RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 WFS1O76024 890 aa15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 RNF8O76064 485 aa15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 GNAZP19086 355 aa15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 CNGA1P29973 690 aa15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 MAN2A1Q16706 1144 aa15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 SLC9C1Q4G0N8 1177 aa15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 IFT74Q96LB3 600 aa15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 NSRP1Q9H0G5 558 aaKnown RBP15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 AMACRQ9UHK6 382 aa15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 RTL9Q8NET4 1388 aa15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 SERPING1P05155 500 aa15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 FCER1AP12319 257 aa15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 USP11P51784 963 aa15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 MRPS35P82673 323 aaKnown RBP15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 LBRQ14739 615 aaKnown RBP15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 GBP7Q8N8V2 638 aaPredicted RBP15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 CNBD1Q8NA66 436 aa15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 B4GALNT2Q8NHY0 566 aa15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 PAIP2Q9BPZ3 127 aaKnown RBP15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 EPB41L4BQ9H329 900 aa15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 ATP8A1Q9Y2Q0 1164 aa15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 USP15Q9Y4E8 981 aaPredicted RBP15.94■□□□□ 0.14
VPS9D1-201ENST00000389386 FLOT1O75955 427 aa15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 MYBL1P10243 752 aa15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 SYT15Q9BQS2 421 aa15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 C2CD2Q9Y426 696 aa15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 COL1A1P02452 1464 aaPredicted RBP15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 TNKSO95271 1327 aa15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 CICQ96RK0 1608 aaPredicted RBP15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 BAZ2BQ9UIF8 2168 aaKnown RBP15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 PGRMC1O00264 195 aaKnown RBP15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 ZBTB48P10074 688 aaPredicted RBP15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 PPP1R2P41236 205 aa15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 ADAM9Q13443 819 aa15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 SGSM1Q2NKQ1 1148 aa15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 CENPPQ6IPU0 288 aa15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 FAM84BQ96KN1 310 aaPredicted RBP15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 PACSIN1Q9BY11 444 aa15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 SLITRK6Q9H5Y7 841 aa15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 FAM114A2Q9NRY5 505 aa15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 WDR35Q9P2L0 1181 aa15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 TRIM33Q9UPN9 1127 aa15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 CD2APQ9Y5K6 639 aa15.93■□□□□ 0.14
VPS9D1-201ENST00000389386 CCDC188H7C350 402 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 KRIT1O00522 736 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 TTI1O43156 1089 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 NUDT17P0C025 328 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 ITGA4P13612 1032 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 UBA7P41226 1012 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 PDE6CP51160 858 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 IFI35P80217 286 aaPredicted RBP15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 SLC18A3Q16572 532 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 KLHL23Q8NBE8 558 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 TBC1D5Q92609 795 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 SYN2Q92777 582 aaPredicted RBP15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.92■□□□□ 0.146e-6■■□□□ 11.7
VPS9D1-201ENST00000389386 NKX1-2Q9UD57 310 aaPredicted RBP15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 HIP1RO75146 1068 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 ALDH3A1P30838 453 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 CMPK2Q5EBM0 449 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 DTHD1Q6ZMT9 781 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 ARHGAP27Q6ZUM4 889 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 TXNRD3Q86VQ6 643 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 ZNF384Q8TF68 577 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 GORASP1Q9BQQ3 440 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 TRIM9Q9C026 710 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 CCSER1Q9C0I3 900 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 PNMA3Q9UL41 463 aa15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 NOC2LQ9Y3T9 749 aaKnown RBP15.92■□□□□ 0.14
VPS9D1-201ENST00000389386 ZNF831Q5JPB2 1677 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 A0A087X0T9 212 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 FAM228BP0C875 321 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 IFNAR2P48551 515 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 NLRP5P59047 1200 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 PDIA5Q14554 519 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 SFMBT2Q5VUG0 894 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 LMNTD2Q8IXW0 634 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 NLRP3Q96P20 1036 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 DPH5Q9H2P9 285 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 NLRC4Q9NPP4 1024 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 LMCD1Q9NZU5 365 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 ATP6V0A2Q9Y487 856 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 A0A1B0GVG6 124 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 ATP6V1C1P21283 382 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 KCNMA1Q12791 1236 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 ARHGAP22Q7Z5H3 698 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 FMO2Q99518 471 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 CELF4Q9BZC1 486 aaKnown RBP15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 NACAP1Q9BZK3 213 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 ABCB11O95342 1321 aa15.91■□□□□ 0.14
VPS9D1-201ENST00000389386 MAGEB6P1A0A0J9YX57 407 aa15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 TLDC2A0PJX2 215 aa15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 CCDC169A6NNP5 214 aa15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 COQ9O75208 318 aa15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 PCK1P35558 622 aa15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 NFIXQ14938 502 aa15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 SF3B3Q15393 1217 aaKnown RBP15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 COBLL1Q53SF7 1204 aa15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 CAVIN4Q5BKX8 364 aa15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 SPATA21Q7Z572 469 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms