RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 UNC80Q8N2C7 3258 aa13.33□□□□□ -0.28
PCNA-201ENST00000379143 DDX11L8A8MPP1 907 aa13.33□□□□□ -0.28
PCNA-201ENST00000379143 PITPNM1O00562 1244 aa13.33□□□□□ -0.28
PCNA-201ENST00000379143 SPTLC2O15270 562 aa13.33□□□□□ -0.28
PCNA-201ENST00000379143 TREHO43280 583 aa13.33□□□□□ -0.28
PCNA-201ENST00000379143 CAND2O75155 1236 aa13.33□□□□□ -0.28
PCNA-201ENST00000379143 SPATA31C1P0DKV0 1188 aa13.33□□□□□ -0.28
PCNA-201ENST00000379143 RAG1P15918 1043 aa13.33□□□□□ -0.28
PCNA-201ENST00000379143 CCT6AP40227 531 aaKnown RBP13.33□□□□□ -0.28
PCNA-201ENST00000379143 IGBP1P78318 339 aa13.33□□□□□ -0.28
PCNA-201ENST00000379143 DNM1Q05193 864 aaKnown RBP13.33□□□□□ -0.28
PCNA-201ENST00000379143 FOXD4L6Q3SYB3 417 aaPredicted RBP13.33□□□□□ -0.28
PCNA-201ENST00000379143 MARCH8Q5T0T0 291 aa13.33□□□□□ -0.28
PCNA-201ENST00000379143 FOXD4L3Q6VB84 417 aaPredicted RBP13.33□□□□□ -0.28
PCNA-201ENST00000379143 ANO5Q75V66 913 aa13.33□□□□□ -0.28
PCNA-201ENST00000379143 TRMT1LQ7Z2T5 733 aaKnown RBP13.33□□□□□ -0.28
PCNA-201ENST00000379143 RSPH3Q86UC2 560 aa13.33□□□□□ -0.28
PCNA-201ENST00000379143 KRI1Q8N9T8 703 aaKnown RBP13.33□□□□□ -0.28
PCNA-201ENST00000379143 RETREG2Q8NC44 543 aa13.33□□□□□ -0.28
PCNA-201ENST00000379143 IPO9Q96P70 1041 aaKnown RBP13.33□□□□□ -0.28
PCNA-201ENST00000379143 NACC1Q96RE7 527 aa13.33□□□□□ -0.28
PCNA-201ENST00000379143 JPH2Q9BR39 696 aaPredicted RBP13.33□□□□□ -0.28
PCNA-201ENST00000379143 NT5C3AQ9H0P0 336 aa13.33□□□□□ -0.28
PCNA-201ENST00000379143 HIPK3Q9H422 1215 aa13.33□□□□□ -0.28
PCNA-201ENST00000379143 ANKEF1Q9NU02 776 aa13.33□□□□□ -0.28
PCNA-201ENST00000379143 WRAP73Q9P2S5 460 aaPredicted RBP13.33□□□□□ -0.28
PCNA-201ENST00000379143 PCDHA2Q9Y5H9 948 aa13.33□□□□□ -0.28
PCNA-201ENST00000379143 ZBTB42B2RXF5 422 aa13.32□□□□□ -0.28
PCNA-201ENST00000379143 MED24O75448 989 aa13.32□□□□□ -0.28
PCNA-201ENST00000379143 STBD1O95210 358 aa13.32□□□□□ -0.28
PCNA-201ENST00000379143 TIMP1P01033 207 aa13.32□□□□□ -0.28
PCNA-201ENST00000379143 CYP2C9P11712 490 aa13.32□□□□□ -0.28
PCNA-201ENST00000379143 KLRC1P26715 233 aa13.32□□□□□ -0.28
PCNA-201ENST00000379143 TMOD1P28289 359 aa13.32□□□□□ -0.28
PCNA-201ENST00000379143 MARCKSP29966 332 aaPredicted RBP13.32□□□□□ -0.28
PCNA-201ENST00000379143 TXLNAP40222 546 aa13.32□□□□□ -0.28
PCNA-201ENST00000379143 UBA7P41226 1012 aa13.32□□□□□ -0.28
PCNA-201ENST00000379143 ZNF200P98182 395 aaPredicted RBP13.32□□□□□ -0.28
PCNA-201ENST00000379143 RBL2Q08999 1139 aa13.32□□□□□ -0.28
PCNA-201ENST00000379143 TBC1D8BQ0IIM8 1120 aa13.32□□□□□ -0.28
PCNA-201ENST00000379143 HIC1Q14526 733 aa13.32□□□□□ -0.28
PCNA-201ENST00000379143 TARBP2Q15633 366 aaKnown RBP13.32□□□□□ -0.28
PCNA-201ENST00000379143 MTHFD1LQ6UB35 978 aa13.32□□□□□ -0.28
PCNA-201ENST00000379143 RPAINQ86UA6 219 aa13.32□□□□□ -0.28
PCNA-201ENST00000379143 CEP170P1Q96L14 293 aa13.32□□□□□ -0.28
PCNA-201ENST00000379143 CCDC43Q96MW1 224 aaKnown RBP13.32□□□□□ -0.28
PCNA-201ENST00000379143 CTAGE1Q96RT6 745 aa13.32□□□□□ -0.28
PCNA-201ENST00000379143 SCAND2PQ9GZW5 306 aaPredicted RBP13.32□□□□□ -0.28
PCNA-201ENST00000379143 CYP26B1Q9NR63 512 aa13.32□□□□□ -0.28
PCNA-201ENST00000379143 CHMP5Q9NZZ3 219 aa13.32□□□□□ -0.28
PCNA-201ENST00000379143 FBXO2Q9UK22 296 aaPredicted RBP13.32□□□□□ -0.28
PCNA-201ENST00000379143 SMIM35A0A1B0GVV1 85 aa13.31□□□□□ -0.28
PCNA-201ENST00000379143 TRIM43BA6NCK2 446 aa13.31□□□□□ -0.28
PCNA-201ENST00000379143 SOX1O00570 391 aaPredicted RBP13.31□□□□□ -0.28
PCNA-201ENST00000379143 GAS2O43903 313 aaKnown RBP13.31□□□□□ -0.28
PCNA-201ENST00000379143 PARNO95453 639 aaKnown RBP13.31□□□□□ -0.28
PCNA-201ENST00000379143 C22orf31O95567 290 aa13.31□□□□□ -0.28
PCNA-201ENST00000379143 NCLP19338 710 aaKnown RBP13.31□□□□□ -0.28
PCNA-201ENST00000379143 RFC5P40937 340 aa13.31□□□□□ -0.28
PCNA-201ENST00000379143 MTERF2Q49AM1 385 aa13.31□□□□□ -0.28
PCNA-201ENST00000379143 HYIQ5T013 277 aa13.31□□□□□ -0.28
PCNA-201ENST00000379143 SH3RF1Q7Z6J0 888 aa13.31□□□□□ -0.28
PCNA-201ENST00000379143 ZNF710Q8N1W2 664 aa13.31□□□□□ -0.28
PCNA-201ENST00000379143 NME8Q8N427 588 aa13.31□□□□□ -0.28
PCNA-201ENST00000379143 ZNF579Q8NAF0 562 aaKnown RBP13.31□□□□□ -0.28
PCNA-201ENST00000379143 TRAPPC12Q8WVT3 735 aa13.31□□□□□ -0.28
PCNA-201ENST00000379143 SLC7A3Q8WY07 619 aa13.31□□□□□ -0.28
PCNA-201ENST00000379143 TRIM43Q96BQ3 446 aaPredicted RBP13.31□□□□□ -0.28
PCNA-201ENST00000379143 CALML4Q96GE6 196 aa13.31□□□□□ -0.28
PCNA-201ENST00000379143 CDK5RAP3Q96JB5 506 aa13.31□□□□□ -0.28
PCNA-201ENST00000379143 NOC4LQ9BVI4 516 aaKnown RBP13.31□□□□□ -0.28
PCNA-201ENST00000379143 CSRNP2Q9H175 543 aa13.31□□□□□ -0.28
PCNA-201ENST00000379143 DBR1Q9UK59 544 aaKnown RBP13.31□□□□□ -0.28
PCNA-201ENST00000379143 RCOR1Q9UKL0 485 aa13.31□□□□□ -0.28
PCNA-201ENST00000379143 A0A1W2PPC1 479 aa13.3□□□□□ -0.28
PCNA-201ENST00000379143 PP2D1A8MPX8 630 aa13.3□□□□□ -0.28
PCNA-201ENST00000379143 CUTAO60888 179 aa13.3□□□□□ -0.28
PCNA-201ENST00000379143 CDC25AP30304 524 aa13.3□□□□□ -0.28
PCNA-201ENST00000379143 ME1P48163 572 aa13.3□□□□□ -0.28
PCNA-201ENST00000379143 XKR9Q5GH70 373 aa13.3□□□□□ -0.28
PCNA-201ENST00000379143 PLA2G4FQ68DD2 849 aa13.3□□□□□ -0.28
PCNA-201ENST00000379143 MFSD5Q6N075 450 aa13.3□□□□□ -0.28
PCNA-201ENST00000379143 POTEGQ6S5H5 508 aa13.3□□□□□ -0.28
PCNA-201ENST00000379143 CABP7Q86V35 215 aa13.3□□□□□ -0.28
PCNA-201ENST00000379143 TMEM199Q8N511 208 aa13.3□□□□□ -0.28
PCNA-201ENST00000379143 DHX38Q92620 1227 aaKnown RBP13.3□□□□□ -0.28
PCNA-201ENST00000379143 SPATA32Q96LK8 384 aa13.3□□□□□ -0.28
PCNA-201ENST00000379143 LBHD1Q9BQE6 289 aaPredicted RBP13.3□□□□□ -0.28
PCNA-201ENST00000379143 MMTAG2Q9BU76 263 aaKnown RBP13.3□□□□□ -0.28
PCNA-201ENST00000379143 CCSER1Q9C0I3 900 aa13.3□□□□□ -0.28
PCNA-201ENST00000379143 DDX19AQ9NUU7 478 aaKnown RBP13.3□□□□□ -0.28
PCNA-201ENST00000379143 ZMYND8Q9ULU4 1186 aaPredicted RBP13.3□□□□□ -0.28
PCNA-201ENST00000379143 KIAA1024Q9UPX6 916 aa13.3□□□□□ -0.28
PCNA-201ENST00000379143 DNM3Q9UQ16 869 aa13.3□□□□□ -0.28
PCNA-201ENST00000379143 LOXHD1Q8IVV2 1947 aa13.3□□□□□ -0.28
PCNA-201ENST00000379143 MAFO75444 373 aaPredicted RBP13.29□□□□□ -0.28
PCNA-201ENST00000379143 DGAT1O75907 488 aa13.29□□□□□ -0.28
PCNA-201ENST00000379143 CKBP12277 381 aa13.29□□□□□ -0.28
PCNA-201ENST00000379143 SELPP16109 830 aa13.29□□□□□ -0.28
PCNA-201ENST00000379143 SYN1P17600 705 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms