RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 ATMINO43313 823 aaPredicted RBP11.82□□□□□ -0.52
CXCL12-203ENST00000374429 HIP1RO75146 1068 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 SLITRK3O94933 977 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 ASNSP08243 561 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 PAFAH1B1P43034 410 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 TNIP1Q15025 636 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 KNOP1Q1ED39 458 aaKnown RBP11.82□□□□□ -0.52
CXCL12-203ENST00000374429 CC2D1AQ6P1N0 951 aaPredicted RBP11.82□□□□□ -0.52
CXCL12-203ENST00000374429 SND1Q7KZF4 910 aaKnown RBP eCLIP11.82□□□□□ -0.52
CXCL12-203ENST00000374429 EGFL6Q8IUX8 553 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 RTKN2Q8IZC4 609 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 ALS2CR12Q96Q35 445 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 FRMD4BQ9Y2L6 1034 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 NID2Q14112 1375 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 PPP1R12BO60237 982 aaPredicted RBP11.82□□□□□ -0.52
CXCL12-203ENST00000374429 KLRC1P26715 233 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 MAP2K1Q02750 393 aaPredicted RBP11.82□□□□□ -0.52
CXCL12-203ENST00000374429 KCNMA1Q12791 1236 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 ZNF211Q13398 564 aaPredicted RBP11.82□□□□□ -0.52
CXCL12-203ENST00000374429 MTERF2Q49AM1 385 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 STYK1Q6J9G0 422 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 ZBTB10Q96DT7 871 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 MTMR8Q96EF0 704 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 IDI2Q9BXS1 227 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 PARVGQ9HBI0 331 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 PLCB1Q9NQ66 1216 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 KDM3AQ9Y4C1 1321 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 KRT5P13647 590 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 GCFC2P16383 781 aaKnown RBP11.82□□□□□ -0.52
CXCL12-203ENST00000374429 ITGB5P18084 799 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 TRIM14Q14142 442 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 PADI6Q6TGC4 694 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 GADL1Q6ZQY3 521 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 NLGN2Q8NFZ4 835 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 TAF4BQ92750 862 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 PI4K2AQ9BTU6 479 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 TEKT3Q9BXF9 490 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 LRRC27Q9C0I9 530 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 ANKFY1Q9P2R3 1169 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 SUGT1Q9Y2Z0 365 aa11.82□□□□□ -0.52
CXCL12-203ENST00000374429 ESYT2A0FGR8 921 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 USP11P51784 963 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 PTK2Q05397 1052 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 NCAPG2Q86XI2 1143 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 CBWD1Q9BRT8 395 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 LRRC1Q9BTT6 524 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 GGA3Q9NZ52 723 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 MYH8P13535 1937 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 ROBO3Q96MS0 1386 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 PVALEFA0A1B0GWK0 134 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 KLRG2A4D1S0 409 aaPredicted RBP11.81□□□□□ -0.52
CXCL12-203ENST00000374429 LRRC10BA6NIK2 292 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 DLG4P78352 724 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 SWSAP1Q6NVH7 229 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 ANKRD35Q8N283 1001 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 TAB3Q8N5C8 712 aaPredicted RBP11.81□□□□□ -0.52
CXCL12-203ENST00000374429 GPR161Q8N6U8 529 aaKnown RBP11.81□□□□□ -0.52
CXCL12-203ENST00000374429 KRT12Q99456 494 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 ERLIN1O75477 346 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 IGBP1P78318 339 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 TRADDQ15628 312 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 ZNF394Q53GI3 561 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 CCDC70Q6NSX1 233 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 RNF207Q6ZRF8 634 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 DAAM2Q86T65 1068 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 CCDC51Q96ER9 411 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 CEP170P1Q96L14 293 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 NUP58Q9BVL2 599 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 UBE2TQ9NPD8 197 aaPredicted RBP11.81□□□□□ -0.52
CXCL12-203ENST00000374429 SEPT9Q9UHD8 586 aaPredicted RBP11.81□□□□□ -0.52
CXCL12-203ENST00000374429 CLEC11AQ9Y240 323 aa11.81□□□□□ -0.52
CXCL12-203ENST00000374429 RPA1P27694 616 aa11.8□□□□□ -0.52
CXCL12-203ENST00000374429 TATDN1Q6P1N9 297 aa11.8□□□□□ -0.52
CXCL12-203ENST00000374429 LRRC55Q6ZSA7 311 aa11.8□□□□□ -0.52
CXCL12-203ENST00000374429 KAT5Q92993 513 aa11.8□□□□□ -0.52
CXCL12-203ENST00000374429 TOPORSQ9NS56 1045 aaPredicted RBP11.8□□□□□ -0.52
CXCL12-203ENST00000374429 RNF146Q9NTX7 359 aa11.8□□□□□ -0.52
CXCL12-203ENST00000374429 RNF19AQ9NV58 838 aa11.8□□□□□ -0.52
CXCL12-203ENST00000374429 FAN1Q9Y2M0 1017 aa11.8□□□□□ -0.52
CXCL12-203ENST00000374429 TMX2Q9Y320 296 aa11.8□□□□□ -0.52
CXCL12-203ENST00000374429 DDNO94850 711 aaPredicted RBP11.8□□□□□ -0.52
CXCL12-203ENST00000374429 FOSP01100 380 aaPredicted RBP11.8□□□□□ -0.52
CXCL12-203ENST00000374429 AFPP02771 609 aaKnown RBP11.8□□□□□ -0.52
CXCL12-203ENST00000374429 PLA2G4AP47712 749 aa11.8□□□□□ -0.52
CXCL12-203ENST00000374429 SLC12A3P55017 1021 aa11.8□□□□□ -0.52
CXCL12-203ENST00000374429 GUCY2DQ02846 1103 aa11.8□□□□□ -0.52
CXCL12-203ENST00000374429 LRRC63Q05C16 580 aa11.8□□□□□ -0.52
CXCL12-203ENST00000374429 ETNPPLQ8TBG4 499 aa11.8□□□□□ -0.52
CXCL12-203ENST00000374429 DPH5Q9H2P9 285 aa11.8□□□□□ -0.52
CXCL12-203ENST00000374429 DMGDHQ9UI17 866 aaKnown RBP11.8□□□□□ -0.52
CXCL12-203ENST00000374429 CALUO43852 315 aaPredicted RBP11.8□□□□□ -0.52
CXCL12-203ENST00000374429 BIRC3Q13489 604 aa11.8□□□□□ -0.52
CXCL12-203ENST00000374429 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.8□□□□□ -0.52
CXCL12-203ENST00000374429 OTOP1Q7RTM1 612 aa11.8□□□□□ -0.52
CXCL12-203ENST00000374429 NLRX1Q86UT6 975 aa11.8□□□□□ -0.52
CXCL12-203ENST00000374429 DDX42Q86XP3 938 aaKnown RBP eCLIP11.8□□□□□ -0.52
CXCL12-203ENST00000374429 PRPF38AQ8NAV1 312 aaKnown RBP11.8□□□□□ -0.52
CXCL12-203ENST00000374429 NOX5Q96PH1 765 aa11.8□□□□□ -0.52
CXCL12-203ENST00000374429 RUFY1Q96T51 708 aa11.8□□□□□ -0.52
CXCL12-203ENST00000374429 GABBR1Q9UBS5 961 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms