RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 GCKP35557 465 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 RCAN1P53805 252 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 UAP1Q16222 522 aaPredicted RBP7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 SGSM1Q2NKQ1 1148 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 ASTE1Q2TB18 679 aaPredicted RBP7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 TM4SF20Q53R12 229 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 AKAP4Q5JQC9 854 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 FAM26DQ5JW98 314 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 CAPRIN2Q6IMN6 1127 aaKnown RBP7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 PI16Q6UXB8 463 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 USP49Q70CQ1 688 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 ILDR2Q71H61 639 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 IFT20Q8IY31 132 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 TEX9Q8N6V9 391 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 HVCN1Q96D96 273 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 IQCDQ96DY2 449 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 IFT43Q96FT9 208 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 CAPZA3Q96KX2 299 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 NUP88Q99567 741 aaPredicted RBP7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 MTRQ99707 1265 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 CSRNP2Q9H175 543 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 NHEJ1Q9H9Q4 299 aaPredicted RBP7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 GTF2A1LQ9UNN4 478 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 TFR2Q9UP52 801 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 CAPN6Q9Y6Q1 641 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 SLC10A3P09131 477 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 FAM200BP0CF97 657 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 RXRBP28702 533 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 ATN1P54259 1190 aaPredicted RBP7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 PIN1Q13526 163 aaPredicted RBP7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 SKA1Q96BD8 255 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 CCDC43Q96MW1 224 aaKnown RBP7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 METTL22Q9BUU2 404 aaPredicted RBP7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 TXLNGYQ9BZA5 131 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 THAP9Q9H5L6 903 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 LY9Q9HBG7 655 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 HYOU1Q9Y4L1 999 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 IPPQ9Y573 584 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 DUSP10Q9Y6W6 482 aa7.3□□□□□ -1.24
CDKAL1-202ENST00000378610 CCDC88AQ3V6T2 1871 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 CCT8L1PA6NM43 557 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 E7EVH7 732 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 H7C1D1 291 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 PES1O00541 588 aaKnown RBP7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 PPP1R12BO60237 982 aaPredicted RBP7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 SKAP2O75563 359 aaPredicted RBP7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 IFNAR1P17181 557 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 EIF2S2P20042 333 aaKnown RBP7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 COL9A1P20849 921 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 CYLC1P35663 651 aaPredicted RBP7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 HALP42357 657 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 LIFRP42702 1097 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 PIP4K2AP48426 406 aaPredicted RBP7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 CARSP49589 748 aaKnown RBP7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 ROR2Q01974 943 aaKnown RBP7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 ZNF844Q08AG5 666 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 IMMTQ16891 758 aaKnown RBP7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 ERMARDQ5T6L9 678 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 ZNF658Q5TYW1 1059 aaPredicted RBP7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 CYB5R4Q7L1T6 521 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 CEP57Q86XR8 500 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 CFAP61Q8NHU2 1237 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 RAPGEF5Q92565 580 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 SHISA4Q96DD7 197 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 CENPOQ9BU64 300 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 TLR10Q9BXR5 811 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 RETREG1Q9H6L5 497 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 RBM12Q9NTZ6 932 aaKnown RBP7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 CWC25Q9NXE8 425 aaPredicted RBP7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 CNOT8Q9UFF9 292 aaKnown RBP7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 TSKSQ9UJT2 592 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 PLAAQ9Y263 795 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 PCDHB6Q9Y5E3 794 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 SMAD7O15105 426 aaKnown RBP7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 NPTXRO95502 500 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 ANXA1P04083 346 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 ZFYP08048 801 aaPredicted RBP7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 FERP16591 822 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 ZBED6P86452 979 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 LBRQ14739 615 aaKnown RBP7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 NAA25Q14CX7 972 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 CFAP58Q5T655 872 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 KCTD16Q68DU8 428 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 ASRGL1Q7L266 308 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 KRT77Q7Z794 578 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 TCEAL8Q8IYN2 117 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 GALNT15Q8N3T1 639 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 PPHLN1Q8NEY8 458 aaKnown RBP7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 CASKIN2Q8WXE0 1202 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 JPH3Q8WXH2 748 aaPredicted RBP7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 TRMT2BQ96GJ1 504 aaKnown RBP7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 TMEM87BQ96K49 555 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 MAP10Q9P2G4 905 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 CEP131Q9UPN4 1083 aa7.29□□□□□ -1.24
CDKAL1-202ENST00000378610 N4BP3O15049 544 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 TRIM37O94972 964 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 GNAZP19086 355 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 CCND1P24385 295 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 GBP2P32456 591 aaPredicted RBP7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 CCT6AP40227 531 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms