RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 SPATA20Q8TB22 786 aa16.62■□□□□ 0.25
PHTF1-202ENST00000369598 GLT8D2Q9H1C3 349 aa16.62■□□□□ 0.25
PHTF1-202ENST00000369598 MAGEC2Q9UBF1 373 aaPredicted RBP16.62■□□□□ 0.25
PHTF1-202ENST00000369598 EPHB6O15197 1021 aa16.61■□□□□ 0.25
PHTF1-202ENST00000369598 OR52Z1P0C646 297 aa16.61■□□□□ 0.25
PHTF1-202ENST00000369598 UBA7P41226 1012 aa16.61■□□□□ 0.25
PHTF1-202ENST00000369598 UBLCP1Q8WVY7 318 aaPredicted RBP16.61■□□□□ 0.25
PHTF1-202ENST00000369598 GSDMAQ96QA5 445 aa16.61■□□□□ 0.25
PHTF1-202ENST00000369598 AMNQ9BXJ7 453 aa16.61■□□□□ 0.25
PHTF1-202ENST00000369598 LIMA1Q9UHB6 759 aaKnown RBP16.61■□□□□ 0.25
PHTF1-202ENST00000369598 GOLGA6L10A6NI86 522 aa16.61■□□□□ 0.25
PHTF1-202ENST00000369598 GFPT1Q06210 699 aaPredicted RBP16.61■□□□□ 0.25
PHTF1-202ENST00000369598 TDRD12Q587J7 1177 aaKnown RBP16.61■□□□□ 0.25
PHTF1-202ENST00000369598 FBXO11Q86XK2 927 aa16.61■□□□□ 0.25
PHTF1-202ENST00000369598 CCDC155Q8N6L0 562 aa16.61■□□□□ 0.25
PHTF1-202ENST00000369598 ZCWPW1Q9H0M4 648 aa16.61■□□□□ 0.25
PHTF1-202ENST00000369598 ASNSP08243 561 aa16.6■□□□□ 0.25
PHTF1-202ENST00000369598 MAP3K10Q02779 954 aa16.6■□□□□ 0.25
PHTF1-202ENST00000369598 ZYXQ15942 572 aaKnown RBP16.6■□□□□ 0.25
PHTF1-202ENST00000369598 SPON1Q9HCB6 807 aa16.6■□□□□ 0.25
PHTF1-202ENST00000369598 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.6■□□□□ 0.25
PHTF1-202ENST00000369598 NOVA2Q9UNW9 492 aaKnown RBP16.6■□□□□ 0.25
PHTF1-202ENST00000369598 H7C1D1 291 aa16.6■□□□□ 0.25
PHTF1-202ENST00000369598 SCTRP47872 440 aa16.6■□□□□ 0.25
PHTF1-202ENST00000369598 SKOR1P84550 965 aa16.6■□□□□ 0.25
PHTF1-202ENST00000369598 USH1GQ495M9 461 aa16.6■□□□□ 0.25
PHTF1-202ENST00000369598 TUBGCP2Q9BSJ2 902 aa16.6■□□□□ 0.25
PHTF1-202ENST00000369598 SH2D4AQ9H788 454 aa16.6■□□□□ 0.25
PHTF1-202ENST00000369598 NLRC4Q9NPP4 1024 aa16.6■□□□□ 0.25
PHTF1-202ENST00000369598 HACL1Q9UJ83 578 aa16.6■□□□□ 0.25
PHTF1-202ENST00000369598 TLDC2A0PJX2 215 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 USP17L15C9J2P7 530 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 USP17L13C9JLJ4 530 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 USP17L11C9JVI0 530 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 USP17L18D6R9N7 530 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 USP17L22D6RA61 530 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 USP17L17D6RBQ6 530 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 USP17L19D6RCP7 530 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 USP17L20D6RJB6 530 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 FAM107AO95990 144 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 RPN1P04843 607 aaKnown RBP16.59■□□□□ 0.25
PHTF1-202ENST00000369598 EIF4A3P38919 411 aaKnown RBP16.59■□□□□ 0.25
PHTF1-202ENST00000369598 STAT2P52630 851 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 USP17L24Q0WX57 530 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 ORC2Q13416 577 aaPredicted RBP16.59■□□□□ 0.25
PHTF1-202ENST00000369598 THEMIS2Q5TEJ8 643 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 USP17L6PQ6QN14 398 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 BTNL9Q6UXG8 535 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 CSGALNACT2Q8N6G5 542 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 KCNV2Q8TDN2 545 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 CLK2P49760 499 aaKnown RBP16.59■□□□□ 0.25
PHTF1-202ENST00000369598 EHHADHQ08426 723 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 FAM83BQ5T0W9 1011 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 SH3RF1Q7Z6J0 888 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 CASKIN2Q8WXE0 1202 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 ATP6V1G3Q96LB4 118 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 PRR12Q9ULL5 1215 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 TECP42680 631 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 TXKP42681 527 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 KIAA1755Q5JYT7 1200 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 PRCCQ92733 491 aaPredicted RBP16.59■□□□□ 0.25
PHTF1-202ENST00000369598 HVCN1Q96D96 273 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 SEC16BQ96JE7 1060 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 RPGRIP1Q96KN7 1286 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 AP1M1Q9BXS5 423 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 STK38LQ9Y2H1 464 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 PCDHA13Q9Y5I0 950 aa16.59■□□□□ 0.25
PHTF1-202ENST00000369598 ASTN2O75129 1339 aaPredicted RBP16.58■□□□□ 0.25
PHTF1-202ENST00000369598 STAT6P42226 847 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 CALCRLQ16602 461 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 ANKRD20A8PQ5CZ79 823 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 EMBQ6PCB8 327 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 RRAGAQ7L523 313 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 EHBP1Q8NDI1 1231 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 PIK3R5Q8WYR1 880 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 TEPSINQ96N21 525 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 LBHD1Q9BQE6 289 aaPredicted RBP16.58■□□□□ 0.24
PHTF1-202ENST00000369598 DEFB129Q9H1M3 183 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 CNOT8Q9UFF9 292 aaKnown RBP16.58■□□□□ 0.24
PHTF1-202ENST00000369598 ITIH6Q6UXX5 1313 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 GMNCA6NCL1 334 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 CTNNA1P35221 906 aaKnown RBP16.58■□□□□ 0.24
PHTF1-202ENST00000369598 ALS2CLQ60I27 953 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 KDM7AQ6ZMT4 941 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 FMNL3Q8IVF7 1028 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 IQCKQ8N0W5 287 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 CHURC1Q8WUH1 139 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 AK8Q96MA6 479 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 NOC4LQ9BVI4 516 aaKnown RBP16.58■□□□□ 0.24
PHTF1-202ENST00000369598 NOD2Q9HC29 1040 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 RWDD2AQ9UIY3 292 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 ZNF541Q9H0D2 1346 aa16.58■□□□□ 0.24
PHTF1-202ENST00000369598 USO1O60763 962 aaKnown RBP16.57■□□□□ 0.24
PHTF1-202ENST00000369598 TDP2O95551 362 aa16.57■□□□□ 0.24
PHTF1-202ENST00000369598 MAGEA1P43355 309 aa16.57■□□□□ 0.24
PHTF1-202ENST00000369598 IFNAR2P48551 515 aa16.57■□□□□ 0.24
PHTF1-202ENST00000369598 TRIM68Q6AZZ1 485 aa16.57■□□□□ 0.24
PHTF1-202ENST00000369598 SAMD1Q6SPF0 538 aaPredicted RBP16.57■□□□□ 0.24
PHTF1-202ENST00000369598 CCDC84Q86UT8 332 aaPredicted RBP16.57■□□□□ 0.24
PHTF1-202ENST00000369598 RASSF10A6NK89 507 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms