RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 BHMT2Q9H2M3 363 aa20.49■□□□□ 0.87
PPFIA1-202ENST00000389547 NHEJ1Q9H9Q4 299 aaPredicted RBP20.49■□□□□ 0.87
PPFIA1-202ENST00000389547 POTEB3A0JP26 581 aa20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 POTECB2RU33 542 aa20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 KCNK3O14649 394 aa20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 NBPF12Q5TAG4 269 aaPredicted RBP20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 POTEBQ6S5H4 581 aa20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 MPHOSPH6Q99547 160 aaKnown RBP20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 TRIM49BA6NDI0 452 aa20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 LUC7L3O95232 432 aaKnown RBP20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 PSMD2Q13200 908 aa20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 IFI16Q16666 785 aaKnown RBP20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 OTUD5Q96G74 571 aa20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 TEKT3Q9BXF9 490 aa20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 RIC8AQ9NPQ8 531 aa20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 GINS2Q9Y248 185 aa20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 RABGAP1Q9Y3P9 1069 aa20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 IVNS1ABPQ9Y6Y0 642 aa20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 MYH14Q7Z406 1995 aaKnown RBP20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 A0A1B0GTH6 734 aa20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 CETN1Q12798 172 aa20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 RNF10Q8N5U6 811 aaKnown RBP20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 CCDC26Q8TAB7 109 aa20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 KCNV2Q8TDN2 545 aa20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 NUCKS1Q9H1E3 243 aaKnown RBP20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 VCPKMTQ9H867 229 aa20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 XIRP1Q702N8 1843 aaKnown RBP20.48■□□□□ 0.87
PPFIA1-202ENST00000389547 KIF3CO14782 793 aa20.47■□□□□ 0.87
PPFIA1-202ENST00000389547 SESN3P58005 492 aa20.47■□□□□ 0.87
PPFIA1-202ENST00000389547 SETDB1Q15047 1291 aa20.47■□□□□ 0.87
PPFIA1-202ENST00000389547 NFRKBQ6P4R8 1299 aa20.47■□□□□ 0.87
PPFIA1-202ENST00000389547 HOOK3Q86VS8 718 aa20.47■□□□□ 0.87
PPFIA1-202ENST00000389547 VCXQ9H320 206 aa20.47■□□□□ 0.87
PPFIA1-202ENST00000389547 SMARCAL1Q9NZC9 954 aa20.47■□□□□ 0.87
PPFIA1-202ENST00000389547 TTC26A0AVF1 554 aa20.47■□□□□ 0.87
PPFIA1-202ENST00000389547 YDJCA8MPS7 323 aa20.47■□□□□ 0.87
PPFIA1-202ENST00000389547 SYF2O95926 243 aaKnown RBP20.47■□□□□ 0.87
PPFIA1-202ENST00000389547 SMTNP53814 917 aa20.47■□□□□ 0.87
PPFIA1-202ENST00000389547 DAAM2Q86T65 1068 aa20.47■□□□□ 0.87
PPFIA1-202ENST00000389547 SGSM3Q96HU1 749 aa20.47■□□□□ 0.87
PPFIA1-202ENST00000389547 COL1A1P02452 1464 aaPredicted RBP20.47■□□□□ 0.87
PPFIA1-202ENST00000389547 PSEN1P49768 467 aa20.47■□□□□ 0.87
PPFIA1-202ENST00000389547 RPS6KA1Q15418 735 aa20.47■□□□□ 0.87
PPFIA1-202ENST00000389547 RPAP3Q9H6T3 665 aaPredicted RBP20.47■□□□□ 0.87
PPFIA1-202ENST00000389547 CCDC160A6NGH7 325 aa20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 MDH1P40925 334 aaKnown RBP20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 SPATA4Q8NEY3 305 aa20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 A0A1W2PRG0 241 aa20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 POTEFA5A3E0 1075 aa20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 NOP56O00567 594 aaKnown RBP20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 POTEIP0CG38 1075 aa20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 MTMR3Q13615 1198 aa20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 XKR9Q5GH70 373 aa20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 SNRNP48Q6IEG0 339 aaKnown RBP20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 POTEGQ6S5H5 508 aa20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 POTEEQ6S8J3 1075 aa20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 RMDN3Q96TC7 470 aa20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 SH2D3AQ9BRG2 576 aa20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 ABCB11O95342 1321 aa20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 DDNO94850 711 aaPredicted RBP20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 PLA2G4BP0C869 781 aa20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 NSMCE1Q8WV22 266 aa20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 ZIM3Q96PE6 472 aa20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 NUP98P52948 1817 aa20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 RGS16O15492 202 aaPredicted RBP20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 ZNF658Q5TYW1 1059 aaPredicted RBP20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 UTP11Q9Y3A2 253 aaKnown RBP20.46■□□□□ 0.87
PPFIA1-202ENST00000389547 ITGB4P16144 1822 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 FTCDO95954 541 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 GYPCP04921 128 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 RPL13P26373 211 aaKnown RBP20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 RNF207Q6ZRF8 634 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 SEPT14Q6ZU15 432 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 ANKRD42Q8N9B4 389 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 DDX12PQ92771 950 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 AGBL1Q96MI9 1066 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 STMN4Q9H169 189 aaPredicted RBP20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 MLXIPQ9HAP2 919 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 DIAPH2O60879 1101 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 MUM1Q2TAK8 710 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 KSR1Q8IVT5 923 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 FEM1BQ9UK73 627 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 NCK2O43639 380 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 RANBP1P43487 201 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 CYP2J2P51589 502 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 AP3B2Q13367 1082 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 ATP6V1G3Q96LB4 118 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 ELAC2Q9BQ52 826 aaKnown RBP20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 IDI2Q9BXS1 227 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 TSKSQ9UJT2 592 aa20.45■□□□□ 0.86
PPFIA1-202ENST00000389547 CAP2P40123 477 aa20.44■□□□□ 0.86
PPFIA1-202ENST00000389547 FAM178BQ8IXR5 827 aa20.44■□□□□ 0.86
PPFIA1-202ENST00000389547 CEP120Q8N960 986 aa20.44■□□□□ 0.86
PPFIA1-202ENST00000389547 GLG1Q92896 1179 aa20.44■□□□□ 0.86
PPFIA1-202ENST00000389547 TUBGCP2Q9BSJ2 902 aa20.44■□□□□ 0.86
PPFIA1-202ENST00000389547 RNF146Q9NTX7 359 aa20.44■□□□□ 0.86
PPFIA1-202ENST00000389547 CPP00450 1065 aa20.44■□□□□ 0.86
PPFIA1-202ENST00000389547 PRCPP42785 496 aa20.44■□□□□ 0.86
PPFIA1-202ENST00000389547 CCDC125Q86Z20 511 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms