RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 ESYT3A0FGR9 886 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 SRRM1Q8IYB3 904 aaKnown RBP16.64■□□□□ 0.25
ALK-201ENST00000389048 TRIM11Q96F44 468 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 TRIM15Q9C019 465 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 AP5M1Q9H0R1 490 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 NEUROG2Q9H2A3 272 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 ZNF711Q9Y462 761 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 CYP21A2P08686 494 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 APOA5Q6Q788 366 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 TTC1Q99614 292 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 ECT2Q9H8V3 914 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 STK17AQ9UEE5 414 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 UGGT2Q9NYU1 1516 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 SLC27A3Q5K4L6 730 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 FAM180AQ6UWF9 173 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 EPM2AIP1Q7L775 607 aaPredicted RBP16.64■□□□□ 0.25
ALK-201ENST00000389048 MRPL47Q9HD33 250 aaKnown RBP16.64■□□□□ 0.25
ALK-201ENST00000389048 RWDD2AQ9UIY3 292 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 MYL1P05976 194 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 EIF2AK2P19525 551 aaKnown RBP16.64■□□□□ 0.25
ALK-201ENST00000389048 MCTP2Q6DN12 878 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 GSDMAQ96QA5 445 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 ABCC12Q96J65 1359 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 YEATS2Q9ULM3 1422 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 MYL3P08590 195 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 ERICH1Q86X53 443 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 THNSL1Q8IYQ7 743 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 FOXP1Q9H334 677 aaPredicted RBP16.64■□□□□ 0.25
ALK-201ENST00000389048 CNOT10Q9H9A5 744 aaKnown RBP16.64■□□□□ 0.25
ALK-201ENST00000389048 PALMDQ9NP74 551 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 FGFR1OP2Q9NVK5 253 aa16.64■□□□□ 0.25
ALK-201ENST00000389048 OCM2P0CE71 109 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 OCMP0CE72 109 aaPredicted RBP16.63■□□□□ 0.25
ALK-201ENST00000389048 WDR48Q8TAF3 677 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 ATP6V0A1Q93050 837 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 PNMA2Q9UL42 364 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 MMP1P03956 469 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 MAGOHP61326 146 aaKnown RBP16.63■□□□□ 0.25
ALK-201ENST00000389048 MB21D1Q8N884 522 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 TTC25Q96NG3 672 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 TRIM55Q9BYV6 548 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 RPF1Q9H9Y2 349 aaKnown RBP16.63■□□□□ 0.25
ALK-201ENST00000389048 RAD17O75943 681 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 B4GALNT2Q8NHY0 566 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 FAM161BQ96MY7 647 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 FSD1LQ9BXM9 530 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 KLHL8Q9P2G9 620 aaPredicted RBP16.63■□□□□ 0.25
ALK-201ENST00000389048 DBNLQ9UJU6 430 aaKnown RBP16.63■□□□□ 0.25
ALK-201ENST00000389048 ANAPC7Q9UJX3 599 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 GDAQ9Y2T3 454 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 GALNT17Q6IS24 598 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 EIF2AK4Q9P2K8 1649 aaKnown RBP16.63■□□□□ 0.25
ALK-201ENST00000389048 CFAP69A5D8W1 941 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 MAN1A2O60476 641 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 MXI1P50539 228 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 ERFEQ4G0M1 354 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 ZNF467Q7Z7K2 595 aaPredicted RBP16.63■□□□□ 0.25
ALK-201ENST00000389048 SMAD5Q99717 465 aaKnown RBP16.63■□□□□ 0.25
ALK-201ENST00000389048 PCSK1NQ9UHG2 260 aa16.63■□□□□ 0.25
ALK-201ENST00000389048 WBP4O75554 376 aaKnown RBP16.62■□□□□ 0.25
ALK-201ENST00000389048 GAP43P17677 238 aa16.62■□□□□ 0.25
ALK-201ENST00000389048 KIF23Q02241 960 aaPredicted RBP16.62■□□□□ 0.25
ALK-201ENST00000389048 MYO1EQ12965 1108 aa16.62■□□□□ 0.25
ALK-201ENST00000389048 DCAF15Q66K64 600 aa16.62■□□□□ 0.25
ALK-201ENST00000389048 PPHLN1Q8NEY8 458 aaKnown RBP16.62■□□□□ 0.25
ALK-201ENST00000389048 RNF25Q96BH1 459 aaPredicted RBP16.62■□□□□ 0.25
ALK-201ENST00000389048 ABCC4O15439 1325 aa16.62■□□□□ 0.25
ALK-201ENST00000389048 PLEKHA8P1O95397 391 aa16.62■□□□□ 0.25
ALK-201ENST00000389048 VSTM4Q8IW00 320 aa16.62■□□□□ 0.25
ALK-201ENST00000389048 CPVLQ9H3G5 476 aa16.62■□□□□ 0.25
ALK-201ENST00000389048 HDAC6Q9UBN7 1215 aa16.62■□□□□ 0.25
ALK-201ENST00000389048 E2F8A0AVK6 867 aa16.62■□□□□ 0.25
ALK-201ENST00000389048 OCA2Q04671 838 aa16.62■□□□□ 0.25
ALK-201ENST00000389048 LOC102724159A0A0B4J2E5 919 aa16.62■□□□□ 0.25
ALK-201ENST00000389048 STAT2P52630 851 aa16.62■□□□□ 0.25
ALK-201ENST00000389048 NME3Q13232 169 aa16.62■□□□□ 0.25
ALK-201ENST00000389048 MKRN4PQ13434 485 aaPredicted RBP16.62■□□□□ 0.25
ALK-201ENST00000389048 PWP2Q15269 919 aaKnown RBP16.62■□□□□ 0.25
ALK-201ENST00000389048 C6orf118Q5T5N4 469 aa16.62■□□□□ 0.25
ALK-201ENST00000389048 IFT43Q96FT9 208 aa16.62■□□□□ 0.25
ALK-201ENST00000389048 ATG3Q9NT62 314 aa16.62■□□□□ 0.25
ALK-201ENST00000389048 APOBEC2Q9Y235 224 aaKnown RBP16.62■□□□□ 0.25
ALK-201ENST00000389048 ZBTB22O15209 634 aa16.61■□□□□ 0.25
ALK-201ENST00000389048 IL17REQ8NFR9 667 aa16.61■□□□□ 0.25
ALK-201ENST00000389048 OSBPL1AQ9BXW6 950 aa16.61■□□□□ 0.25
ALK-201ENST00000389048 PARVGQ9HBI0 331 aa16.61■□□□□ 0.25
ALK-201ENST00000389048 TAC1P20366 129 aa16.61■□□□□ 0.25
ALK-201ENST00000389048 KPNA2P52292 529 aaKnown RBP16.61■□□□□ 0.25
ALK-201ENST00000389048 SYDE2Q5VT97 1194 aa16.61■□□□□ 0.25
ALK-201ENST00000389048 ZNF746Q6NUN9 644 aaPredicted RBP16.61■□□□□ 0.25
ALK-201ENST00000389048 KCTD17Q8N5Z5 321 aa16.61■□□□□ 0.25
ALK-201ENST00000389048 LZICQ8WZA0 190 aa16.61■□□□□ 0.25
ALK-201ENST00000389048 ZBTB18Q99592 522 aa16.61■□□□□ 0.25
ALK-201ENST00000389048 ACTR5Q9H9F9 607 aaPredicted RBP16.61■□□□□ 0.25
ALK-201ENST00000389048 XPOTO43592 962 aaKnown RBP16.61■□□□□ 0.25
ALK-201ENST00000389048 VCAM1P19320 739 aa16.61■□□□□ 0.25
ALK-201ENST00000389048 CACNB2Q08289 660 aaPredicted RBP16.61■□□□□ 0.25
ALK-201ENST00000389048 AP1B1Q10567 949 aa16.61■□□□□ 0.25
ALK-201ENST00000389048 TAF1BQ53T94 588 aaPredicted RBP16.61■□□□□ 0.25
ALK-201ENST00000389048 SUN2Q9UH99 717 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms