RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 PAGE5Q96GU1 130 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 PANX2Q96RD6 677 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 FAM96AQ9H5X1 160 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 BAIAP2L1Q9UHR4 511 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 MAP3K7O43318 606 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 SOX5P35711 763 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 TAF1BQ53T94 588 aaPredicted RBP11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 SLC10A5Q5PT55 438 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 THNSL1Q8IYQ7 743 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 ZNF560Q96MR9 790 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 TMEM247A6NEH6 219 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 CLNS1AP54105 237 aaKnown RBP11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 KRT33BQ14525 404 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 PADI6Q6TGC4 694 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 ENOSF1Q7L5Y1 443 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 SLC13A4Q9UKG4 626 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 ZNF500O60304 480 aaPredicted RBP11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 RBL2Q08999 1139 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 DRP2Q13474 957 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 ZNF568Q3ZCX4 644 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 KIAA1755Q5JYT7 1200 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 SLC35F6Q8N357 371 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 WHAMMQ8TF30 809 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 MMP19Q99542 508 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 TIPINQ9BVW5 301 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 DRC3Q9H069 523 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 PTPN22Q9Y2R2 807 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 GRIN3BO60391 1043 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 PSMA2P25787 234 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 RAD51Q06609 339 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 GRM4Q14833 912 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 SPOPLQ6IQ16 392 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 EFHBQ8N7U6 833 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 TRPV6Q9H1D0 765 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 TDRD3Q9H7E2 651 aaKnown RBP11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 IRAK4Q9NWZ3 460 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 ZNF212Q9UDV6 495 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 PRAMEF22A3QJZ6 481 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 NVLO15381 856 aaKnown RBP11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 SLC8A1P32418 973 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 STAT3P40763 770 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 QARSP47897 775 aaKnown RBP11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 PSMC5P62195 406 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 GPSM2P81274 684 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 TRIM28Q13263 835 aaKnown RBP11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 NECTIN1Q15223 517 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 ZNF699Q32M78 642 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 SPON1Q9HCB6 807 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 MARK3P27448 753 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 ALKBH5Q6P6C2 394 aaKnown RBP11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 PODXLO00592 558 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 EIF4A3P38919 411 aaKnown RBP11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 GPC3P51654 580 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 MKRN3Q13064 507 aaKnown RBP11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 VEPH1Q14D04 833 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 CCDC197Q8NCU1 140 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 RABEP2Q9H5N1 569 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 THEGQ9P2T0 379 aa11.91□□□□□ -0.5
PHACTR4-202ENST00000373839 KRT37O76014 449 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 EFNA5P52803 228 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 DPCR1Q3MIW9 517 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 ATG16L1Q676U5 607 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 TAB3Q8N5C8 712 aaPredicted RBP11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 GBP5Q96PP8 586 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 MRPL4Q9BYD3 311 aaKnown RBP11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 ADAM22Q9P0K1 906 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 DNAJC8O75937 253 aaPredicted RBP11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 RESTQ13127 1097 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 CUL1Q13616 776 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 HSP90AA5PQ58FG0 334 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 GJD4Q96KN9 370 aaPredicted RBP11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 GDAP1L1Q96MZ0 367 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 PCDHB6Q9Y5E3 794 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 CYP19A1P11511 503 aaPredicted RBP11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 PLTPP55058 493 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 CRB1P82279 1406 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 TXNRD1Q16881 649 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 TRIM72Q6ZMU5 477 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 VSTM4Q8IW00 320 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 SYNGAP1Q96PV0 1343 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 ZBTB18Q99592 522 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 DDX50Q9BQ39 737 aaKnown RBP11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 RAVER2Q9HCJ3 691 aaKnown RBP11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 NGRNQ9NPE2 291 aaKnown RBP11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 CEP72Q9P209 647 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 SPATA31A6Q5VVP1 1343 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 PTPROQ16827 1216 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 SCARA5Q6ZMJ2 495 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 GIPC2Q8TF65 315 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 CRAMP1Q96RY5 1269 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 PLEKHA4Q9H4M7 779 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 NHEJ1Q9H9Q4 299 aaPredicted RBP11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 DCP1AQ9NPI6 582 aaPredicted RBP11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 CYP26B1Q9NR63 512 aa11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 CPSF2Q9P2I0 782 aaKnown RBP11.9□□□□□ -0.5
PHACTR4-202ENST00000373839 CYP2D7A0A087X1C5 515 aa11.9□□□□□ -0.51
PHACTR4-202ENST00000373839 CLGNO14967 610 aa11.9□□□□□ -0.51
PHACTR4-202ENST00000373839 USP11P51784 963 aa11.9□□□□□ -0.51
PHACTR4-202ENST00000373839 KCNQ4P56696 695 aa11.9□□□□□ -0.51
PHACTR4-202ENST00000373839 TTC23LQ6PF05 361 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms