RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 NPR1P16066 1061 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 PABPC4Q13310 644 aaKnown RBP eCLIP11.68□□□□□ -0.546e-9■■□□□ 12.5
ABCF1-202ENST00000376545 KDM7AQ6ZMT4 941 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 TMEM179Q6ZVK1 233 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 TPCN2Q8NHX9 752 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 ATRNL1Q5VV63 1379 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 F5H6K3 240 aa11.67□□□□□ -0.54
ABCF1-202ENST00000376545 EPS15P42566 896 aa11.67□□□□□ -0.54
ABCF1-202ENST00000376545 TNNC1P63316 161 aa11.67□□□□□ -0.54
ABCF1-202ENST00000376545 ARID5AQ03989 594 aa11.67□□□□□ -0.54
ABCF1-202ENST00000376545 KLRC3Q07444 240 aa11.67□□□□□ -0.54
ABCF1-202ENST00000376545 RPS6KA1Q15418 735 aa11.67□□□□□ -0.54
ABCF1-202ENST00000376545 DOK7Q18PE1 504 aa11.67□□□□□ -0.54
ABCF1-202ENST00000376545 ALKBH5Q6P6C2 394 aaKnown RBP11.67□□□□□ -0.54
ABCF1-202ENST00000376545 PODNQ7Z5L7 613 aa11.67□□□□□ -0.54
ABCF1-202ENST00000376545 FBXO11Q86XK2 927 aa11.67□□□□□ -0.54
ABCF1-202ENST00000376545 HSD17B14Q9BPX1 270 aa11.67□□□□□ -0.54
ABCF1-202ENST00000376545 SYT11Q9BT88 431 aa11.67□□□□□ -0.54
ABCF1-202ENST00000376545 RUSC1Q9BVN2 902 aa11.67□□□□□ -0.54
ABCF1-202ENST00000376545 MEIS1O00470 390 aa11.67□□□□□ -0.54
ABCF1-202ENST00000376545 GAP43P17677 238 aa11.67□□□□□ -0.54
ABCF1-202ENST00000376545 RPL13P26373 211 aaKnown RBP11.67□□□□□ -0.54
ABCF1-202ENST00000376545 SEC14L1Q92503 715 aa11.67□□□□□ -0.54
ABCF1-202ENST00000376545 UIMC1Q96RL1 719 aa11.67□□□□□ -0.54
ABCF1-202ENST00000376545 TAF1DQ9H5J8 278 aaPredicted RBP11.67□□□□□ -0.54
ABCF1-202ENST00000376545 SUCLA2Q9P2R7 463 aaPredicted RBP11.67□□□□□ -0.54
ABCF1-202ENST00000376545 RSPH10B2B2RC85 870 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 RSPH10BP0C881 870 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 CASP4P49662 377 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 SYDE2Q5VT97 1194 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 CCDC43Q96MW1 224 aaKnown RBP11.66□□□□□ -0.54
ABCF1-202ENST00000376545 FIZ1Q96SL8 496 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 EIF2AK1Q9BQI3 630 aaKnown RBP11.66□□□□□ -0.54
ABCF1-202ENST00000376545 TTC7AQ9ULT0 858 aaPredicted RBP11.66□□□□□ -0.54
ABCF1-202ENST00000376545 ATXN2Q99700 1313 aaKnown RBP11.66□□□□□ -0.54
ABCF1-202ENST00000376545 ESYT3A0FGR9 886 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 EML1O00423 815 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 FLOT1O75955 427 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 KRT14P02533 472 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 ALDH1B1P30837 517 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 CUL1Q13616 776 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 TRADDQ15628 312 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 CFAP58Q5T655 872 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 RINT1Q6NUQ1 792 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 LRIG3Q6UXM1 1119 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 PAGR1Q9BTK6 254 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 TRIM34Q9BYJ4 488 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 PLEKHA4Q9H4M7 779 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 TUFT1Q9NNX1 390 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 PCDHAC2Q9Y5I4 1007 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 SMCHD1A6NHR9 2005 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 SPDYE3A6NKU9 549 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 SRRM3A6NNA2 597 aaPredicted RBP11.66□□□□□ -0.54
ABCF1-202ENST00000376545 H0YGN5 161 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 DDX3XO00571 662 aaKnown RBP eCLIP11.66□□□□□ -0.546e-21■■■■■ 26.8
ABCF1-202ENST00000376545 NDUFB10O96000 172 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 MUTP22033 750 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 POLD1P28340 1107 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 ERVK-9P63128 1117 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 GNGT1P63211 74 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 ICA1Q05084 483 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 C1orf186Q6ZWK4 172 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 EFCAB13Q8IY85 973 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 HES6Q96HZ4 224 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 SPAG5Q96R06 1193 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 RUFY1Q96T51 708 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 MKNK1Q9BUB5 465 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 BCAS3Q9H6U6 928 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 NFS1Q9Y697 457 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 UBE4BO95155 1302 aa11.66□□□□□ -0.54
ABCF1-202ENST00000376545 NCANO14594 1321 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 KCNK3O14649 394 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 ZNF131P52739 623 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 KCNA1Q09470 495 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 PPP2R5CQ13362 524 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 STRIP1Q5VSL9 837 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 OTOP1Q7RTM1 612 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 METTL13Q8N6R0 699 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 TAF4BQ92750 862 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.65□□□□□ -0.541e-9■■□□□ 11.6
ABCF1-202ENST00000376545 FAM107BQ9H098 131 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 BHMT2Q9H2M3 363 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 KCNQ5Q9NR82 932 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 DMAC2Q9NW81 257 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 RABGAP1Q9Y3P9 1069 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 DAAM1Q9Y4D1 1078 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 FRMPD4Q14CM0 1322 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 FAM196BA6NMK8 535 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 CCDC188H7C350 402 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 PSMD10O75832 226 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 SLITRK3O94933 977 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 FERP16591 822 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 DACT2Q5SW24 774 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 NT5DC3Q86UY8 548 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 SEPT12Q8IYM1 358 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 CYP2W1Q8TAV3 490 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 IFT81Q8WYA0 676 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 GPR88Q9GZN0 384 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 ZHX3Q9H4I2 956 aa11.65□□□□□ -0.54
ABCF1-202ENST00000376545 EP400Q96L91 3159 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms