RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 DEPDC1Q5TB30 811 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.56□□□□□ -0.72
VLDLR-203ENST00000382100 CASP10Q92851 521 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 PARVGQ9HBI0 331 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 APPL1Q9UKG1 709 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 RPL26L1Q9UNX3 145 aaKnown RBP10.56□□□□□ -0.72
VLDLR-203ENST00000382100 ABCA10Q8WWZ4 1543 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 RGS20O76081 388 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 TCF3P15923 654 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 NFIAQ12857 509 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 SNX17Q15036 470 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 ARHGEF1Q92888 912 aaKnown RBP10.56□□□□□ -0.72
VLDLR-203ENST00000382100 ATP6V1HQ9UI12 483 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 EFR3BQ9Y2G0 817 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 RAPGEF6Q8TEU7 1601 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 RNF103-CHMP3A0A140T963 221 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 AP3M2P53677 418 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 MAN2A1Q16706 1144 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 TLK2Q86UE8 772 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 WDR11Q9BZH6 1224 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 ZNF229Q9UJW7 825 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 PCDHB8Q9UN66 801 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 CTNND2Q9UQB3 1225 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 DDHD1Q8NEL9 900 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 PPP1R36Q96LQ0 422 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 FRMD8P1Q9BZ68 369 aaPredicted RBP10.55□□□□□ -0.72
VLDLR-203ENST00000382100 CABP2Q9NPB3 220 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 PCDHGB4Q9UN71 923 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 POTEFA5A3E0 1075 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 MYL4P12829 197 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 ULK2Q8IYT8 1036 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 MS4A14Q96JA4 679 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 CEP72Q9P209 647 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 STON1Q9Y6Q2 735 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 PIGBOS1A0A0B4J2F0 54 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 KCNK3O14649 394 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 RPLP2P05387 115 aaKnown RBP10.55□□□□□ -0.72
VLDLR-203ENST00000382100 SLC9C2Q5TAH2 1124 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 SNF8Q96H20 258 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 PITPNM3Q9BZ71 974 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 NRBP1Q9UHY1 535 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 CAPN11Q9UMQ6 739 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 YWHAGP61981 247 aaKnown RBP eCLIP10.55□□□□□ -0.72
VLDLR-203ENST00000382100 DCAF15Q66K64 600 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 SDE2Q6IQ49 451 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 CCDC126Q96EE4 140 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 PICK1Q9NRD5 415 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 FAM187AA6NFU0 413 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 XPAP23025 273 aaPredicted RBP10.55□□□□□ -0.72
VLDLR-203ENST00000382100 RECQLP46063 649 aaPredicted RBP10.55□□□□□ -0.72
VLDLR-203ENST00000382100 HIRAP54198 1017 aaPredicted RBP10.55□□□□□ -0.72
VLDLR-203ENST00000382100 TJAP1Q5JTD0 557 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 ARMC3Q5W041 872 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 CLMNQ96JQ2 1002 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 RBBP8Q99708 897 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 HMG20AQ9NP66 347 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 ACBD5Q5T8D3 534 aaPredicted RBP10.55□□□□□ -0.72
VLDLR-203ENST00000382100 PDE11AQ9HCR9 933 aa10.55□□□□□ -0.72
VLDLR-203ENST00000382100 ZNF215Q9UL58 517 aaPredicted RBP10.55□□□□□ -0.72
VLDLR-203ENST00000382100 FAM32AQ9Y421 112 aaKnown RBP10.55□□□□□ -0.72
VLDLR-203ENST00000382100 ZNF197O14709 1029 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 LCA5LO95447 670 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 U2AF2P26368 475 aaKnown RBP eCLIP10.54□□□□□ -0.72
VLDLR-203ENST00000382100 TRIM16LQ309B1 348 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 HIBCHQ6NVY1 386 aaPredicted RBP10.54□□□□□ -0.72
VLDLR-203ENST00000382100 COG4Q9H9E3 785 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 CAB39Q9Y376 341 aaPredicted RBP10.54□□□□□ -0.72
VLDLR-203ENST00000382100 POLEQ07864 2286 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 SRRM3A6NNA2 597 aaPredicted RBP10.54□□□□□ -0.72
VLDLR-203ENST00000382100 AP1G2O75843 785 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 PLD3Q8IV08 490 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 TTC8Q8TAM2 541 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 DGCR14Q96DF8 476 aaKnown RBP10.54□□□□□ -0.72
VLDLR-203ENST00000382100 NT5C1BQ96P26 610 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 WBP11Q9Y2W2 641 aaKnown RBP10.54□□□□□ -0.72
VLDLR-203ENST00000382100 SLC4A4Q9Y6R1 1079 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 BRD1O95696 1058 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 OCM2P0CE71 109 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 OCMP0CE72 109 aaPredicted RBP10.54□□□□□ -0.72
VLDLR-203ENST00000382100 TBXAS1P24557 533 aaPredicted RBP10.54□□□□□ -0.72
VLDLR-203ENST00000382100 POLE2P56282 527 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 JADE3Q92613 823 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 USP13Q92995 863 aaPredicted RBP10.54□□□□□ -0.72
VLDLR-203ENST00000382100 NACC1Q96RE7 527 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 THUMPD2Q9BTF0 503 aaKnown RBP10.54□□□□□ -0.72
VLDLR-203ENST00000382100 CABP1Q9NZU7 370 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 MYL6BP14649 208 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 EXOC3L4Q17RC7 722 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 RNF26Q9BY78 433 aaPredicted RBP10.54□□□□□ -0.72
VLDLR-203ENST00000382100 TRIM31Q9BZY9 425 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 POLR2DO15514 142 aaKnown RBP10.54□□□□□ -0.72
VLDLR-203ENST00000382100 SGSM2O43147 1006 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 NCF4Q15080 339 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 TRMT10CQ7L0Y3 403 aaKnown RBP10.54□□□□□ -0.72
VLDLR-203ENST00000382100 ATP5J2-PTCD1G3V325 749 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 PTCD1O75127 700 aaKnown RBP10.54□□□□□ -0.72
VLDLR-203ENST00000382100 C1DQ13901 141 aaKnown RBP10.54□□□□□ -0.72
VLDLR-203ENST00000382100 GIMAP8Q8ND71 665 aaPredicted RBP10.54□□□□□ -0.72
VLDLR-203ENST00000382100 POMGNT1Q8WZA1 660 aa10.54□□□□□ -0.72
VLDLR-203ENST00000382100 RWDD2AQ9UIY3 292 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms