181 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 MAPKAPK5Q8IW41 473 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 SLC44A5Q8NCS7 719 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 TEKT4Q8WW24 435 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 NOC4LQ9BVI4 516 aaKnown RBP20.5■□□□□ 0.87
HOXC6-202ENST00000394331 ZMYND12Q9H0C1 365 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 SIK3Q9Y2K2 1263 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 IGF2BP3O00425 579 aaKnown RBP eCLIP20.5■□□□□ 0.87
HOXC6-202ENST00000394331 IMPDH2P12268 514 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 MSH2P43246 934 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 NAB2Q15742 525 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 GNPTABQ3T906 1256 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 FAM133BQ5BKY9 247 aaKnown RBP20.5■□□□□ 0.87
HOXC6-202ENST00000394331 ASRGL1Q7L266 308 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 CNBD1Q8NA66 436 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 PGM2Q96G03 612 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 RTFDC1Q9BY42 306 aaPredicted RBP20.5■□□□□ 0.87
HOXC6-202ENST00000394331 ECT2Q9H8V3 914 aa20.5■□□□□ 0.87
HOXC6-202ENST00000394331 COPS2P61201 443 aa20.49■□□□□ 0.87
HOXC6-202ENST00000394331 NFIXQ14938 502 aa20.49■□□□□ 0.87
HOXC6-202ENST00000394331 ANO7Q6IWH7 933 aa20.49■□□□□ 0.87
HOXC6-202ENST00000394331 ATL2Q8NHH9 583 aa20.49■□□□□ 0.87
HOXC6-202ENST00000394331 ABCB11O95342 1321 aa20.49■□□□□ 0.87
HOXC6-202ENST00000394331 PLCG2P16885 1265 aa20.49■□□□□ 0.87
HOXC6-202ENST00000394331 CCNE1P24864 410 aa20.49■□□□□ 0.87
HOXC6-202ENST00000394331 GNA11P29992 359 aa20.49■□□□□ 0.87
HOXC6-202ENST00000394331 SKIV2L2P42285 1042 aaKnown RBP20.49■□□□□ 0.87
HOXC6-202ENST00000394331 MAGEA8P43361 318 aa20.49■□□□□ 0.87
HOXC6-202ENST00000394331 MXRA7P84157 204 aa20.49■□□□□ 0.87
HOXC6-202ENST00000394331 GRIK5Q16478 980 aa20.49■□□□□ 0.87
HOXC6-202ENST00000394331 SPICE1Q8N0Z3 855 aa20.49■□□□□ 0.87
HOXC6-202ENST00000394331 ACTRT1Q8TDG2 376 aa20.49■□□□□ 0.87
HOXC6-202ENST00000394331 MTMR7Q9Y216 660 aa20.49■□□□□ 0.87
HOXC6-202ENST00000394331 ZBTB12Q9Y330 459 aaPredicted RBP20.49■□□□□ 0.87
HOXC6-202ENST00000394331 KLRC4O43908 158 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 UBOX5O94941 541 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 CHN1P15882 459 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 GNAZP19086 355 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 SMARCA1P28370 1054 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 DYNC1I2Q13409 638 aaKnown RBP20.48■□□□□ 0.87
HOXC6-202ENST00000394331 CUL3Q13618 768 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 TRIM74Q86UV6 250 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 TRIM73Q86UV7 250 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 NEDD1Q8NHV4 660 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 C8orf37Q96NL8 207 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 EYA3Q99504 573 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 C6orf50Q9HD87 102 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 SAP30BPQ9UHR5 308 aaKnown RBP20.48■□□□□ 0.87
HOXC6-202ENST00000394331 PP2D1A8MPX8 630 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 PALMO75781 387 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 BTDP43251 543 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 NAPAP54920 295 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 RASSF7Q02833 373 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 C16orf86Q6ZW13 317 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 CCDC84Q86UT8 332 aaPredicted RBP20.48■□□□□ 0.87
HOXC6-202ENST00000394331 AMIGO3Q86WK7 504 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 RBM12BQ8IXT5 1001 aaKnown RBP20.48■□□□□ 0.87
HOXC6-202ENST00000394331 LRRC34Q8IZ02 419 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 ABCF3Q9NUQ8 709 aa20.48■□□□□ 0.87
HOXC6-202ENST00000394331 O00370 1275 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 ATP6V1C1P21283 382 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 MTIF2P46199 727 aaKnown RBP20.47■□□□□ 0.87
HOXC6-202ENST00000394331 CDK8P49336 464 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 NONOQ15233 471 aaKnown RBP eCLIP20.47■□□□□ 0.87
HOXC6-202ENST00000394331 P2RX5Q93086 422 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 KLHL29Q96CT2 875 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 FAM167BQ9BTA0 163 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 LTBP4Q8N2S1 1624 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 CCDC188H7C350 402 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 NUDT17P0C025 328 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 OR52Z1P0C646 297 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms