RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 ZBTB39O15060 712 aa16.61■□□□□ 0.25
VCX3B-201ENST00000381029 PARNO95453 639 aaKnown RBP16.61■□□□□ 0.25
VCX3B-201ENST00000381029 PFKMP08237 780 aa16.61■□□□□ 0.25
VCX3B-201ENST00000381029 TECP42680 631 aa16.61■□□□□ 0.25
VCX3B-201ENST00000381029 PSRC1Q6PGN9 363 aaPredicted RBP16.61■□□□□ 0.25
VCX3B-201ENST00000381029 CKAP2LQ8IYA6 745 aa16.61■□□□□ 0.25
VCX3B-201ENST00000381029 ZNF579Q8NAF0 562 aaKnown RBP16.61■□□□□ 0.25
VCX3B-201ENST00000381029 HERVK_113Q902F9 699 aa16.61■□□□□ 0.25
VCX3B-201ENST00000381029 NRBP2Q9NSY0 501 aa16.61■□□□□ 0.25
VCX3B-201ENST00000381029 SZT2Q5T011 3432 aa16.61■□□□□ 0.25
VCX3B-201ENST00000381029 RSPH10B2B2RC85 870 aa16.6■□□□□ 0.25
VCX3B-201ENST00000381029 SOX1O00570 391 aaPredicted RBP16.6■□□□□ 0.25
VCX3B-201ENST00000381029 MARCH6O60337 910 aa16.6■□□□□ 0.25
VCX3B-201ENST00000381029 MED24O75448 989 aa16.6■□□□□ 0.25
VCX3B-201ENST00000381029 CTSHP09668 335 aa16.6■□□□□ 0.25
VCX3B-201ENST00000381029 RSPH10BP0C881 870 aa16.6■□□□□ 0.25
VCX3B-201ENST00000381029 CYP4A11Q02928 519 aa16.6■□□□□ 0.25
VCX3B-201ENST00000381029 CTTNQ14247 550 aaKnown RBP16.6■□□□□ 0.25
VCX3B-201ENST00000381029 PDIA5Q14554 519 aa16.6■□□□□ 0.25
VCX3B-201ENST00000381029 FAM173BQ6P4H8 233 aa16.6■□□□□ 0.25
VCX3B-201ENST00000381029 TRMT1LQ7Z2T5 733 aaKnown RBP16.6■□□□□ 0.25
VCX3B-201ENST00000381029 NEK9Q8TD19 979 aa16.6■□□□□ 0.25
VCX3B-201ENST00000381029 ZSWIM4Q9H7M6 989 aa16.6■□□□□ 0.25
VCX3B-201ENST00000381029 CXXC1Q9P0U4 656 aaPredicted RBP16.6■□□□□ 0.25
VCX3B-201ENST00000381029 CEP131Q9UPN4 1083 aa16.6■□□□□ 0.25
VCX3B-201ENST00000381029 KDM3AQ9Y4C1 1321 aa16.6■□□□□ 0.25
VCX3B-201ENST00000381029 RPLP2P05387 115 aaKnown RBP16.59■□□□□ 0.25
VCX3B-201ENST00000381029 NPEPPSP55786 919 aa16.59■□□□□ 0.25
VCX3B-201ENST00000381029 PKP1Q13835 747 aa16.59■□□□□ 0.25
VCX3B-201ENST00000381029 PTPAQ15257 358 aa16.59■□□□□ 0.25
VCX3B-201ENST00000381029 PLEKHG4Q58EX7 1191 aa16.59■□□□□ 0.25
VCX3B-201ENST00000381029 PLA2G4FQ68DD2 849 aa16.59■□□□□ 0.25
VCX3B-201ENST00000381029 DEFB128Q7Z7B8 93 aa16.59■□□□□ 0.25
VCX3B-201ENST00000381029 CATSPER3Q86XQ3 398 aa16.59■□□□□ 0.25
VCX3B-201ENST00000381029 RPUSD2Q8IZ73 545 aaKnown RBP16.59■□□□□ 0.25
VCX3B-201ENST00000381029 SH2D3AQ9BRG2 576 aa16.59■□□□□ 0.25
VCX3B-201ENST00000381029 MMTAG2Q9BU76 263 aaKnown RBP16.59■□□□□ 0.25
VCX3B-201ENST00000381029 POLR3CQ9BUI4 534 aaPredicted RBP16.59■□□□□ 0.25
VCX3B-201ENST00000381029 FTOQ9C0B1 505 aaKnown RBP eCLIP16.59■□□□□ 0.25
VCX3B-201ENST00000381029 CYP26B1Q9NR63 512 aa16.59■□□□□ 0.25
VCX3B-201ENST00000381029 MAGEB2O15479 319 aa16.58■□□□□ 0.24
VCX3B-201ENST00000381029 DKC1O60832 514 aaKnown RBP eCLIP16.58■□□□□ 0.24
VCX3B-201ENST00000381029 GPR32O75388 356 aa16.58■□□□□ 0.24
VCX3B-201ENST00000381029 MAFO75444 373 aaPredicted RBP16.58■□□□□ 0.24
VCX3B-201ENST00000381029 FGBP02675 491 aa16.58■□□□□ 0.24
VCX3B-201ENST00000381029 RPA1P27694 616 aa16.58■□□□□ 0.24
VCX3B-201ENST00000381029 YWHABP31946 246 aaKnown RBP16.58■□□□□ 0.24
VCX3B-201ENST00000381029 FXR1P51114 621 aaKnown RBP eCLIP16.58■□□□□ 0.24
VCX3B-201ENST00000381029 CLCN3P51790 818 aa16.58■□□□□ 0.24
VCX3B-201ENST00000381029 MRPS6P82932 125 aaKnown RBP16.58■□□□□ 0.24
VCX3B-201ENST00000381029 DRP2Q13474 957 aa16.58■□□□□ 0.24
VCX3B-201ENST00000381029 LPIN1Q14693 890 aa16.58■□□□□ 0.24
VCX3B-201ENST00000381029 ECM1Q16610 540 aa16.58■□□□□ 0.24
VCX3B-201ENST00000381029 ARL6IP4Q66PJ3 421 aaKnown RBP16.58■□□□□ 0.24
VCX3B-201ENST00000381029 NME8Q8N427 588 aa16.58■□□□□ 0.24
VCX3B-201ENST00000381029 FAM49AQ9H0Q0 323 aaPredicted RBP16.58■□□□□ 0.24
VCX3B-201ENST00000381029 DHX33Q9H6R0 707 aaKnown RBP16.58■□□□□ 0.24
VCX3B-201ENST00000381029 CDHR5Q9HBB8 845 aa16.58■□□□□ 0.24
VCX3B-201ENST00000381029 SEPT9Q9UHD8 586 aaPredicted RBP16.58■□□□□ 0.24
VCX3B-201ENST00000381029 MORC2Q9Y6X9 1032 aaPredicted RBP16.58■□□□□ 0.24
VCX3B-201ENST00000381029 DDX11L8A8MPP1 907 aa16.57■□□□□ 0.24
VCX3B-201ENST00000381029 MTERF2Q49AM1 385 aa16.57■□□□□ 0.24
VCX3B-201ENST00000381029 FBXO47Q5MNV8 452 aa16.57■□□□□ 0.24
VCX3B-201ENST00000381029 FAM109BQ6ICB4 259 aaPredicted RBP16.57■□□□□ 0.24
VCX3B-201ENST00000381029 TPH2Q8IWU9 490 aa16.57■□□□□ 0.24
VCX3B-201ENST00000381029 LRRC71Q8N4P6 559 aa16.57■□□□□ 0.24
VCX3B-201ENST00000381029 AGO3Q9H9G7 860 aaKnown RBP16.57■□□□□ 0.24
VCX3B-201ENST00000381029 TUFT1Q9NNX1 390 aa16.57■□□□□ 0.24
VCX3B-201ENST00000381029 PPME1Q9Y570 386 aa16.57■□□□□ 0.24
VCX3B-201ENST00000381029 CLIC4Q9Y696 253 aa16.57■□□□□ 0.24
VCX3B-201ENST00000381029 CDY2AQ9Y6F7 541 aa16.57■□□□□ 0.24
VCX3B-201ENST00000381029 SQORQ9Y6N5 450 aa16.57■□□□□ 0.24
VCX3B-201ENST00000381029 PP2D1A8MPX8 630 aa16.56■□□□□ 0.24
VCX3B-201ENST00000381029 XRCC6P12956 609 aaKnown RBP eCLIP16.56■□□□□ 0.24
VCX3B-201ENST00000381029 MUTP22033 750 aa16.56■□□□□ 0.24
VCX3B-201ENST00000381029 RARRES1P49788 294 aa16.56■□□□□ 0.24
VCX3B-201ENST00000381029 GRIN1Q05586 938 aa16.56■□□□□ 0.24
VCX3B-201ENST00000381029 TMEM62Q0P6H9 643 aa16.56■□□□□ 0.24
VCX3B-201ENST00000381029 SF3A1Q15459 793 aaKnown RBP16.56■□□□□ 0.24
VCX3B-201ENST00000381029 EFCAB12Q6NXP0 572 aa16.56■□□□□ 0.24
VCX3B-201ENST00000381029 CNKSR3Q6P9H4 555 aa16.56■□□□□ 0.24
VCX3B-201ENST00000381029 OTOP2Q7RTS6 562 aa16.56■□□□□ 0.24
VCX3B-201ENST00000381029 RSPH3Q86UC2 560 aa16.56■□□□□ 0.24
VCX3B-201ENST00000381029 DBF4BQ8NFT6 615 aa16.56■□□□□ 0.24
VCX3B-201ENST00000381029 TMEM40Q8WWA1 233 aa16.56■□□□□ 0.24
VCX3B-201ENST00000381029 RNPC3Q96LT9 517 aaKnown RBP16.56■□□□□ 0.24
VCX3B-201ENST00000381029 CELF4Q9BZC1 486 aaKnown RBP16.56■□□□□ 0.24
VCX3B-201ENST00000381029 ADAMTS10Q9H324 1103 aa16.56■□□□□ 0.24
VCX3B-201ENST00000381029 ZSCAN16Q9H4T2 348 aaPredicted RBP16.56■□□□□ 0.24
VCX3B-201ENST00000381029 XPNPEP1Q9NQW7 623 aa16.56■□□□□ 0.24
VCX3B-201ENST00000381029 ANKEF1Q9NU02 776 aa16.56■□□□□ 0.24
VCX3B-201ENST00000381029 LRWD1Q9UFC0 647 aa16.56■□□□□ 0.24
VCX3B-201ENST00000381029 ZDHHC9Q9Y397 364 aa16.56■□□□□ 0.24
VCX3B-201ENST00000381029 TRPV2Q9Y5S1 764 aa16.56■□□□□ 0.24
VCX3B-201ENST00000381029 EVPLQ92817 2033 aa16.56■□□□□ 0.24
VCX3B-201ENST00000381029 CHD9Q3L8U1 2897 aa16.56■□□□□ 0.24
VCX3B-201ENST00000381029 A0A087WWV3 80 aa16.55■□□□□ 0.24
VCX3B-201ENST00000381029 VTNP04004 478 aa16.55■□□□□ 0.24
VCX3B-201ENST00000381029 ZSCAN22P10073 491 aaPredicted RBP16.55■□□□□ 0.24
VCX3B-201ENST00000381029 PDIA4P13667 645 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms