RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 SAMM50Q9Y512 469 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 LGR5O75473 907 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 FAM13AO94988 1023 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 PTGS1P23219 599 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 DNM2P50570 870 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 UGCGQ16739 394 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 XKR3Q5GH77 459 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 CCDC112Q8NEF3 446 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 HPS3Q969F9 1004 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 EMID1Q96A84 441 aaPredicted RBP12.29□□□□□ -0.44
PDPN-202ENST00000376057 VTA1Q9NP79 307 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 SLC15A5A6NIM6 579 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 TPM2P07951 284 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 UBA1P22314 1058 aaKnown RBP12.29□□□□□ -0.44
PDPN-202ENST00000376057 MSNP26038 577 aaKnown RBP12.29□□□□□ -0.44
PDPN-202ENST00000376057 ARID5BQ14865 1188 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 TMC6Q7Z403 805 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 DAW1Q8N136 415 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 GOLGA5Q8TBA6 731 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 CCDC102AQ96A19 550 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 NTPCRQ9BSD7 190 aaKnown RBP12.29□□□□□ -0.44
PDPN-202ENST00000376057 PORCNQ9H237 461 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 TYW1Q9NV66 732 aaKnown RBP12.29□□□□□ -0.44
PDPN-202ENST00000376057 PCDHB13Q9Y5F0 798 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.29□□□□□ -0.44
PDPN-202ENST00000376057 CALUO43852 315 aaPredicted RBP12.29□□□□□ -0.44
PDPN-202ENST00000376057 PEX10O60683 326 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 PLS3P13797 630 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 HOXD13P35453 343 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 PPP2R3AQ06190 1150 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 FSTL1Q12841 308 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 ANO5Q75V66 913 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 RETREG2Q8NC44 543 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 KIAA1524Q8TCG1 905 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 SPIRE2Q8WWL2 714 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 KIFAP3Q92845 792 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 CCDC51Q96ER9 411 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 PKD2L1Q9P0L9 805 aa12.29□□□□□ -0.44
PDPN-202ENST00000376057 LARSQ9P2J5 1176 aaKnown RBP12.29□□□□□ -0.44
PDPN-202ENST00000376057 DOCK5Q9H7D0 1870 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 MYH11P35749 1972 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 ZBTB39O15060 712 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 SLC16A3O15427 465 aaKnown RBP12.28□□□□□ -0.44
PDPN-202ENST00000376057 DGAT1O75907 488 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 FECHP22830 423 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 SLC26A2P50443 739 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 FIGNQ5HY92 759 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 CELF3Q5SZQ8 465 aaKnown RBP12.28□□□□□ -0.44
PDPN-202ENST00000376057 PLPPR4Q7Z2D5 763 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 SLC9A9Q8IVB4 645 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 C12orf56Q8IXR9 622 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 CACTINQ8WUQ7 758 aaKnown RBP12.28□□□□□ -0.44
PDPN-202ENST00000376057 CNOT6LQ96LI5 555 aaKnown RBP12.28□□□□□ -0.44
PDPN-202ENST00000376057 R3HDMLQ9H3Y0 253 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 MRPL44Q9H9J2 332 aaKnown RBP12.28□□□□□ -0.44
PDPN-202ENST00000376057 SPTLC3Q9NUV7 552 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 GABBR1Q9UBS5 961 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 UTRNP46939 3433 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 GSTTP1A0A1W2PQM5 241 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 ZNF862O60290 1169 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 HIP1RO75146 1068 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 CLCN1P35523 988 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 NCKAP1LP55160 1127 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 FAM160B1Q5W0V3 765 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 EXOC8Q8IYI6 725 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 MYCT1Q8N699 235 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 ANKRD13CQ8N6S4 541 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 MCPH1Q8NEM0 835 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 PANX2Q96RD6 677 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 ERGIC2Q96RQ1 377 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 TUBGCP2Q9BSJ2 902 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 FGFBP2Q9BYJ0 223 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 EFCC1Q9HA90 598 aa12.28□□□□□ -0.44
PDPN-202ENST00000376057 EMSYQ7Z589 1322 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 SIP14410 1827 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 FAM155AB1AL88 458 aaPredicted RBP12.27□□□□□ -0.44
PDPN-202ENST00000376057 RSPH10B2B2RC85 870 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 N4BP3O15049 544 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 RSPH10BP0C881 870 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 RPL13P26373 211 aaKnown RBP12.27□□□□□ -0.44
PDPN-202ENST00000376057 ZNF157P51786 506 aaPredicted RBP12.27□□□□□ -0.44
PDPN-202ENST00000376057 MAN2A1Q16706 1144 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 MIIPQ5JXC2 388 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 SWSAP1Q6NVH7 229 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 ARMCX5Q6P1M9 558 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 FRMD5Q7Z6J6 570 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 PLEKHH3Q7Z736 793 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 GLIS3Q8NEA6 775 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 SCFD2Q8WU76 684 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 SEPT1Q8WYJ6 367 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 FAM167AQ96KS9 214 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 CEP89Q96ST8 783 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 NUP58Q9BVL2 599 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 TMEM206Q9H813 350 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 ZNF302Q9NR11 478 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 SLC5A4Q9NY91 659 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.27□□□□□ -0.44
PDPN-202ENST00000376057 FAM184BQ9ULE4 1060 aa12.27□□□□□ -0.44
PDPN-202ENST00000376057 BACH1O14867 736 aa12.27□□□□□ -0.45
PDPN-202ENST00000376057 PGK2P07205 417 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms