RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 ZNF215Q9UL58 517 aaPredicted RBP13.68□□□□□ -0.22
TUBE1-202ENST00000368662 FRMD3A2A2Y4 597 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 SEPT4O43236 478 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 DYNC1LI2O43237 492 aaPredicted RBP13.67□□□□□ -0.22
TUBE1-202ENST00000368662 ADCY6O43306 1168 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 DUSP11O75319 330 aaKnown RBP13.67□□□□□ -0.22
TUBE1-202ENST00000368662 STBD1O95210 358 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 MMP3P08254 477 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 PPP1R2P41236 205 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 CACNB2Q08289 660 aaPredicted RBP13.67□□□□□ -0.22
TUBE1-202ENST00000368662 GIT2Q14161 759 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 DPCR1Q3MIW9 517 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 EXOC8Q8IYI6 725 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 FAM200AQ8TCP9 573 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 REEP2Q9BRK0 252 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 RUSC1Q9BVN2 902 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 NIFKQ9BYG3 293 aaKnown RBP13.67□□□□□ -0.22
TUBE1-202ENST00000368662 DNAJC25Q9H1X3 360 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 CYP26B1Q9NR63 512 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 PANK4Q9NVE7 773 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 COL4A3BPQ9Y5P4 624 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 WDR81Q562E7 1941 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 GOLGA6L3A6NEY3 463 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 DGAT1O75907 488 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 LGALS2P05162 132 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 PRKAR2AP13861 404 aaKnown RBP13.67□□□□□ -0.22
TUBE1-202ENST00000368662 ELNP15502 786 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 GAP43P17677 238 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 ATP4AP20648 1035 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 ISM2Q6H9L7 571 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 GAS2L3Q86XJ1 694 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 ATP8B4Q8TF62 1192 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 SPC25Q9HBM1 224 aa13.67□□□□□ -0.22
TUBE1-202ENST00000368662 BMP6P22004 513 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 ZNF165P49910 485 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 STIM1Q13586 685 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 MAP3K21Q5TCX8 1036 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 MCPH1Q8NEM0 835 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 TRPV1Q8NER1 839 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 BPIFA3Q9BQP9 254 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 SEL1LQ9UBV2 794 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 TRIM17Q9Y577 477 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 HBP1O60381 514 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 USO1O60763 962 aaKnown RBP13.66□□□□□ -0.22
TUBE1-202ENST00000368662 RARBP10826 455 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 CNGA1P29973 690 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 RFC5P40937 340 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 NPEPPSP55786 919 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 EHHADHQ08426 723 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 COASYQ13057 564 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 PLA2G4FQ68DD2 849 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 TRMT1LQ7Z2T5 733 aaKnown RBP13.66□□□□□ -0.22
TUBE1-202ENST00000368662 DRC1Q96MC2 740 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 PARVGQ9HBI0 331 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 TSKSQ9UJT2 592 aa13.66□□□□□ -0.22
TUBE1-202ENST00000368662 NPHP3-ACAD11A0A0J9YXS1 232 aa13.65□□□□□ -0.22
TUBE1-202ENST00000368662 FAM13AO94988 1023 aa13.65□□□□□ -0.22
TUBE1-202ENST00000368662 ERCC5P28715 1186 aaPredicted RBP13.65□□□□□ -0.22
TUBE1-202ENST00000368662 RAD51AP2Q09MP3 1159 aa13.65□□□□□ -0.22
TUBE1-202ENST00000368662 PLCB4Q15147 1175 aa13.65□□□□□ -0.22
TUBE1-202ENST00000368662 COBLL1Q53SF7 1204 aa13.65□□□□□ -0.22
TUBE1-202ENST00000368662 HERC4Q5GLZ8 1057 aaPredicted RBP13.65□□□□□ -0.22
TUBE1-202ENST00000368662 C11orf57Q6ZUT1 292 aaPredicted RBP13.65□□□□□ -0.22
TUBE1-202ENST00000368662 TRIM50Q86XT4 487 aa13.65□□□□□ -0.22
TUBE1-202ENST00000368662 SLC7A3Q8WY07 619 aa13.65□□□□□ -0.22
TUBE1-202ENST00000368662 C16orf70Q9BSU1 422 aa13.65□□□□□ -0.22
TUBE1-202ENST00000368662 ATP6V0A4Q9HBG4 840 aa13.65□□□□□ -0.22
TUBE1-202ENST00000368662 H3BRB1 525 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 MSCO60682 206 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 KPNA6O60684 536 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 KIF20AO95235 890 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 PTGS1P23219 599 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 GRK4P32298 578 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 ZNF131P52739 623 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 GJA9P57773 515 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 CACNB1Q02641 598 aaPredicted RBP13.64□□□□□ -0.23
TUBE1-202ENST00000368662 MTERF2Q49AM1 385 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 FAM26FQ5R3K3 315 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 KIFAP3Q92845 792 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 JPH2Q9BR39 696 aaPredicted RBP13.64□□□□□ -0.23
TUBE1-202ENST00000368662 ZHX3Q9H4I2 956 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 TUT1Q9H6E5 874 aaKnown RBP13.64□□□□□ -0.23
TUBE1-202ENST00000368662 OLFML3Q9NRN5 406 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 LARSQ9P2J5 1176 aaKnown RBP13.64□□□□□ -0.23
TUBE1-202ENST00000368662 KCNG1Q9UIX4 513 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 TRPC6Q9Y210 931 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 FSD2A1L4K1 749 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 TMEM150BA6NC51 233 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 GAS2O43903 313 aaKnown RBP13.64□□□□□ -0.23
TUBE1-202ENST00000368662 ZEB2O60315 1214 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 HIP1RO75146 1068 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 MARK3P27448 753 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 POLGP54098 1239 aaPredicted RBP13.64□□□□□ -0.23
TUBE1-202ENST00000368662 NKX3-2P78367 333 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 TRIM32Q13049 653 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 TARBP2Q15633 366 aaKnown RBP13.64□□□□□ -0.23
TUBE1-202ENST00000368662 FSCN1Q16658 493 aaKnown RBP13.64□□□□□ -0.23
TUBE1-202ENST00000368662 UPF3AQ9H1J1 476 aaKnown RBP13.64□□□□□ -0.23
TUBE1-202ENST00000368662 C17orf75Q9HAS0 396 aa13.64□□□□□ -0.23
TUBE1-202ENST00000368662 BECN2A8MW95 431 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms