RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 ZFP91Q96JP5 570 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 SPATA33Q96N06 139 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 NAP1L4Q99733 375 aaKnown RBP12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 PDCD2LQ9BRP1 358 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 MAF1Q9H063 256 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 SRPRBQ9Y5M8 271 aaKnown RBP12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 MYH15Q9Y2K3 1946 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 RALGAPA2Q2PPJ7 1873 aa12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 PI4K2BG5E9Z4 385 aa12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 CCNT1O60563 726 aaKnown RBP12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 CTSHP09668 335 aa12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 HOXA13P31271 388 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 SSTR3P32745 418 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 USP11P51784 963 aa12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 LETM2Q2VYF4 491 aa12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 PTCRAQ6ISU1 281 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 CAVIN1Q6NZI2 390 aaKnown RBP12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 SERINC5Q86VE9 423 aa12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 FAM178BQ8IXR5 827 aa12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 GJD3Q8N144 294 aa12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 C4orf32Q8N8J7 132 aa12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 FSIP1Q8NA03 581 aa12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 ZNF579Q8NAF0 562 aaKnown RBP12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 SP7Q8TDD2 431 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 MRPS27Q92552 414 aaKnown RBP12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 GZF1Q9H116 711 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 FBXO2Q9UK22 296 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 ARIH1Q9Y4X5 557 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 INSL6Q9Y581 213 aa12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 MYO7AQ13402 2215 aa12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 COL4A6Q14031 1691 aa12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 EMSYQ7Z589 1322 aa12.31□□□□□ -0.44
HLA-DQA1-202ENST00000374949 SPDYE3A6NKU9 549 aa12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 RSPH10B2B2RC85 870 aa12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 H3BQ06 376 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 LAD1O00515 517 aa12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 WNT7AO00755 349 aa12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 LETM1O95202 739 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 RSPH10BP0C881 870 aa12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 LIG1P18858 919 aa12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 HTRA4P83105 476 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 ATP2C1P98194 919 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 SP2Q02086 613 aa12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 GHRHRQ02643 423 aa12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 PGM5Q15124 567 aa12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 CELF3Q5SZQ8 465 aaKnown RBP12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 ARL6IP4Q66PJ3 421 aaKnown RBP12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 PPP4R3AQ6IN85 833 aa12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 CCDC73Q6ZRK6 1079 aa12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 MRPL38Q96DV4 380 aaKnown RBP12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 CLIC6Q96NY7 704 aa12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 C16orf70Q9BSU1 422 aa12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 ANO3Q9BYT9 981 aa12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 OSBPL7Q9BZF2 842 aa12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 MAP3K20Q9NYL2 800 aaKnown RBP12.3□□□□□ -0.44
HLA-DQA1-202ENST00000374949 C17orf102A2RUQ5 167 aa12.29□□□□□ -0.44
HLA-DQA1-202ENST00000374949 PPFIA4O75335 1185 aa12.29□□□□□ -0.44
HLA-DQA1-202ENST00000374949 SMIM10L2AP0DMW4 78 aa12.29□□□□□ -0.44
HLA-DQA1-202ENST00000374949 SMIM10L2BP0DMW5 78 aa12.29□□□□□ -0.44
HLA-DQA1-202ENST00000374949 FAM160A1Q05DH4 1040 aa12.29□□□□□ -0.44
HLA-DQA1-202ENST00000374949 EPC2Q52LR7 807 aa12.29□□□□□ -0.44
HLA-DQA1-202ENST00000374949 TIGD5Q53EQ6 642 aa12.29□□□□□ -0.44
HLA-DQA1-202ENST00000374949 PLEKHG4Q58EX7 1191 aa12.29□□□□□ -0.44
HLA-DQA1-202ENST00000374949 CCDC183Q5T5S1 534 aa12.29□□□□□ -0.44
HLA-DQA1-202ENST00000374949 RESP18Q5W5W9 173 aa12.29□□□□□ -0.44
HLA-DQA1-202ENST00000374949 ATP6V0A1Q93050 837 aa12.29□□□□□ -0.44
HLA-DQA1-202ENST00000374949 YME1L1Q96TA2 773 aa12.29□□□□□ -0.44
HLA-DQA1-202ENST00000374949 BCAS3Q9H6U6 928 aa12.29□□□□□ -0.44
HLA-DQA1-202ENST00000374949 EHMT1Q9H9B1 1298 aa12.29□□□□□ -0.44
HLA-DQA1-202ENST00000374949 DDX19AQ9NUU7 478 aaKnown RBP12.29□□□□□ -0.44
HLA-DQA1-202ENST00000374949 FAM13BQ9NYF5 915 aa12.29□□□□□ -0.44
HLA-DQA1-202ENST00000374949 TMEM63CQ9P1W3 806 aa12.29□□□□□ -0.44
HLA-DQA1-202ENST00000374949 CYP3A7-CYP3A51PA0A087WV96 503 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 A0A1B0GVL5 298 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 TREHO43280 583 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 EDIL3O43854 480 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 UPP2O95045 317 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 LGALS2P05162 132 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 GCFC2P16383 781 aaKnown RBP12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 CYP3A7P24462 503 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 CCND2P30279 289 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 HOXC8P31273 242 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 PRPHP41219 470 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 PTPROQ16827 1216 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 TCEAL5Q5H9L2 206 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 KCNV1Q6PIU1 500 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 SHC4Q6S5L8 630 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 DTHD1Q6ZMT9 781 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 EP400NLQ6ZTU2 488 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 VSIG10LQ86VR7 867 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 FCHSD1Q86WN1 690 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 TRIM50Q86XT4 487 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 ENGASEQ8NFI3 743 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 SEPT8Q92599 483 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 GOLPH3LQ9H4A5 285 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 MLXIPQ9HAP2 919 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 DACT1Q9NYF0 836 aa12.28□□□□□ -0.44
HLA-DQA1-202ENST00000374949 FAM237AA0A1B0GTK4 181 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms