RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 FBXL16Q8N461 479 aa8.81□□□□□ -1
ATXN3-203ENST00000393287 TYW1Q9NV66 732 aaKnown RBP8.81□□□□□ -1
ATXN3-203ENST00000393287 GABBR1Q9UBS5 961 aa8.81□□□□□ -1
ATXN3-203ENST00000393287 CCDC66A2RUB6 948 aa8.81□□□□□ -1
ATXN3-203ENST00000393287 ALDH3A1P30838 453 aa8.81□□□□□ -1
ATXN3-203ENST00000393287 MCM6Q14566 821 aa8.81□□□□□ -1
ATXN3-203ENST00000393287 NAALADL2Q58DX5 795 aa8.81□□□□□ -1
ATXN3-203ENST00000393287 DSTYKQ6XUX3 929 aa8.81□□□□□ -1
ATXN3-203ENST00000393287 RRAGAQ7L523 313 aa8.81□□□□□ -1
ATXN3-203ENST00000393287 TADA2BQ86TJ2 420 aa8.81□□□□□ -1
ATXN3-203ENST00000393287 CCDC97Q96F63 343 aaPredicted RBP8.81□□□□□ -1
ATXN3-203ENST00000393287 POLR3FQ9H1D9 316 aaPredicted RBP8.81□□□□□ -1
ATXN3-203ENST00000393287 SLC38A7Q9NVC3 462 aa8.81□□□□□ -1
ATXN3-203ENST00000393287 ZKSCAN5Q9Y2L8 839 aa8.81□□□□□ -1
ATXN3-203ENST00000393287 UTP11Q9Y3A2 253 aaKnown RBP8.81□□□□□ -1
ATXN3-203ENST00000393287 FAM193AP78312 1265 aa8.81□□□□□ -1
ATXN3-203ENST00000393287 MAP2K1Q02750 393 aaPredicted RBP8.81□□□□□ -1
ATXN3-203ENST00000393287 NR5A1Q13285 461 aa8.81□□□□□ -1
ATXN3-203ENST00000393287 NIPA1Q7RTP0 329 aa8.81□□□□□ -1
ATXN3-203ENST00000393287 C7orf43Q8WVR3 580 aa8.81□□□□□ -1
ATXN3-203ENST00000393287 ATG4CQ96DT6 458 aa8.81□□□□□ -1
ATXN3-203ENST00000393287 C16orf45Q96MC5 204 aaPredicted RBP8.81□□□□□ -1
ATXN3-203ENST00000393287 MOV10L1Q9BXT6 1211 aaKnown RBP8.81□□□□□ -1
ATXN3-203ENST00000393287 ZMYND12Q9H0C1 365 aa8.81□□□□□ -1
ATXN3-203ENST00000393287 MKRN1Q9UHC7 482 aaKnown RBP8.81□□□□□ -1
ATXN3-203ENST00000393287 SLC8A2Q9UPR5 921 aa8.81□□□□□ -1
ATXN3-203ENST00000393287 ZNF365Q70YC5 407 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 ANKS1AQ92625 1134 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 MAN1B1Q9UKM7 699 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 PPP1R9AQ9ULJ8 1098 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 KIF28PB7ZC32 967 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 TRAPPC3O43617 180 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 NR3C2P08235 984 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 XRCC6P12956 609 aaKnown RBP eCLIP8.8□□□□□ -1
ATXN3-203ENST00000393287 EEPD1Q7L9B9 569 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 ADGRA1Q86SQ6 560 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 SESTD1Q86VW0 696 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 EIF2AK1Q9BQI3 630 aaKnown RBP8.8□□□□□ -1
ATXN3-203ENST00000393287 LXNQ9BS40 222 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 MAPK8IP1Q9UQF2 711 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 SYNGAP1Q96PV0 1343 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 CLDN3O15551 220 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 IL18RAPO95256 599 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 DSG3P32926 999 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 PPFIA1Q13136 1202 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 PRPSAP1Q14558 356 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 NOLC1Q14978 699 aaKnown RBP eCLIP8.8□□□□□ -1
ATXN3-203ENST00000393287 STILQ15468 1287 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 DCAF4L1Q3SXM0 396 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 HSP90AA4PQ58FG1 418 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 SWSAP1Q6NVH7 229 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 ERAP1Q9NZ08 941 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 FAM198AQ9UFP1 575 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 SALL3Q9BXA9 1300 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 SNAP25P60880 206 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 KCNB1Q14721 858 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 ARHGAP44Q17R89 818 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 SRBD1Q8N5C6 995 aaKnown RBP8.8□□□□□ -1
ATXN3-203ENST00000393287 POLR3CQ9BUI4 534 aaPredicted RBP8.8□□□□□ -1
ATXN3-203ENST00000393287 GADD45BO75293 160 aaPredicted RBP8.8□□□□□ -1
ATXN3-203ENST00000393287 RNF8O76064 485 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 U2AF2P26368 475 aaKnown RBP eCLIP8.8□□□□□ -14e-7■■■□□ 17.3
ATXN3-203ENST00000393287 MXI1P50539 228 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 RPS6KA1Q15418 735 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 LGSNQ5TDP6 509 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 CNPY4Q8N129 248 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 TUBGCP2Q9BSJ2 902 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 DDX4Q9NQI0 724 aaKnown RBP8.8□□□□□ -1
ATXN3-203ENST00000393287 MYO1AQ9UBC5 1043 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 SCINQ9Y6U3 715 aa8.8□□□□□ -1
ATXN3-203ENST00000393287 A6NJR5 290 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 SUPT20HL2P0C7V6 817 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 PTPRAP18433 802 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 CDC27P30260 824 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 BFSP2Q13515 415 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 FAM173BQ6P4H8 233 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 MAATS1Q7Z4T9 603 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 WDR18Q9BV38 432 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 JMJD4Q9H9V9 463 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 DNAI1Q9UI46 699 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 MAD2L2Q9UI95 211 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 TCRBV5S4A2TA0A5A2 114 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 MSCO60682 206 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 CABYRO75952 493 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 SHMT1P34896 483 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 BAATQ14032 418 aaPredicted RBP8.79□□□□□ -1
ATXN3-203ENST00000393287 USP17L6PQ6QN14 398 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 ANKRD23Q86SG2 305 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 ACER1Q8TDN7 264 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 IFIH1Q9BYX4 1025 aaKnown RBP8.79□□□□□ -1
ATXN3-203ENST00000393287 CCSER1Q9C0I3 900 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 FAM107BQ9H098 131 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 TSPYL1Q9H0U9 437 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 BHMT2Q9H2M3 363 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 INCENPQ9NQS7 918 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 AAASQ9NRG9 546 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 IPO11Q9UI26 975 aaKnown RBP8.79□□□□□ -1
ATXN3-203ENST00000393287 CNTNAP5Q8WYK1 1306 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 STAG3L1P0CL83 205 aa8.79□□□□□ -1
ATXN3-203ENST00000393287 YWHABP31946 246 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms