RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 CDK7P50613 346 aa15.12■□□□□ 0.01
PTN-202ENST00000393083 PSMC6P62333 389 aa15.12■□□□□ 0.01
PTN-202ENST00000393083 ECM1Q16610 540 aa15.12■□□□□ 0.01
PTN-202ENST00000393083 POTEBQ6S5H4 581 aa15.12■□□□□ 0.01
PTN-202ENST00000393083 DHX40Q8IX18 779 aaKnown RBP15.12■□□□□ 0.01
PTN-202ENST00000393083 SLC43A3Q8NBI5 491 aa15.12■□□□□ 0.01
PTN-202ENST00000393083 JPH1Q9HDC5 661 aaPredicted RBP15.12■□□□□ 0.01
PTN-202ENST00000393083 BLOC1S4Q9NUP1 217 aa15.12■□□□□ 0.01
PTN-202ENST00000393083 DACH1Q9UI36 760 aa15.12■□□□□ 0.01
PTN-202ENST00000393083 A0A0U1RQG5 324 aaPredicted RBP15.11■□□□□ 0.01
PTN-202ENST00000393083 GSTTP1A0A1W2PQM5 241 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 NOP56O00567 594 aaKnown RBP15.11■□□□□ 0.01
PTN-202ENST00000393083 CHMP2AO43633 222 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 MED24O75448 989 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 BMP6P22004 513 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 AMPD3Q01432 767 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 SP4Q02446 784 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 PPP2R5CQ13362 524 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 DHX8Q14562 1220 aaKnown RBP15.11■□□□□ 0.01
PTN-202ENST00000393083 MCM6Q14566 821 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 SV2BQ7L1I2 683 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 KCNK18Q7Z418 384 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 C16orf70Q9BSU1 422 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 TBC1D22BQ9NU19 505 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 RMND1Q9NWS8 449 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 SLC9A2Q9UBY0 812 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 TNRC18O15417 2968 aaPredicted RBP15.11■□□□□ 0.01
PTN-202ENST00000393083 ARVCFO00192 962 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 EML1O00423 815 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 CCNE2O96020 404 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 F2P00734 622 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 ZNF286BP0CG31 522 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 RTP1P59025 263 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 CCDC173Q0VFZ6 552 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 ITGA7Q13683 1181 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 TRIM60Q495X7 471 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 MLKLQ8NB16 471 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 SEPT1Q8WYJ6 367 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 VTI1AQ96AJ9 217 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 RIT2Q99578 217 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 UNC45AQ9H3U1 944 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 KIAA1024Q9UPX6 916 aa15.11■□□□□ 0.01
PTN-202ENST00000393083 ALPK3Q96L96 1907 aa15.1■□□□□ 0.01
PTN-202ENST00000393083 SCN10AQ9Y5Y9 1956 aa15.1■□□□□ 0.01
PTN-202ENST00000393083 MYH11P35749 1972 aa15.1■□□□□ 0.01
PTN-202ENST00000393083 DDX39AO00148 427 aaKnown RBP15.1■□□□□ 0.01
PTN-202ENST00000393083 HAS3O00219 553 aa15.1■□□□□ 0.01
PTN-202ENST00000393083 ATG7O95352 703 aa15.1■□□□□ 0.01
PTN-202ENST00000393083 LGALS2P05162 132 aa15.1■□□□□ 0.01
PTN-202ENST00000393083 RPA1P27694 616 aa15.1■□□□□ 0.01
PTN-202ENST00000393083 TCF7P36402 384 aaPredicted RBP15.1■□□□□ 0.01
PTN-202ENST00000393083 ACTR2P61160 394 aa15.1■□□□□ 0.01
PTN-202ENST00000393083 ASIC1P78348 528 aa15.1■□□□□ 0.01
PTN-202ENST00000393083 PLCB2Q00722 1185 aa15.1■□□□□ 0.01
PTN-202ENST00000393083 NBPF20Q3BBV1 942 aa15.1■□□□□ 0.01
PTN-202ENST00000393083 POTEGQ6S5H5 508 aa15.1■□□□□ 0.01
PTN-202ENST00000393083 ANKRD33Q7Z3H0 272 aa15.1■□□□□ 0.01
PTN-202ENST00000393083 C7orf25Q9BPX7 421 aa15.1■□□□□ 0.01
PTN-202ENST00000393083 EIF2AK1Q9BQI3 630 aaKnown RBP15.1■□□□□ 0.01
PTN-202ENST00000393083 TRIM9Q9C026 710 aa15.1■□□□□ 0.01
PTN-202ENST00000393083 CYP4A11Q02928 519 aa15.09■□□□□ 0.01
PTN-202ENST00000393083 TLE2Q04725 743 aa15.09■□□□□ 0.01
PTN-202ENST00000393083 CATSPER3Q86XQ3 398 aa15.09■□□□□ 0.01
PTN-202ENST00000393083 DPF3Q92784 378 aa15.09■□□□□ 0.01
PTN-202ENST00000393083 CCDC47Q96A33 483 aaKnown RBP15.09■□□□□ 0.01
PTN-202ENST00000393083 PCYT2Q99447 389 aa15.09■□□□□ 0.01
PTN-202ENST00000393083 POLR3CQ9BUI4 534 aaPredicted RBP15.09■□□□□ 0.01
PTN-202ENST00000393083 SEZ6LQ9BYH1 1024 aa15.09■□□□□ 0.01
PTN-202ENST00000393083 LRRC27Q9C0I9 530 aa15.09■□□□□ 0.01
PTN-202ENST00000393083 IGKV6D-21A0A0A0MT36 114 aa15.08■□□□□ 0
PTN-202ENST00000393083 SMTNL1A8MU46 457 aa15.08■□□□□ 0
PTN-202ENST00000393083 E9PMD0 336 aa15.08■□□□□ 0
PTN-202ENST00000393083 KLRC4O43908 158 aa15.08■□□□□ 0
PTN-202ENST00000393083 EVI5O60447 810 aa15.08■□□□□ 0
PTN-202ENST00000393083 LGR5O75473 907 aa15.08■□□□□ 0
PTN-202ENST00000393083 SPATA31C1P0DKV0 1188 aa15.08■□□□□ 0
PTN-202ENST00000393083 PSEN2P49810 448 aa15.08■□□□□ 0
PTN-202ENST00000393083 KCNB1Q14721 858 aa15.08■□□□□ 0
PTN-202ENST00000393083 MFSD10Q14728 455 aa15.08■□□□□ 0
PTN-202ENST00000393083 KMT5BQ4FZB7 885 aa15.08■□□□□ 0
PTN-202ENST00000393083 UTP14CQ5TAP6 766 aaKnown RBP15.08■□□□□ 0
PTN-202ENST00000393083 ZNF658Q5TYW1 1059 aaPredicted RBP15.08■□□□□ 0
PTN-202ENST00000393083 ZNF746Q6NUN9 644 aaPredicted RBP15.08■□□□□ 0
PTN-202ENST00000393083 NFRKBQ6P4R8 1299 aa15.08■□□□□ 0
PTN-202ENST00000393083 B3GNT9Q6UX72 402 aa15.08■□□□□ 0
PTN-202ENST00000393083 ABHD15Q6UXT9 468 aa15.08■□□□□ 0
PTN-202ENST00000393083 TRIM50Q86XT4 487 aa15.08■□□□□ 0
PTN-202ENST00000393083 PPP1R13LQ8WUF5 828 aa15.08■□□□□ 0
PTN-202ENST00000393083 TOX2Q96NM4 488 aa15.08■□□□□ 0
PTN-202ENST00000393083 TUFT1Q9NNX1 390 aa15.08■□□□□ 0
PTN-202ENST00000393083 ATP11BQ9Y2G3 1177 aa15.08■□□□□ 0
PTN-202ENST00000393083 ARID2Q68CP9 1835 aa15.08■□□□□ 0
PTN-202ENST00000393083 MYH9P35579 1960 aaKnown RBP15.08■□□□□ 0
PTN-202ENST00000393083 MYMKA6NI61 221 aa15.07■□□□□ 0
PTN-202ENST00000393083 H3BRB1 525 aa15.07■□□□□ 0
PTN-202ENST00000393083 IKBKBO14920 756 aa15.07■□□□□ 0
PTN-202ENST00000393083 SSBP05455 408 aaKnown RBP eCLIP15.07■□□□□ 0
PTN-202ENST00000393083 PLA2G4BP0C869 781 aa15.07■□□□□ 0
PTN-202ENST00000393083 TPM4P67936 248 aa15.07■□□□□ 0
PTN-202ENST00000393083 KRT76Q01546 638 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms