RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 M0QZ92 97 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 CYTH3O43739 400 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 SLC37A4O43826 429 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 KRT19P08727 400 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 POLR2BP30876 1174 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 PIK3CAP42336 1068 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 HMGCS2P54868 508 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 RNASE9P60153 205 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 CYP27A1Q02318 531 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 ALKBH5Q6P6C2 394 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 KCNV1Q6PIU1 500 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 RUFY4Q6ZNE9 571 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 ZNF365Q70YC5 407 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 FASTKD5Q7L8L6 764 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 DPP9Q86TI2 863 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 KLHL7Q8IXQ5 586 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 TC2NQ8N9U0 490 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 RDM1Q8NG50 284 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 GIMAP7Q8NHV1 300 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 PBKQ96KB5 322 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 PCIF1Q9H4Z3 704 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 SPC25Q9HBM1 224 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 ANKFY1Q9P2R3 1169 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 IKBKGQ9Y6K9 419 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 A0A1W2PQJ5 194 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 LRRC53A6NM62 1247 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 KRIT1O00522 736 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 EIF3DO15371 548 aaKnown RBP eCLIP5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 GAS8O95995 478 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 GBP1P32455 592 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 NSFP46459 744 aaKnown RBP5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 CXCL9Q07325 125 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 EHHADHQ08426 723 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 FUT2Q10981 343 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 PPFIA1Q13136 1202 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 GRB10Q13322 594 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 NCAPHQ15003 741 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 GRIK5Q16478 980 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 LONRF2Q1L5Z9 754 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 Q4G0T1 1027 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 E4F1Q66K89 784 aaPredicted RBP5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 DPH6Q7L8W6 267 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 SCYL3Q8IZE3 742 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 CCDC114Q96M63 670 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 RUNDC3BQ96NL0 473 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 PRM3Q9NNZ6 103 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 RNF181Q9P0P0 153 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 KIAA0391O15091 583 aaKnown RBP5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 STAM2O75886 525 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 GFPT2O94808 682 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 HSPA6P17066 643 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 SNRPFP62306 86 aaKnown RBP5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 ZRSR2Q15696 482 aaKnown RBP5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 EARS2Q5JPH6 523 aaKnown RBP5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 RNF187Q5TA31 235 aaPredicted RBP5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 ANGEL2Q5VTE6 544 aaKnown RBP5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 CCDC91Q7Z6B0 441 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 DEFB132Q7Z7B7 95 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 CERS5Q8N5B7 392 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 PAF1Q8N7H5 531 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 SYT2Q8N9I0 419 aaPredicted RBP5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 ERGIC2Q96RQ1 377 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 MKNK1Q9BUB5 465 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 MAK16Q9BXY0 300 aaKnown RBP5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 UBE2TQ9NPD8 197 aaPredicted RBP5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 RGL1Q9NZL6 768 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 ADAMTS1Q9UHI8 967 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 GINS2Q9Y248 185 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 PPP2R3BQ9Y5P8 575 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 COL18A1P39060 1754 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 SSU72P8A0A1W2PR75 194 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 IQCA1LA6NCM1 817 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 EBAG9O00559 213 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 ENC1O14682 589 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 SORBS3O60504 671 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 SCP2P22307 547 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 MAP2K1Q02750 393 aaPredicted RBP5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 R3HDM1Q15032 1099 aaKnown RBP5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 CDKAL1Q5VV42 579 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 SND1Q7KZF4 910 aaKnown RBP eCLIP5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 RASGRP2Q7LDG7 609 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 ACER1Q8TDN7 264 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 REEP2Q9BRK0 252 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 ST7Q9NRC1 585 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 GABBR1Q9UBS5 961 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 AGTPBP1Q9UPW5 1226 aa5.77□□□□□ -1.49
SMNDC1-202ENST00000369603 NHSL1Q5SYE7 1610 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 INO80B-WBP1J3KQ70 363 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 MSH4O15457 936 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 HIP1RO75146 1068 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 NR3C2P08235 984 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 ATP2A2P16615 1042 aaKnown RBP5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 ZNF18P17022 549 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 ATF7P17544 494 aaPredicted RBP5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 ATP5DP30049 168 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 YWHABP31946 246 aaKnown RBP5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 YARSP54577 528 aaKnown RBP5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 MAP3K9P80192 1104 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms