RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 MTMR6Q9Y217 621 aa23.04■■□□□ 1.28
TRIM13-203ENST00000378183 ARID2Q68CP9 1835 aa23.03■■□□□ 1.28
TRIM13-203ENST00000378183 CYP4A11Q02928 519 aa23.03■■□□□ 1.28
TRIM13-203ENST00000378183 LRIT3Q3SXY7 679 aa23.03■■□□□ 1.28
TRIM13-203ENST00000378183 OTOP2Q7RTS6 562 aa23.03■■□□□ 1.28
TRIM13-203ENST00000378183 KIAA0319LQ8IZA0 1049 aa23.03■■□□□ 1.28
TRIM13-203ENST00000378183 RNPC3Q96LT9 517 aaKnown RBP23.03■■□□□ 1.28
TRIM13-203ENST00000378183 SH2D3AQ9BRG2 576 aa23.03■■□□□ 1.28
TRIM13-203ENST00000378183 LXNQ9BS40 222 aa23.03■■□□□ 1.28
TRIM13-203ENST00000378183 CXXC1Q9P0U4 656 aaPredicted RBP23.03■■□□□ 1.28
TRIM13-203ENST00000378183 SEPT9Q9UHD8 586 aaPredicted RBP23.03■■□□□ 1.28
TRIM13-203ENST00000378183 DDX11L8A8MPP1 907 aa23.02■■□□□ 1.28
TRIM13-203ENST00000378183 RESTQ13127 1097 aa23.02■■□□□ 1.28
TRIM13-203ENST00000378183 IL17AQ16552 155 aa23.02■■□□□ 1.28
TRIM13-203ENST00000378183 BRAPQ7Z569 592 aa23.02■■□□□ 1.28
TRIM13-203ENST00000378183 RSPH3Q86UC2 560 aa23.02■■□□□ 1.28
TRIM13-203ENST00000378183 C4orf19Q8IY42 314 aa23.02■■□□□ 1.28
TRIM13-203ENST00000378183 LINC01465Q8N7H1 131 aa23.02■■□□□ 1.28
TRIM13-203ENST00000378183 FTOQ9C0B1 505 aaKnown RBP eCLIP23.02■■□□□ 1.289e-12■■■■□ 25.2
TRIM13-203ENST00000378183 LAMA2P24043 3122 aaKnown RBP23.02■■□□□ 1.27
TRIM13-203ENST00000378183 ZBTB39O15060 712 aa23.01■■□□□ 1.27
TRIM13-203ENST00000378183 STX6O43752 255 aa23.01■■□□□ 1.27
TRIM13-203ENST00000378183 FXR1P51114 621 aaKnown RBP eCLIP23.01■■□□□ 1.27
TRIM13-203ENST00000378183 FXR2P51116 673 aaKnown RBP eCLIP23.01■■□□□ 1.27
TRIM13-203ENST00000378183 MRPS6P82932 125 aaKnown RBP23.01■■□□□ 1.27
TRIM13-203ENST00000378183 TMEM62Q0P6H9 643 aa23.01■■□□□ 1.27
TRIM13-203ENST00000378183 MTERF2Q49AM1 385 aa23.01■■□□□ 1.27
TRIM13-203ENST00000378183 PLA2G4FQ68DD2 849 aa23.01■■□□□ 1.27
TRIM13-203ENST00000378183 TPH2Q8IWU9 490 aa23.01■■□□□ 1.27
TRIM13-203ENST00000378183 ZNF579Q8NAF0 562 aaKnown RBP23.01■■□□□ 1.27
TRIM13-203ENST00000378183 SPRYD3Q8NCJ5 442 aa23.01■■□□□ 1.27
TRIM13-203ENST00000378183 ZSWIM4Q9H7M6 989 aa23.01■■□□□ 1.27
TRIM13-203ENST00000378183 CDY2AQ9Y6F7 541 aa23.01■■□□□ 1.27
TRIM13-203ENST00000378183 PTPRSQ13332 1948 aa23.01■■□□□ 1.27
TRIM13-203ENST00000378183 MAGEB2O15479 319 aa23■■□□□ 1.27
TRIM13-203ENST00000378183 DKC1O60832 514 aaKnown RBP eCLIP23■■□□□ 1.27
TRIM13-203ENST00000378183 SPATA31C1P0DKV0 1188 aa23■■□□□ 1.27
TRIM13-203ENST00000378183 ATP2C1P98194 919 aaPredicted RBP23■■□□□ 1.27
TRIM13-203ENST00000378183 NME8Q8N427 588 aa23■■□□□ 1.27
TRIM13-203ENST00000378183 NEK9Q8TD19 979 aa23■■□□□ 1.27
TRIM13-203ENST00000378183 MYH15Q9Y2K3 1946 aa23■■□□□ 1.27
TRIM13-203ENST00000378183 LAD1O00515 517 aa22.99■■□□□ 1.27
TRIM13-203ENST00000378183 MED24O75448 989 aa22.99■■□□□ 1.27
TRIM13-203ENST00000378183 LYPLA2O95372 231 aa22.99■■□□□ 1.27
TRIM13-203ENST00000378183 RPLP2P05387 115 aaKnown RBP22.99■■□□□ 1.27
TRIM13-203ENST00000378183 YWHABP31946 246 aaKnown RBP22.99■■□□□ 1.27
TRIM13-203ENST00000378183 PRPHP41219 470 aa22.99■■□□□ 1.27
TRIM13-203ENST00000378183 CLCN3P51790 818 aa22.99■■□□□ 1.27
TRIM13-203ENST00000378183 NPEPPSP55786 919 aa22.99■■□□□ 1.27
TRIM13-203ENST00000378183 PLEKHG4Q58EX7 1191 aa22.99■■□□□ 1.27
TRIM13-203ENST00000378183 EFCAB12Q6NXP0 572 aa22.99■■□□□ 1.27
TRIM13-203ENST00000378183 CNKSR3Q6P9H4 555 aa22.99■■□□□ 1.27
TRIM13-203ENST00000378183 LRRC71Q8N4P6 559 aa22.99■■□□□ 1.27
TRIM13-203ENST00000378183 METTL13Q8N6R0 699 aa22.99■■□□□ 1.27
TRIM13-203ENST00000378183 CYP26B1Q9NR63 512 aa22.99■■□□□ 1.27
TRIM13-203ENST00000378183 GBF1Q92538 1859 aa22.98■■□□□ 1.27
TRIM13-203ENST00000378183 MICAL3Q7RTP6 2002 aa22.98■■□□□ 1.27
TRIM13-203ENST00000378183 IGKV6-21A0A0C4DH24 114 aa22.98■■□□□ 1.27
TRIM13-203ENST00000378183 HSP90AA1P07900 732 aaKnown RBP22.98■■□□□ 1.27
TRIM13-203ENST00000378183 MKRN4PQ13434 485 aaPredicted RBP22.98■■□□□ 1.27
TRIM13-203ENST00000378183 IER5Q5VY09 327 aa22.98■■□□□ 1.27
TRIM13-203ENST00000378183 FAM109BQ6ICB4 259 aaPredicted RBP22.98■■□□□ 1.27
TRIM13-203ENST00000378183 FAM173BQ6P4H8 233 aa22.98■■□□□ 1.27
TRIM13-203ENST00000378183 CATSPER3Q86XQ3 398 aa22.98■■□□□ 1.27
TRIM13-203ENST00000378183 IGSF22Q8N9C0 903 aa22.98■■□□□ 1.27
TRIM13-203ENST00000378183 DBF4BQ8NFT6 615 aa22.98■■□□□ 1.27
TRIM13-203ENST00000378183 LRCH3Q96II8 777 aa22.98■■□□□ 1.27
TRIM13-203ENST00000378183 CDHR5Q9HBB8 845 aa22.98■■□□□ 1.27
TRIM13-203ENST00000378183 TRPV2Q9Y5S1 764 aa22.98■■□□□ 1.27
TRIM13-203ENST00000378183 A0A087WWV3 80 aa22.97■■□□□ 1.27
TRIM13-203ENST00000378183 ACTN1P12814 892 aa22.97■■□□□ 1.27
TRIM13-203ENST00000378183 TBC1D8BQ0IIM8 1120 aa22.97■■□□□ 1.27
TRIM13-203ENST00000378183 DRP2Q13474 957 aa22.97■■□□□ 1.27
TRIM13-203ENST00000378183 PDIA5Q14554 519 aa22.97■■□□□ 1.27
TRIM13-203ENST00000378183 LPIN1Q14693 890 aa22.97■■□□□ 1.27
TRIM13-203ENST00000378183 TMEM266Q2M3C6 531 aa22.97■■□□□ 1.27
TRIM13-203ENST00000378183 FBXO47Q5MNV8 452 aa22.97■■□□□ 1.27
TRIM13-203ENST00000378183 POLR3CQ9BUI4 534 aaPredicted RBP22.97■■□□□ 1.27
TRIM13-203ENST00000378183 CELF4Q9BZC1 486 aaKnown RBP22.97■■□□□ 1.27
TRIM13-203ENST00000378183 SUGCTQ9HAC7 445 aa22.97■■□□□ 1.27
TRIM13-203ENST00000378183 TUFT1Q9NNX1 390 aa22.97■■□□□ 1.27
TRIM13-203ENST00000378183 MAFO75444 373 aaPredicted RBP22.96■■□□□ 1.27
TRIM13-203ENST00000378183 VTNP04004 478 aa22.96■■□□□ 1.27
TRIM13-203ENST00000378183 GHRP10912 638 aa22.96■■□□□ 1.27
TRIM13-203ENST00000378183 DTHD1Q6ZMT9 781 aa22.96■■□□□ 1.27
TRIM13-203ENST00000378183 CEP170P1Q96L14 293 aa22.96■■□□□ 1.27
TRIM13-203ENST00000378183 LRWD1Q9UFC0 647 aa22.96■■□□□ 1.27
TRIM13-203ENST00000378183 KDM3AQ9Y4C1 1321 aa22.96■■□□□ 1.27
TRIM13-203ENST00000378183 PP2D1A8MPX8 630 aa22.95■■□□□ 1.26
TRIM13-203ENST00000378183 ZBBXA8MT70 800 aa22.95■■□□□ 1.26
TRIM13-203ENST00000378183 GRXCR1A8MXD5 290 aa22.95■■□□□ 1.26
TRIM13-203ENST00000378183 GPR32O75388 356 aa22.95■■□□□ 1.26
TRIM13-203ENST00000378183 BAIAP3O94812 1187 aa22.95■■□□□ 1.26
TRIM13-203ENST00000378183 RPA1P27694 616 aa22.95■■□□□ 1.26
TRIM13-203ENST00000378183 SF3A1Q15459 793 aaKnown RBP22.95■■□□□ 1.26
TRIM13-203ENST00000378183 ECM1Q16610 540 aa22.95■■□□□ 1.26
TRIM13-203ENST00000378183 OTUD6AQ7L8S5 288 aa22.95■■□□□ 1.26
TRIM13-203ENST00000378183 PPP1R16BQ96T49 567 aa22.95■■□□□ 1.26
TRIM13-203ENST00000378183 MTIF3Q9H2K0 278 aaKnown RBP22.95■■□□□ 1.26
TRIM13-203ENST00000378183 AGO3Q9H9G7 860 aaKnown RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms