RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 VWA3BQ502W6 1294 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 WDR78Q5VTH9 848 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 CNNM4Q6P4Q7 775 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 UNC13DQ70J99 1090 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 ERGIC2Q96RQ1 377 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 ZC3H12CQ9C0D7 883 aaKnown RBP7.04□□□□□ -1.28
CHD6-202ENST00000373222 GOLPH3Q9H4A6 298 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 HAUS4Q9H6D7 363 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 PSTPIP2Q9H939 334 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 RIC8AQ9NPQ8 531 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 VPS18Q9P253 973 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 ADAM21Q9UKJ8 722 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 SCAF8Q9UPN6 1271 aaKnown RBP7.04□□□□□ -1.28
CHD6-202ENST00000373222 SAR1BQ9Y6B6 198 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 SLX4Q8IY92 1834 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 BICDL2A1A5D9 508 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 TNFRSF10BO14763 440 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 ZBTB39O15060 712 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 STK10O94804 968 aaKnown RBP7.04□□□□□ -1.28
CHD6-202ENST00000373222 NOL4O94818 638 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 HOXA10P31260 410 aaPredicted RBP7.04□□□□□ -1.28
CHD6-202ENST00000373222 SLC1A4P43007 532 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 KIF11P52732 1056 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 RBM5P52756 815 aaKnown RBP eCLIP7.04□□□□□ -1.28
CHD6-202ENST00000373222 HNRNPH2P55795 449 aaKnown RBP7.04□□□□□ -1.28
CHD6-202ENST00000373222 CYP4A11Q02928 519 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 OCLNQ16625 522 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 SWI5Q1ZZU3 235 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 TMEM119Q4V9L6 283 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 ASPRV1Q53RT3 343 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 PRPF38BQ5VTL8 546 aaKnown RBP7.04□□□□□ -1.28
CHD6-202ENST00000373222 KRT79Q5XKE5 535 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 TMC7Q7Z402 723 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 BAP1Q92560 729 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 MTMR8Q96EF0 704 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 MS4A14Q96JA4 679 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 C8orf48Q96LL4 319 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 CCDC42Q96M95 316 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 ZBED2Q9BTP6 218 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 IFIH1Q9BYX4 1025 aaKnown RBP7.04□□□□□ -1.28
CHD6-202ENST00000373222 PCDHA12Q9UN75 941 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 PACSIN2Q9UNF0 486 aaPredicted RBP7.04□□□□□ -1.28
CHD6-202ENST00000373222 PCDHGB7Q9Y5F8 929 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 ESYT2A0FGR8 921 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 RSPH10B2B2RC85 870 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 TRAF5O00463 557 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 ZBTB5O15062 677 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 MYL1P05976 194 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 RSPH10BP0C881 870 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 ACTN1P12814 892 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 RNASE9P60153 205 aaKnown RBP7.03□□□□□ -1.28
CHD6-202ENST00000373222 UBXN2AP68543 259 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 BRD3Q15059 726 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 WHAMMP3Q1A5X7 153 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 ZNF394Q53GI3 561 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 ARSHQ5FYA8 562 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 FOXR1Q6PIV2 292 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 COL23A1Q86Y22 540 aaPredicted RBP7.03□□□□□ -1.28
CHD6-202ENST00000373222 TBC1D22AQ8WUA7 517 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 TBC1D5Q92609 795 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 PACSIN1Q9BY11 444 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 CUEDC2Q9H467 287 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 MAP3K20Q9NYL2 800 aaKnown RBP7.03□□□□□ -1.28
CHD6-202ENST00000373222 FAM198AQ9UFP1 575 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 SFMBT1Q9UHJ3 866 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 PLAGL2Q9UPG8 496 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 ATP6V0A2Q9Y487 856 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 PCDHA13Q9Y5I0 950 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 PCDHA1Q9Y5I3 950 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 DNMT3AQ9Y6K1 912 aaPredicted RBP7.03□□□□□ -1.28
CHD6-202ENST00000373222 PLIN4Q96Q06 1357 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 CFAP69A5D8W1 941 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 ZSCAN5CA6NGD5 496 aaPredicted RBP7.03□□□□□ -1.28
CHD6-202ENST00000373222 SFI1A8K8P3 1242 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 EIF3CLB5ME19 914 aaKnown RBP7.03□□□□□ -1.28
CHD6-202ENST00000373222 FAM86B1E9PN63 330 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 MEIS2O14770 477 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 KRT86O43790 486 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 EVI5O60447 810 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 FAM86B2P0C5J1 330 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 CRKP46108 304 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 LMAN1P49257 510 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 FAM193AP78312 1265 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 RASSF7Q02833 373 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 PABPC4Q13310 644 aaKnown RBP eCLIP7.03□□□□□ -1.28
CHD6-202ENST00000373222 CDC37Q16543 378 aaPredicted RBP7.03□□□□□ -1.28
CHD6-202ENST00000373222 SKIDA1Q1XH10 827 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 TMEM266Q2M3C6 531 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 ZCWPW2Q504Y3 356 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 PRR16Q569H4 304 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 PAPD7Q5XG87 772 aaKnown RBP7.03□□□□□ -1.28
CHD6-202ENST00000373222 HGSNATQ68CP4 663 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 GPBP1Q86WP2 473 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 SP8Q8IXZ3 490 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 GUF1Q8N442 669 aaKnown RBP7.03□□□□□ -1.28
CHD6-202ENST00000373222 CUL5Q93034 780 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 ZNF622Q969S3 477 aaKnown RBP eCLIP7.03□□□□□ -1.285e-8■■■□□ 16.2
CHD6-202ENST00000373222 CRAMP1Q96RY5 1269 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 EIF3CQ99613 913 aaKnown RBP7.03□□□□□ -1.28
CHD6-202ENST00000373222 PANK4Q9NVE7 773 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms