RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 TACC3Q9Y6A5 838 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 FTCDO95954 541 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 POLR2MP0CAP2 368 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 SCTRP47872 440 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 ZNF662Q6ZS27 426 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 TCP11Q8WWU5 503 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 SHISA4Q96DD7 197 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 COL5A3P25940 1745 aaPredicted RBP12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 USP17L15C9J2P7 530 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 USP17L13C9JLJ4 530 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 USP17L11C9JVI0 530 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 USP17L18D6R9N7 530 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 USP17L22D6RA61 530 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 USP17L17D6RBQ6 530 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 USP17L19D6RCP7 530 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 USP17L20D6RJB6 530 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 MYCP01106 439 aaPredicted RBP12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 HOXA13P31271 388 aaPredicted RBP12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 CAP2P40123 477 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 TRAPPC10P48553 1259 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 ARID5AQ03989 594 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 ITIH3Q06033 890 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 USP17L24Q0WX57 530 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 ACCSLQ4AC99 568 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 USP17L6PQ6QN14 398 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 ARMC9Q7Z3E5 817 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 CASKIN2Q8WXE0 1202 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 SEC16BQ96JE7 1060 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 SH3GLB2Q9NR46 395 aa12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 PACSIN2Q9UNF0 486 aaPredicted RBP12.19□□□□□ -0.46
RPRD1B-201ENST00000373433 hCG_1984214I3L0E3 225 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 CLTAP09496 248 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 CTNNA1P35221 906 aaKnown RBP12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 TECP42680 631 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 UBXN2AP68543 259 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 MKRN3Q13064 507 aaKnown RBP12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 MTMR2Q13614 643 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 PRR16Q569H4 304 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 RRAGAQ7L523 313 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 FAM160B2Q86V87 743 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 ZNF713Q8N859 430 aaPredicted RBP12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 UBLCP1Q8WVY7 318 aaPredicted RBP12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 HVCN1Q96D96 273 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 NAP1L4Q99733 375 aaKnown RBP12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 THAP9Q9H5L6 903 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 ARHGAP20Q9P2F6 1191 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 PALM3A6NDB9 673 aaPredicted RBP12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 PHF20L1A8MW92 1017 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 GLE1Q53GS7 698 aaKnown RBP12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 GKAP1Q5VSY0 366 aaPredicted RBP12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 C6orf89Q6UWU4 347 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 PROCA1Q8NCQ7 364 aaPredicted RBP12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 SPDL1Q96EA4 605 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 NOX5Q96PH1 765 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.18□□□□□ -0.467e-7■■■■■ 72.3
RPRD1B-201ENST00000373433 ADARB2Q9NS39 739 aaKnown RBP12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 PP2D1A8MPX8 630 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 CCNHP51946 323 aaPredicted RBP12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 HMGCS2P54868 508 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 ATP2C1P98194 919 aaPredicted RBP12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 PTPROQ16827 1216 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 PIK3R5Q8WYR1 880 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 TLR10Q9BXR5 811 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 ATP6V0A4Q9HBG4 840 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 GPRC5DQ9NZD1 345 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 SALL4Q9UJQ4 1053 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 C10orf71Q711Q0 1435 aa12.18□□□□□ -0.46
RPRD1B-201ENST00000373433 OR52Z1P0C646 297 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 CDC25CP30307 473 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 ASIC1P78348 528 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 GFPT1Q06210 699 aaPredicted RBP12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 PPP4R3AQ6IN85 833 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 RETREG2Q8NC44 543 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 VTI1AQ96AJ9 217 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 OTUD5Q96G74 571 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 SBF2Q86WG5 1849 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 RASSF10A6NK89 507 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 MTMR8Q96EF0 704 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 PHF20Q9BVI0 1012 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 TTYH3Q9C0H2 523 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 NOVA2Q9UNW9 492 aaKnown RBP12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 FGRP09769 529 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 PRLRP16471 622 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 FKBP1CQ5VVH2 108 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 CACNA2D4Q7Z3S7 1137 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 NSMCE1Q8WV22 266 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 SLC10A4Q96EP9 437 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 STAMBPL1Q96FJ0 436 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 NOD2Q9HC29 1040 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 TMEM260Q9NX78 707 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 DDX25Q9UHL0 483 aaKnown RBP12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 PCDHA12Q9UN75 941 aa12.17□□□□□ -0.46
RPRD1B-201ENST00000373433 SNX29Q8TEQ0 813 aa12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 WHAMMQ8TF30 809 aa12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 GDF3Q9NR23 364 aa12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 FZD1Q9UP38 647 aa12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 ZNF541Q9H0D2 1346 aa12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 CTNND1O60716 968 aaKnown RBP12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 FOSP01100 380 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms