RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 VHLLQ6RSH7 139 aa2.57□□□□□ -2
SNORA40-201ENST00000388090 DNAJC14Q6Y2X3 702 aaPredicted RBP2.57□□□□□ -2
SNORA40-201ENST00000388090 SRRM1Q8IYB3 904 aaKnown RBP2.57□□□□□ -2
SNORA40-201ENST00000388090 SPATA3Q8NHX4 192 aa2.57□□□□□ -2
SNORA40-201ENST00000388090 C1QTNF7Q9BXJ2 289 aa2.57□□□□□ -2
SNORA40-201ENST00000388090 A0A1W2PRX2 142 aa2.56□□□□□ -2
SNORA40-201ENST00000388090 KCNAB3O43448 404 aa2.56□□□□□ -2
SNORA40-201ENST00000388090 CPP00450 1065 aa2.56□□□□□ -2
SNORA40-201ENST00000388090 COL6A2P12110 1019 aa2.56□□□□□ -2
SNORA40-201ENST00000388090 ITGAEP38570 1179 aa2.56□□□□□ -2
SNORA40-201ENST00000388090 GIPRP48546 466 aa2.56□□□□□ -2
SNORA40-201ENST00000388090 MEOX1P50221 254 aa2.56□□□□□ -2
SNORA40-201ENST00000388090 C1QL3Q5VWW1 255 aa2.56□□□□□ -2
SNORA40-201ENST00000388090 KCTD1Q719H9 257 aa2.56□□□□□ -2
SNORA40-201ENST00000388090 GSPT2Q8IYD1 628 aaKnown RBP2.56□□□□□ -2
SNORA40-201ENST00000388090 TMEM145Q8NBT3 493 aa2.56□□□□□ -2
SNORA40-201ENST00000388090 RABGGTAQ92696 567 aa2.56□□□□□ -2
SNORA40-201ENST00000388090 WNK4Q96J92 1243 aa2.56□□□□□ -2
SNORA40-201ENST00000388090 LRFN3Q9BTN0 628 aa2.56□□□□□ -2
SNORA40-201ENST00000388090 CYP4F11Q9HBI6 524 aa2.56□□□□□ -2
SNORA40-201ENST00000388090 ALG13Q9NP73 1137 aaKnown RBP2.56□□□□□ -2
SNORA40-201ENST00000388090 INSL6Q9Y581 213 aa2.56□□□□□ -2
SNORA40-201ENST00000388090 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.55□□□□□ -2
SNORA40-201ENST00000388090 MSCO60682 206 aa2.55□□□□□ -2
SNORA40-201ENST00000388090 PPFIA4O75335 1185 aa2.55□□□□□ -2
SNORA40-201ENST00000388090 ZEB1P37275 1124 aaPredicted RBP2.55□□□□□ -2
SNORA40-201ENST00000388090 STAT3P40763 770 aa2.55□□□□□ -2
SNORA40-201ENST00000388090 GFRA1P56159 465 aa2.55□□□□□ -2
SNORA40-201ENST00000388090 ELAVL1Q15717 326 aaKnown RBP2.55□□□□□ -2
SNORA40-201ENST00000388090 SLC35F1Q5T1Q4 408 aa2.55□□□□□ -2
SNORA40-201ENST00000388090 TMEM200BQ69YZ2 307 aa2.55□□□□□ -2
SNORA40-201ENST00000388090 RTKN2Q8IZC4 609 aa2.55□□□□□ -2
SNORA40-201ENST00000388090 BOLLQ8N9W6 283 aaKnown RBP2.55□□□□□ -2
SNORA40-201ENST00000388090 NELL1Q92832 810 aa2.55□□□□□ -2
SNORA40-201ENST00000388090 PPP1R14AQ96A00 147 aa2.55□□□□□ -2
SNORA40-201ENST00000388090 C16orf92Q96LL3 132 aa2.55□□□□□ -2
SNORA40-201ENST00000388090 CCDC140Q96MF4 163 aa2.55□□□□□ -2
SNORA40-201ENST00000388090 ARHGEF17Q96PE2 2063 aaPredicted RBP2.55□□□□□ -2
SNORA40-201ENST00000388090 CRBNQ96SW2 442 aa2.55□□□□□ -2
SNORA40-201ENST00000388090 MNTQ99583 582 aa2.55□□□□□ -2
SNORA40-201ENST00000388090 SYBUQ9NX95 663 aa2.55□□□□□ -2
SNORA40-201ENST00000388090 DSEQ9UL01 958 aa2.55□□□□□ -2
SNORA40-201ENST00000388090 NUB1Q9Y5A7 615 aa2.55□□□□□ -2
SNORA40-201ENST00000388090 POLR2AP24928 1970 aaKnown RBP2.54□□□□□ -2
SNORA40-201ENST00000388090 A0A0G2JNJ9 132 aa2.54□□□□□ -2
SNORA40-201ENST00000388090 CENPVL1A0A0U1RR11 272 aa2.54□□□□□ -2
SNORA40-201ENST00000388090 RBMXL2O75526 392 aaKnown RBP2.54□□□□□ -2
SNORA40-201ENST00000388090 ZFPL1O95159 310 aa2.54□□□□□ -2
SNORA40-201ENST00000388090 C1RP00736 705 aa2.54□□□□□ -2
SNORA40-201ENST00000388090 NAT2P11245 290 aa2.54□□□□□ -2
SNORA40-201ENST00000388090 EIF6P56537 245 aaKnown RBP2.54□□□□□ -2
SNORA40-201ENST00000388090 ST5P78524 1137 aa2.54□□□□□ -2
SNORA40-201ENST00000388090 SMAD3P84022 425 aaKnown RBP2.54□□□□□ -2
SNORA40-201ENST00000388090 CD83Q01151 205 aa2.54□□□□□ -2
SNORA40-201ENST00000388090 PLEKHG4Q58EX7 1191 aa2.54□□□□□ -2
SNORA40-201ENST00000388090 KANK2Q63ZY3 851 aa2.54□□□□□ -2
SNORA40-201ENST00000388090 CRELD2Q6UXH1 353 aaPredicted RBP2.54□□□□□ -2
SNORA40-201ENST00000388090 OTOP2Q7RTS6 562 aa2.54□□□□□ -2
SNORA40-201ENST00000388090 ZNF227Q86WZ6 799 aa2.54□□□□□ -2
SNORA40-201ENST00000388090 SIMC1Q8NDZ2 872 aa2.54□□□□□ -2
SNORA40-201ENST00000388090 PGBD4Q96DM1 585 aa2.54□□□□□ -2
SNORA40-201ENST00000388090 ZNF778Q96MU6 729 aa2.54□□□□□ -2
SNORA40-201ENST00000388090 SLC29A3Q9BZD2 475 aa2.54□□□□□ -2
SNORA40-201ENST00000388090 GALNT8Q9NY28 637 aa2.54□□□□□ -2
SNORA40-201ENST00000388090 Q9UFV3 132 aa2.54□□□□□ -2
SNORA40-201ENST00000388090 FAM184BQ9ULE4 1060 aa2.54□□□□□ -2
SNORA40-201ENST00000388090 EPN1Q9Y6I3 576 aaPredicted RBP2.54□□□□□ -2
SNORA40-201ENST00000388090 CYSRT1A8MQ03 144 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 GOLGA6L6A8MZA4 724 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 CAPNS1P04632 268 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 PTGS1P23219 599 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 KCNJ6P48051 423 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 STAT5BP51692 787 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 ADCY7P51828 1080 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 ELLP55199 621 aaPredicted RBP2.53□□□□□ -2
SNORA40-201ENST00000388090 CASP7P55210 303 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 SPIRE1Q08AE8 756 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 ACAP1Q15027 740 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 PPP2R5EQ16537 467 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 TIGD2Q4W5G0 525 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 NAIF1Q69YI7 327 aaPredicted RBP2.53□□□□□ -2
SNORA40-201ENST00000388090 FAM111BQ6SJ93 734 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 CXorf67Q86X51 503 aaPredicted RBP2.53□□□□□ -2
SNORA40-201ENST00000388090 OR6P1Q8NGX9 317 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 SH3RF2Q8TEC5 729 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 GPHA2Q96T91 129 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 SPATA5L1Q9BVQ7 753 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 CD244Q9BZW8 370 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 SERHL2Q9H4I8 314 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 INCENPQ9NQS7 918 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 GPR27Q9NS67 375 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 GINM1Q9NU53 330 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 ARHGAP28Q9P2N2 729 aa2.53□□□□□ -2
SNORA40-201ENST00000388090 CTDP1Q9Y5B0 961 aaPredicted RBP2.53□□□□□ -2
SNORA40-201ENST00000388090 FAM90A27PA6NNH2 459 aa2.52□□□□□ -2.01
SNORA40-201ENST00000388090 LPXNO60711 386 aa2.52□□□□□ -2.01
SNORA40-201ENST00000388090 MPIG6BO95866 241 aa2.52□□□□□ -2.01
SNORA40-201ENST00000388090 GNAT1P11488 350 aa2.52□□□□□ -2.01
SNORA40-201ENST00000388090 ABCG1P45844 678 aa2.52□□□□□ -2.01
SNORA40-201ENST00000388090 SOX9P48436 509 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms