RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 INTS9Q9NV88 658 aaKnown RBP16.06■□□□□ 0.16
SNPH-202ENST00000381873 CLDN3O15551 220 aa16.06■□□□□ 0.16
SNPH-202ENST00000381873 ANXA13P27216 316 aa16.06■□□□□ 0.16
SNPH-202ENST00000381873 PTPN21Q16825 1174 aa16.06■□□□□ 0.16
SNPH-202ENST00000381873 KCTD6Q8NC69 237 aa16.06■□□□□ 0.16
SNPH-202ENST00000381873 CEP95Q96GE4 821 aa16.06■□□□□ 0.16
SNPH-202ENST00000381873 PBKQ96KB5 322 aa16.06■□□□□ 0.16
SNPH-202ENST00000381873 ZNF512BQ96KM6 892 aaPredicted RBP16.06■□□□□ 0.16
SNPH-202ENST00000381873 CPVLQ9H3G5 476 aa16.06■□□□□ 0.16
SNPH-202ENST00000381873 RAVER2Q9HCJ3 691 aaKnown RBP16.06■□□□□ 0.16
SNPH-202ENST00000381873 FTCDO95954 541 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 S100BP04271 92 aaPredicted RBP16.05■□□□□ 0.16
SNPH-202ENST00000381873 BASP1P80723 227 aaKnown RBP16.05■□□□□ 0.16
SNPH-202ENST00000381873 IL9RQ01113 521 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 DBN1Q16643 649 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 ZSCAN26Q16670 478 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 JADE1Q6IE81 842 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 DARS2Q6PI48 645 aaKnown RBP16.05■□□□□ 0.16
SNPH-202ENST00000381873 SCARA5Q6ZMJ2 495 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 MYLK4Q86YV6 388 aaPredicted RBP16.05■□□□□ 0.16
SNPH-202ENST00000381873 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.05■□□□□ 0.16
SNPH-202ENST00000381873 ATP6V1E2Q96A05 226 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 ANGPTL3Q9Y5C1 460 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 F5H6K3 240 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 NDUFA10O95299 355 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 GPSM2P81274 684 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 CYP27A1Q02318 531 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 KLRC3Q07444 240 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 SEPT6Q14141 434 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 VSTM4Q8IW00 320 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 DCLK2Q8N568 766 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 OR6B3Q8NGW1 331 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 KIAA1586Q9HCI6 787 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 VCX3AQ9NNX9 186 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 MROH7-TTC4A0A0A0MT08 1334 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 ERICH1Q86X53 443 aa16.05■□□□□ 0.16
SNPH-202ENST00000381873 ENAHQ8N8S7 591 aaPredicted RBP16.05■□□□□ 0.16
SNPH-202ENST00000381873 PRPF38AQ8NAV1 312 aaKnown RBP16.05■□□□□ 0.16
SNPH-202ENST00000381873 NHEJ1Q9H9Q4 299 aaPredicted RBP16.05■□□□□ 0.16
SNPH-202ENST00000381873 EPHB4P54760 987 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 SLFNL1Q499Z3 407 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 TCP11X2Q5H9J9 407 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 RAB44Q7Z6P3 723 aaPredicted RBP16.04■□□□□ 0.16
SNPH-202ENST00000381873 KSR1Q8IVT5 923 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 ACRBPQ8NEB7 543 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 CCHCR1Q8TD31 782 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 ATP6V0A4Q9HBG4 840 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 GJB4Q9NTQ9 266 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 STK36Q9NRP7 1315 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 HIP1RO75146 1068 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 KRT3P12035 628 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 XXYLT1Q8NBI6 393 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 NGRNQ9NPE2 291 aaKnown RBP16.04■□□□□ 0.16
SNPH-202ENST00000381873 KIF1AQ12756 1690 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 IFNAR2P48551 515 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 PRELPP51888 382 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 ARL13BQ3SXY8 428 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 SPTLC3Q9NUV7 552 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 ATP8A1Q9Y2Q0 1164 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 MYOM1P52179 1685 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 POTEMA6NI47 508 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 PADI6Q6TGC4 694 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 APOBEC3FQ8IUX4 373 aaKnown RBP16.04■□□□□ 0.16
SNPH-202ENST00000381873 MIPOL1Q8TD10 442 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 TLK1Q9UKI8 766 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 GDAQ9Y2T3 454 aa16.04■□□□□ 0.16
SNPH-202ENST00000381873 FDX1P10109 184 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 MSH2P43246 934 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 KRT31Q15323 416 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 KCTD16Q68DU8 428 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 SPATS2Q86XZ4 545 aaKnown RBP16.03■□□□□ 0.16
SNPH-202ENST00000381873 MARCH10Q8NA82 808 aaPredicted RBP16.03■□□□□ 0.16
SNPH-202ENST00000381873 CFAP61Q8NHU2 1237 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 PSPC1Q8WXF1 523 aaKnown RBP16.03■□□□□ 0.16
SNPH-202ENST00000381873 KIF9Q9HAQ2 790 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 USH1CQ9Y6N9 552 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 SART1O43290 800 aaKnown RBP16.03■□□□□ 0.16
SNPH-202ENST00000381873 CSPG5O95196 566 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 CXCR5P32302 372 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 IQCB1Q15051 598 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 MMEL1Q495T6 779 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 ELMSAN1Q6PJG2 1045 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 TRIM42Q8IWZ5 723 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 NEK9Q8TD19 979 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 CSF1RP07333 972 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 EPHB1P54762 984 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 PPP1R18Q6NYC8 613 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 RHOT2Q8IXI1 618 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 ZNF579Q8NAF0 562 aaKnown RBP16.03■□□□□ 0.16
SNPH-202ENST00000381873 SCINQ9Y6U3 715 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 PHLPP2Q6ZVD8 1323 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 SUN1O94901 812 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 ZNF18P17022 549 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 DONSONQ9NYP3 566 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 SLC8A2Q9UPR5 921 aa16.03■□□□□ 0.16
SNPH-202ENST00000381873 CAMTA2O94983 1202 aa16.02■□□□□ 0.16
SNPH-202ENST00000381873 PHKA2P46019 1235 aa16.02■□□□□ 0.16
SNPH-202ENST00000381873 THOC5Q13769 683 aaKnown RBP16.02■□□□□ 0.16
SNPH-202ENST00000381873 NFIXQ14938 502 aa16.02■□□□□ 0.16
SNPH-202ENST00000381873 BZW1Q7L1Q6 419 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms