RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 PPT2Q9UMR5 302 aa9.93□□□□□ -0.82
TPM3-213ENST00000368545 MSRB2Q9Y3D2 182 aa9.93□□□□□ -0.82
TPM3-213ENST00000368545 PRKAB1Q9Y478 270 aa9.93□□□□□ -0.82
TPM3-213ENST00000368545 CYTH3O43739 400 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 CEBPZQ03701 1054 aaKnown RBP9.92□□□□□ -0.82
TPM3-213ENST00000368545 STK38Q15208 465 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 FAM169BQ8N8A8 192 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 BICD2Q8TD16 824 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 DCAF4Q8WV16 495 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 PMEPA1Q969W9 287 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 IRF2BPLQ9H1B7 796 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 RIOX1Q9H6W3 641 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 hCG_1642624A0A1W2PR95 340 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 GOLGA6L3A6NEY3 463 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 PPP1R12AO14974 1030 aaPredicted RBP9.92□□□□□ -0.82
TPM3-213ENST00000368545 SPTLC2O15270 562 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 USP2O75604 605 aaPredicted RBP9.92□□□□□ -0.82
TPM3-213ENST00000368545 EEF2P13639 858 aaKnown RBP9.92□□□□□ -0.82
TPM3-213ENST00000368545 ME1P48163 572 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 RNF144AP50876 292 aaPredicted RBP9.92□□□□□ -0.82
TPM3-213ENST00000368545 WDR4P57081 412 aaKnown RBP9.92□□□□□ -0.82
TPM3-213ENST00000368545 NLRP5P59047 1200 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 MRPS5P82675 430 aaKnown RBP9.92□□□□□ -0.82
TPM3-213ENST00000368545 TYRO3Q06418 890 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 ZNF543Q08ER8 600 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 PPIL2Q13356 520 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 ERO1BQ86YB8 467 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 GMCL1P1Q8NEA9 526 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 INSM2Q96T92 566 aaPredicted RBP9.92□□□□□ -0.82
TPM3-213ENST00000368545 PARK7Q99497 189 aaKnown RBP9.92□□□□□ -0.82
TPM3-213ENST00000368545 FTOQ9C0B1 505 aaKnown RBP eCLIP9.92□□□□□ -0.827e-6■■□□□ 12.9
TPM3-213ENST00000368545 TMEM39BQ9GZU3 492 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 BARHL2Q9NY43 387 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 CEP131Q9UPN4 1083 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 CLIC4Q9Y696 253 aa9.92□□□□□ -0.82
TPM3-213ENST00000368545 PPP6R2O75170 966 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 GDF11O95390 407 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 GH2P01242 217 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 CELA3AP09093 270 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 GOLGA8HP0CJ92 632 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 LIG3P49916 1009 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 SEPT2Q15019 361 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 SLC39A14Q15043 492 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 L1TD1Q5T7N2 865 aaKnown RBP9.91□□□□□ -0.82
TPM3-213ENST00000368545 ADALQ6DHV7 355 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 CLEC10AQ8IUN9 316 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 DAGLBQ8NCG7 672 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 PGBD1Q96JS3 809 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 DDX19AQ9NUU7 478 aaKnown RBP9.91□□□□□ -0.82
TPM3-213ENST00000368545 DDX56Q9NY93 547 aaKnown RBP9.91□□□□□ -0.82
TPM3-213ENST00000368545 THEGQ9P2T0 379 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 NOL7Q9UMY1 257 aaKnown RBP9.91□□□□□ -0.82
TPM3-213ENST00000368545 SLC45A1Q9Y2W3 748 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 MORC2Q9Y6X9 1032 aaPredicted RBP9.91□□□□□ -0.82
TPM3-213ENST00000368545 A0A1W2PQ27 194 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 A0A1W2PQ64 194 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 A0A1W2PQD8 194 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 ADCY3O60266 1144 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 BMP15O95972 392 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 SLC1A4P43007 532 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 CAMK2GQ13555 558 aaPredicted RBP9.91□□□□□ -0.82
TPM3-213ENST00000368545 CCDC96Q2M329 555 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 ARSJQ5FYB0 599 aaPredicted RBP9.91□□□□□ -0.82
TPM3-213ENST00000368545 TTC39BQ5VTQ0 682 aaPredicted RBP9.91□□□□□ -0.82
TPM3-213ENST00000368545 WWC2Q6AWC2 1192 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 DTHD1Q6ZMT9 781 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 SV2BQ7L1I2 683 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 ST7Q9NRC1 585 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 SALL4Q9UJQ4 1053 aa9.91□□□□□ -0.82
TPM3-213ENST00000368545 DOCK1Q14185 1865 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 FRMPD2Q68DX3 1309 aaPredicted RBP9.9□□□□□ -0.82
TPM3-213ENST00000368545 TMEM238LA0A1B0GVL6 79 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 FSD2A1L4K1 749 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 STXBP3O00186 592 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 SLURP2P0DP57 97 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 DEKP35659 375 aaKnown RBP9.9□□□□□ -0.82
TPM3-213ENST00000368545 TRAPPC10P48553 1259 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 NPY5RQ15761 445 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 SLC35G1Q2M3R5 365 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 SNAP47Q5SQN1 464 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 LRSAM1Q6UWE0 723 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 CCDC73Q6ZRK6 1079 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 RASGRP2Q7LDG7 609 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 HEATR3Q7Z4Q2 680 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 BLIDQ8IZY5 108 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 TNFRSF25Q93038 417 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 NKD1Q969G9 470 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 GMCL1Q96IK5 515 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 PAWRQ96IZ0 340 aaKnown RBP9.9□□□□□ -0.82
TPM3-213ENST00000368545 CCDC113Q9H0I3 377 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 SH2D4AQ9H788 454 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 PCDHA4Q9UN74 947 aa9.9□□□□□ -0.82
TPM3-213ENST00000368545 ESYT2A0FGR8 921 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 TIMP2P16035 220 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 EPB42P16452 691 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 GNA11P29992 359 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 GYS2P54840 703 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 NAPAP54920 295 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 GRIN2CQ14957 1233 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 CCDC181Q5TID7 509 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms