RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 GPC2Q8N158 579 aa15.67■□□□□ 0.1
CLCN4-201ENST00000380829 KLRG1Q96E93 195 aa15.67■□□□□ 0.1
CLCN4-201ENST00000380829 RIT2Q99578 217 aa15.67■□□□□ 0.1
CLCN4-201ENST00000380829 FAM13AO94988 1023 aa15.67■□□□□ 0.1
CLCN4-201ENST00000380829 TFRCP02786 760 aaKnown RBP15.67■□□□□ 0.1
CLCN4-201ENST00000380829 GHRHRQ02643 423 aa15.67■□□□□ 0.1
CLCN4-201ENST00000380829 MTMR1Q13613 665 aa15.67■□□□□ 0.1
CLCN4-201ENST00000380829 PGM5Q15124 567 aa15.67■□□□□ 0.1
CLCN4-201ENST00000380829 FIGNQ5HY92 759 aa15.67■□□□□ 0.1
CLCN4-201ENST00000380829 RNF207Q6ZRF8 634 aa15.67■□□□□ 0.1
CLCN4-201ENST00000380829 MIER3Q7Z3K6 550 aa15.67■□□□□ 0.1
CLCN4-201ENST00000380829 MYCT1Q8N699 235 aa15.67■□□□□ 0.1
CLCN4-201ENST00000380829 CCDC102AQ96A19 550 aa15.67■□□□□ 0.1
CLCN4-201ENST00000380829 ZNHIT6Q9NWK9 470 aaKnown RBP15.67■□□□□ 0.1
CLCN4-201ENST00000380829 BCCIPQ9P287 314 aaKnown RBP eCLIP15.67■□□□□ 0.1
CLCN4-201ENST00000380829 TFR2Q9UP52 801 aa15.67■□□□□ 0.1
CLCN4-201ENST00000380829 SSC5DA1L4H1 1573 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 A0A1W2PQJ5 194 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 DHX15O43143 795 aaKnown RBP15.66■□□□□ 0.1
CLCN4-201ENST00000380829 KIF5CO60282 957 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 RPS6KA5O75582 802 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 BCRP11274 1271 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 LMNB1P20700 586 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 ARHGAP25P42331 645 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 EDRF1Q3B7T1 1238 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 NACC1Q96RE7 527 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 RMDN3Q96TC7 470 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 AGO4Q9HCK5 861 aaKnown RBP15.66■□□□□ 0.1
CLCN4-201ENST00000380829 RNF146Q9NTX7 359 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 UBIAD1Q9Y5Z9 338 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 CETN3O15182 167 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 NMT1P30419 496 aaKnown RBP15.66■□□□□ 0.1
CLCN4-201ENST00000380829 CHMP4BP1P59074 171 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 KCNMA1Q12791 1236 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 BRD3Q15059 726 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 ZNF569Q5MCW4 686 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 PPP4R3CPQ6ZMV5 832 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 KCTD17Q8N5Z5 321 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 IKZF4Q9H2S9 585 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 NHEJ1Q9H9Q4 299 aaPredicted RBP15.66■□□□□ 0.1
CLCN4-201ENST00000380829 ABCB6Q9NP58 842 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 TRIM10Q9UDY6 481 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 SAMM50Q9Y512 469 aa15.66■□□□□ 0.1
CLCN4-201ENST00000380829 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.66■□□□□ 0.1
CLCN4-201ENST00000380829 GNA14O95837 355 aa15.65■□□□□ 0.1
CLCN4-201ENST00000380829 PLEKP08567 350 aaPredicted RBP15.65■□□□□ 0.1
CLCN4-201ENST00000380829 BAATQ14032 418 aaPredicted RBP15.65■□□□□ 0.1
CLCN4-201ENST00000380829 SNRNP48Q6IEG0 339 aaKnown RBP15.65■□□□□ 0.1
CLCN4-201ENST00000380829 HDXQ7Z353 690 aa15.65■□□□□ 0.1
CLCN4-201ENST00000380829 TRIM59Q8IWR1 403 aa15.65■□□□□ 0.1
CLCN4-201ENST00000380829 ZC3H3Q8IXZ2 948 aaKnown RBP15.65■□□□□ 0.1
CLCN4-201ENST00000380829 MICALL1Q8N3F8 863 aa15.65■□□□□ 0.1
CLCN4-201ENST00000380829 CRACR2AQ9BSW2 395 aa15.65■□□□□ 0.1
CLCN4-201ENST00000380829 JADE2Q9NQC1 790 aa15.65■□□□□ 0.1
CLCN4-201ENST00000380829 TRAF3IP3Q9Y228 551 aa15.65■□□□□ 0.1
CLCN4-201ENST00000380829 ASTN1O14525 1302 aa15.65■□□□□ 0.1
CLCN4-201ENST00000380829 FRMPD4Q14CM0 1322 aa15.65■□□□□ 0.1
CLCN4-201ENST00000380829 DDNO94850 711 aaPredicted RBP15.65■□□□□ 0.1
CLCN4-201ENST00000380829 ZC2HC1CQ53FD0 456 aaPredicted RBP15.65■□□□□ 0.1
CLCN4-201ENST00000380829 ARHGEF16Q5VV41 709 aa15.65■□□□□ 0.1
CLCN4-201ENST00000380829 TRMT1LQ7Z2T5 733 aaKnown RBP15.65■□□□□ 0.1
CLCN4-201ENST00000380829 KSR1Q8IVT5 923 aa15.65■□□□□ 0.1
CLCN4-201ENST00000380829 PDCD2LQ9BRP1 358 aa15.65■□□□□ 0.1
CLCN4-201ENST00000380829 CXorf56Q9H5V9 222 aa15.65■□□□□ 0.1
CLCN4-201ENST00000380829 PARVGQ9HBI0 331 aa15.65■□□□□ 0.1
CLCN4-201ENST00000380829 PXMP2Q9NR77 195 aa15.65■□□□□ 0.1
CLCN4-201ENST00000380829 OLFML3Q9NRN5 406 aa15.65■□□□□ 0.1
CLCN4-201ENST00000380829 PARP14Q460N5 1801 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 TESPA1A2RU30 521 aaPredicted RBP15.64■□□□□ 0.09
CLCN4-201ENST00000380829 LRRC53A6NM62 1247 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 CLIC2O15247 247 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 GAP43P17677 238 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 MARSP56192 900 aaKnown RBP15.64■□□□□ 0.09
CLCN4-201ENST00000380829 HERVK_113P62684 666 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 APBA1Q02410 837 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 MMS22LQ6ZRQ5 1243 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 RRAGAQ7L523 313 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 NIPA1Q7RTP0 329 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 REPS2Q8NFH8 660 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 FAM204AQ9H8W3 233 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 MAP3K20Q9NYL2 800 aaKnown RBP15.64■□□□□ 0.09
CLCN4-201ENST00000380829 ARHGEF35A5YM69 484 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 ATP9AO75110 1047 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 MUTP22033 750 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 BMT2Q1RMZ1 405 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 MAEAQ7L5Y9 396 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 TADA2BQ86TJ2 420 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 SUGP1Q8IWZ8 645 aaKnown RBP15.64■□□□□ 0.09
CLCN4-201ENST00000380829 SLC35F6Q8N357 371 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 KAT2BQ92831 832 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 SH2D3AQ9BRG2 576 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 TYW1Q9NV66 732 aaKnown RBP15.64■□□□□ 0.09
CLCN4-201ENST00000380829 GUCA1BQ9UMX6 200 aa15.64■□□□□ 0.09
CLCN4-201ENST00000380829 COL11A1P12107 1806 aaPredicted RBP15.63■□□□□ 0.09
CLCN4-201ENST00000380829 PDXKO00764 312 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 CALUO43852 315 aaPredicted RBP15.63■□□□□ 0.09
CLCN4-201ENST00000380829 NR3C1P04150 777 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 RHOXF2BP0C7M4 288 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 DSG3P32926 999 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 TMEM132BQ14DG7 1078 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms