RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 VPS33BQ9H267 617 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 ZBBXA8MT70 800 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 EFCAB8A8MWE9 144 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 GPC3P51654 580 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 EIF3BP55884 814 aaKnown RBP7.71□□□□□ -1.18
CCDC171-201ENST00000380701 NR1H3Q13133 447 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 MXD4Q14582 209 aaPredicted RBP7.71□□□□□ -1.18
CCDC171-201ENST00000380701 IER5Q5VY09 327 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 TRMT44Q8IYL2 757 aaKnown RBP7.71□□□□□ -1.18
CCDC171-201ENST00000380701 PDIK1LQ8N165 341 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 EDC3Q96F86 508 aaKnown RBP7.71□□□□□ -1.18
CCDC171-201ENST00000380701 KLC2Q9H0B6 622 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 FAM49AQ9H0Q0 323 aaPredicted RBP7.71□□□□□ -1.18
CCDC171-201ENST00000380701 TUFT1Q9NNX1 390 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 ETF1P62495 437 aaKnown RBP7.71□□□□□ -1.18
CCDC171-201ENST00000380701 DIXDC1Q155Q3 683 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 KCTD6Q8NC69 237 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 ARHGEF2Q92974 986 aaKnown RBP7.71□□□□□ -1.18
CCDC171-201ENST00000380701 NLRP4Q96MN2 994 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 ZBTB18Q99592 522 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 EPS15L1Q9UBC2 864 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 NXF1Q9UBU9 619 aaKnown RBP7.71□□□□□ -1.18
CCDC171-201ENST00000380701 NDUFB9Q9Y6M9 179 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 PSMD3O43242 534 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 ZBED1O96006 694 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 GH1P01241 217 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 PPP2R5CQ13362 524 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 ZNF568Q3ZCX4 644 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 TAF1BQ53T94 588 aaPredicted RBP7.7□□□□□ -1.18
CCDC171-201ENST00000380701 ELOA2Q8IYF1 753 aaPredicted RBP7.7□□□□□ -1.18
CCDC171-201ENST00000380701 TDRD7Q8NHU6 1098 aaKnown RBP7.7□□□□□ -1.18
CCDC171-201ENST00000380701 LRRC8CQ8TDW0 803 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 SMARCAD1Q9H4L7 1026 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 GCNT4Q9P109 453 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 PCDHA10Q9Y5I2 948 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 SGK1O00141 431 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 TJP3O95049 919 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 PMLP29590 882 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 ARPP19P56211 112 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 FAM83BQ5T0W9 1011 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 FAM151AQ8WW52 585 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 TSSK1BQ9BXA7 367 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 DYRK4Q9NR20 520 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 LMBRD1Q9NUN5 540 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 AGLP35573 1532 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 STAG3L1P0CL83 205 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 SLC16A2P36021 539 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 PADI6Q6TGC4 694 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 STAMQ92783 540 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 MAGOHBQ96A72 148 aaKnown RBP7.7□□□□□ -1.18
CCDC171-201ENST00000380701 DRC3Q9H069 523 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 PCDHA5Q9Y5H7 936 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 C1orf167Q5SNV9 1468 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 FLT1P17948 1338 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 KPNA6O60684 536 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 SERPINB6P35237 376 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 GABPB1Q06547 395 aaPredicted RBP7.7□□□□□ -1.18
CCDC171-201ENST00000380701 SPP2Q13103 211 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 CCDC38Q502W7 563 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 SBK1Q52WX2 424 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 SGO2Q562F6 1265 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 DARS2Q6PI48 645 aaKnown RBP7.7□□□□□ -1.18
CCDC171-201ENST00000380701 MICALL1Q8N3F8 863 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 LINC00301Q8NCQ3 95 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 GDAP1Q8TB36 358 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 GIPC2Q8TF65 315 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 OSBP2Q969R2 916 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 LRGUKQ96M69 825 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 TMEM47Q9BQJ4 181 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 PIH1D3Q9NQM4 214 aaKnown RBP7.7□□□□□ -1.18
CCDC171-201ENST00000380701 ZSWIM5Q9P217 1185 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 PPP2R2CQ9Y2T4 447 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 ORC6Q9Y5N6 252 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 KRT7P08729 469 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 GSPT1P15170 499 aaKnown RBP7.7□□□□□ -1.18
CCDC171-201ENST00000380701 MSH2P43246 934 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 GCLCP48506 637 aaPredicted RBP7.7□□□□□ -1.18
CCDC171-201ENST00000380701 RWDD2BP57060 319 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 CUL4AQ13619 759 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 ZNF699Q32M78 642 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 XKR3Q5GH77 459 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 SKAP1Q86WV1 359 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 ANKRD13AQ8IZ07 590 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 TEX12Q9BXU0 123 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 TRIM54Q9BYV2 358 aa7.7□□□□□ -1.18
CCDC171-201ENST00000380701 CNOT10Q9H9A5 744 aaKnown RBP7.7□□□□□ -1.18
CCDC171-201ENST00000380701 MRPL40Q9NQ50 206 aaKnown RBP7.7□□□□□ -1.18
CCDC171-201ENST00000380701 FCGRTP55899 365 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 NOP14P78316 857 aaKnown RBP7.69□□□□□ -1.18
CCDC171-201ENST00000380701 MESDQ14696 234 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 Q3C1V9 767 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 ZNF526Q8TF50 670 aaPredicted RBP7.69□□□□□ -1.18
CCDC171-201ENST00000380701 CENPKQ9BS16 269 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 MMTAG2Q9BU76 263 aaKnown RBP7.69□□□□□ -1.18
CCDC171-201ENST00000380701 TDRD3Q9H7E2 651 aaKnown RBP7.69□□□□□ -1.18
CCDC171-201ENST00000380701 DDX56Q9NY93 547 aaKnown RBP7.69□□□□□ -1.18
CCDC171-201ENST00000380701 CD163L1Q9NR16 1453 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 LMTK2Q8IWU2 1503 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 IQANK1A0A1B0GTG1 560 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 PODXLO00592 558 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms