RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 TOGARAM2Q6ZUX3 1019 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 S100BP04271 92 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-204ENST00000375290 CD19P15391 556 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 NLRP11P59045 1033 aaKnown RBP10.91□□□□□ -0.66
PTCH1-204ENST00000375290 FRMD5Q7Z6J6 570 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 ATP6V0A4Q9HBG4 840 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 EMILIN3Q9NT22 766 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 BIN2Q9UBW5 565 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-204ENST00000375290 ABLIM1O14639 778 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 MAP3K7CLP57077 242 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 NXNQ6DKJ4 435 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 AS3MTQ9HBK9 375 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 TTLL1O95922 423 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 IFNA8P32881 189 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 MYO1EQ12965 1108 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 ARHGAP44Q17R89 818 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 KAZNQ674X7 775 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 PLIN2Q99541 437 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 ZBED4O75132 1171 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 EIF2S1P05198 315 aaKnown RBP10.91□□□□□ -0.66
PTCH1-204ENST00000375290 NFKBIAP25963 317 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 LSP1P33241 339 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 ODR4Q5SWX8 454 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 CCDC127Q96BQ5 260 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 ADPGKQ9BRR6 497 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 SPC25Q9HBM1 224 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 SLC39A2Q9NP94 309 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 AP4S1Q9Y587 144 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 ERVV-1B6SEH8 477 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 ECE1P42892 770 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 TAF1BQ53T94 588 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-204ENST00000375290 FIGNQ5HY92 759 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 CNBD1Q8NA66 436 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 CXorf38Q8TB03 319 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.91□□□□□ -0.66
PTCH1-204ENST00000375290 TRIM62Q9BVG3 475 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 UVRAGQ9P2Y5 699 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 USTQ9Y2C2 406 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 CLTCL1P53675 1640 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 HPCAL4Q9UM19 191 aa10.91□□□□□ -0.66
PTCH1-204ENST00000375290 MTO1Q9Y2Z2 717 aaKnown RBP10.91□□□□□ -0.66
PTCH1-204ENST00000375290 KLHL2O95198 593 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 MARK3P27448 753 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 OR9Q1Q8NGQ5 310 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 RNF34Q969K3 372 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 FAM89AQ96GI7 184 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 OSBPL1AQ9BXW6 950 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 KIAA1024Q9UPX6 916 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 POC1B-GALNT4F8VUJ3 575 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 CCZ1BP86790 482 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 CCZ1P86791 482 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-204ENST00000375290 SLC18A3Q16572 532 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 TMEM2Q9UHN6 1383 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 GNGT2O14610 69 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 GHRP10912 638 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 C1orf146Q5VVC0 180 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 TRPM8Q7Z2W7 1104 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 PARP3Q9Y6F1 533 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 LRRIQ3A6PVS8 624 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-204ENST00000375290 RPS6KA5O75582 802 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 ZRANB2O95218 330 aaKnown RBP eCLIP10.9□□□□□ -0.66
PTCH1-204ENST00000375290 VHLP40337 213 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 CRELD2Q6UXH1 353 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-204ENST00000375290 MPP6Q9NZW5 540 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 POTEFA5A3E0 1075 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 TMCC1O94876 653 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 POTEIP0CG38 1075 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 ARL4AP40617 200 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 GRAMD1BQ3KR37 738 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 POTEEQ6S8J3 1075 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 CEP19Q96LK0 163 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 EPS8L2Q9H6S3 715 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 PTPN22Q9Y2R2 807 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 LEMD3Q9Y2U8 911 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 AFG3L2Q9Y4W6 797 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 PALM3A6NDB9 673 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-204ENST00000375290 MXI1P50539 228 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 ARFIP2P53365 341 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 ZNF827Q17R98 1081 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 CCNI2Q6ZMN8 369 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-204ENST00000375290 DHX36Q9H2U1 1008 aaKnown RBP10.9□□□□□ -0.66
PTCH1-204ENST00000375290 TMEM191BP0C7N4 346 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 CDH2P19022 906 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-204ENST00000375290 RCN2Q14257 317 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 PDIA5Q14554 519 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 DNAJC24Q6P3W2 148 aa10.9□□□□□ -0.66
PTCH1-204ENST00000375290 ELAC2Q9BQ52 826 aaKnown RBP10.9□□□□□ -0.66
PTCH1-204ENST00000375290 EML4Q9HC35 981 aaKnown RBP10.9□□□□□ -0.66
PTCH1-204ENST00000375290 CHCHD3Q9NX63 227 aaKnown RBP10.9□□□□□ -0.66
PTCH1-204ENST00000375290 NLRP1Q9C000 1473 aa10.9□□□□□ -0.67
PTCH1-204ENST00000375290 H0Y626 953 aa10.9□□□□□ -0.67
PTCH1-204ENST00000375290 TRIM16O95361 564 aa10.9□□□□□ -0.67
PTCH1-204ENST00000375290 MAGEA13PA6NCF6 341 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 NVLO15381 856 aaKnown RBP10.89□□□□□ -0.67
PTCH1-204ENST00000375290 HSPA1AP0DMV8 641 aaKnown RBP10.89□□□□□ -0.67
PTCH1-204ENST00000375290 HSPA1BP0DMV9 641 aaKnown RBP10.89□□□□□ -0.67
PTCH1-204ENST00000375290 EDRF1Q3B7T1 1238 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 OTUD7BQ6GQQ9 843 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 NELFCDQ8IXH7 590 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 FAM133AQ8N9E0 248 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms