RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 CNKSR3Q6P9H4 555 aa11.11□□□□□ -0.63
CD48-202ENST00000368046 MTHFD1LQ6UB35 978 aa11.11□□□□□ -0.63
CD48-202ENST00000368046 TMEM92Q6UXU6 159 aa11.11□□□□□ -0.63
CD48-202ENST00000368046 RUFY4Q6ZNE9 571 aa11.11□□□□□ -0.63
CD48-202ENST00000368046 MIER3Q7Z3K6 550 aa11.11□□□□□ -0.63
CD48-202ENST00000368046 DBF4BQ8NFT6 615 aa11.11□□□□□ -0.63
CD48-202ENST00000368046 DNAJB3Q8WWF6 145 aa11.11□□□□□ -0.63
CD48-202ENST00000368046 HAS1Q92839 578 aa11.11□□□□□ -0.63
CD48-202ENST00000368046 FOXP1Q9H334 677 aaPredicted RBP11.11□□□□□ -0.63
CD48-202ENST00000368046 SEMA6BQ9H3T3 888 aa11.11□□□□□ -0.63
CD48-202ENST00000368046 KIF3AQ9Y496 699 aa11.11□□□□□ -0.63
CD48-202ENST00000368046 LAMA3Q16787 3333 aa11.11□□□□□ -0.63
CD48-202ENST00000368046 CHMP2AO43633 222 aa11.1□□□□□ -0.63
CD48-202ENST00000368046 EFCAB14O75071 495 aa11.1□□□□□ -0.63
CD48-202ENST00000368046 CD2BP2O95400 341 aaKnown RBP11.1□□□□□ -0.63
CD48-202ENST00000368046 CHRNA1P02708 482 aa11.1□□□□□ -0.63
CD48-202ENST00000368046 FOSBP53539 338 aa11.1□□□□□ -0.63
CD48-202ENST00000368046 PLEKHG4Q58EX7 1191 aa11.1□□□□□ -0.63
CD48-202ENST00000368046 IER5Q5VY09 327 aa11.1□□□□□ -0.63
CD48-202ENST00000368046 SLFN12Q8IYM2 578 aa11.1□□□□□ -0.63
CD48-202ENST00000368046 TRAPPC12Q8WVT3 735 aa11.1□□□□□ -0.63
CD48-202ENST00000368046 MTMR10Q9NXD2 777 aa11.1□□□□□ -0.63
CD48-202ENST00000368046 MSRAQ9UJ68 235 aa11.1□□□□□ -0.63
CD48-202ENST00000368046 PCDHA12Q9UN75 941 aa11.1□□□□□ -0.63
CD48-202ENST00000368046 CEP131Q9UPN4 1083 aa11.1□□□□□ -0.63
CD48-202ENST00000368046 SQORQ9Y6N5 450 aa11.1□□□□□ -0.63
CD48-202ENST00000368046 COL1A2P08123 1366 aa11.1□□□□□ -0.63
CD48-202ENST00000368046 SZT2Q5T011 3432 aa11.09□□□□□ -0.63
CD48-202ENST00000368046 TMEM265A0A087WTH1 108 aa11.09□□□□□ -0.63
CD48-202ENST00000368046 MAGEB2O15479 319 aa11.09□□□□□ -0.63
CD48-202ENST00000368046 ZNF862O60290 1169 aa11.09□□□□□ -0.63
CD48-202ENST00000368046 CTSHP09668 335 aa11.09□□□□□ -0.63
CD48-202ENST00000368046 ATP2A2P16615 1042 aaKnown RBP11.09□□□□□ -0.63
CD48-202ENST00000368046 DNAJB2P25686 324 aa11.09□□□□□ -0.63
CD48-202ENST00000368046 LSM11P83369 360 aaKnown RBP eCLIP11.09□□□□□ -0.63
CD48-202ENST00000368046 MGAT3Q09327 533 aa11.09□□□□□ -0.63
CD48-202ENST00000368046 PPP2R5CQ13362 524 aa11.09□□□□□ -0.63
CD48-202ENST00000368046 GNL2Q13823 731 aaKnown RBP11.09□□□□□ -0.63
CD48-202ENST00000368046 RAB30Q15771 203 aa11.09□□□□□ -0.63
CD48-202ENST00000368046 XKR3Q5GH77 459 aa11.09□□□□□ -0.63
CD48-202ENST00000368046 ZNF697Q5TEC3 545 aa11.09□□□□□ -0.63
CD48-202ENST00000368046 Q7L0L9 218 aa11.09□□□□□ -0.63
CD48-202ENST00000368046 TRMT1LQ7Z2T5 733 aaKnown RBP11.09□□□□□ -0.63
CD48-202ENST00000368046 KIAA0319LQ8IZA0 1049 aa11.09□□□□□ -0.63
CD48-202ENST00000368046 SEPT8Q92599 483 aa11.09□□□□□ -0.63
CD48-202ENST00000368046 ZBTB10Q96DT7 871 aa11.09□□□□□ -0.63
CD48-202ENST00000368046 FAM167AQ96KS9 214 aa11.09□□□□□ -0.63
CD48-202ENST00000368046 SLC9A7Q96T83 725 aa11.09□□□□□ -0.63
CD48-202ENST00000368046 PBX4Q9BYU1 374 aa11.09□□□□□ -0.63
CD48-202ENST00000368046 OSBPL7Q9BZF2 842 aa11.09□□□□□ -0.63
CD48-202ENST00000368046 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.08□□□□□ -0.64
CD48-202ENST00000368046 ZBTB42B2RXF5 422 aa11.08□□□□□ -0.64
CD48-202ENST00000368046 KIF28PB7ZC32 967 aa11.08□□□□□ -0.64
CD48-202ENST00000368046 DKC1O60832 514 aaKnown RBP eCLIP11.08□□□□□ -0.64
CD48-202ENST00000368046 OATP04181 439 aa11.08□□□□□ -0.64
CD48-202ENST00000368046 P4HBP07237 508 aaKnown RBP11.08□□□□□ -0.64
CD48-202ENST00000368046 U2AF2P26368 475 aaKnown RBP eCLIP11.08□□□□□ -0.64
CD48-202ENST00000368046 PBX2P40425 430 aa11.08□□□□□ -0.64
CD48-202ENST00000368046 KCNJ6P48051 423 aa11.08□□□□□ -0.64
CD48-202ENST00000368046 PSMC5P62195 406 aa11.08□□□□□ -0.64
CD48-202ENST00000368046 MRPS6P82932 125 aaKnown RBP11.08□□□□□ -0.64
CD48-202ENST00000368046 EPHA7Q15375 998 aa11.08□□□□□ -0.64
CD48-202ENST00000368046 TCTN1Q2MV58 587 aa11.08□□□□□ -0.64
CD48-202ENST00000368046 NOSTRINQ8IVI9 506 aa11.08□□□□□ -0.64
CD48-202ENST00000368046 USP38Q8NB14 1042 aa11.08□□□□□ -0.64
CD48-202ENST00000368046 APBB2Q92870 758 aa11.08□□□□□ -0.64
CD48-202ENST00000368046 TIFAQ96CG3 184 aa11.08□□□□□ -0.64
CD48-202ENST00000368046 MTMR9Q96QG7 549 aa11.08□□□□□ -0.64
CD48-202ENST00000368046 NIFKQ9BYG3 293 aaKnown RBP11.08□□□□□ -0.64
CD48-202ENST00000368046 CELF4Q9BZC1 486 aaKnown RBP11.08□□□□□ -0.64
CD48-202ENST00000368046 FAM49AQ9H0Q0 323 aaPredicted RBP11.08□□□□□ -0.64
CD48-202ENST00000368046 SLC28A3Q9HAS3 691 aa11.08□□□□□ -0.64
CD48-202ENST00000368046 RTN4Q9NQC3 1192 aaKnown RBP11.08□□□□□ -0.64
CD48-202ENST00000368046 VAV3Q9UKW4 847 aa11.08□□□□□ -0.64
CD48-202ENST00000368046 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.08□□□□□ -0.64
CD48-202ENST00000368046 PCDHA11Q9Y5I1 949 aa11.08□□□□□ -0.64
CD48-202ENST00000368046 IGSF9BQ9UPX0 1349 aa11.08□□□□□ -0.64
CD48-202ENST00000368046 DOCK5Q9H7D0 1870 aa11.07□□□□□ -0.64
CD48-202ENST00000368046 DDX11L8A8MPP1 907 aa11.07□□□□□ -0.64
CD48-202ENST00000368046 M0QZ92 97 aa11.07□□□□□ -0.64
CD48-202ENST00000368046 EML1O00423 815 aa11.07□□□□□ -0.64
CD48-202ENST00000368046 STBD1O95210 358 aa11.07□□□□□ -0.64
CD48-202ENST00000368046 ATP2B1P20020 1258 aa11.07□□□□□ -0.64
CD48-202ENST00000368046 TMOD1P28289 359 aa11.07□□□□□ -0.64
CD48-202ENST00000368046 GJB2P29033 226 aa11.07□□□□□ -0.64
CD48-202ENST00000368046 TXKP42681 527 aa11.07□□□□□ -0.64
CD48-202ENST00000368046 QARSP47897 775 aaKnown RBP11.07□□□□□ -0.64
CD48-202ENST00000368046 TRAPPC10P48553 1259 aa11.07□□□□□ -0.64
CD48-202ENST00000368046 WDR5P61964 334 aaKnown RBP11.07□□□□□ -0.64
CD48-202ENST00000368046 ORC2Q13416 577 aaPredicted RBP11.07□□□□□ -0.64
CD48-202ENST00000368046 TARBP2Q15633 366 aaKnown RBP11.07□□□□□ -0.64
CD48-202ENST00000368046 CALCRLQ16602 461 aa11.07□□□□□ -0.64
CD48-202ENST00000368046 UGCGQ16739 394 aa11.07□□□□□ -0.64
CD48-202ENST00000368046 ARSIQ5FYB1 569 aa11.07□□□□□ -0.64
CD48-202ENST00000368046 FBXO47Q5MNV8 452 aa11.07□□□□□ -0.64
CD48-202ENST00000368046 EFCAB12Q6NXP0 572 aa11.07□□□□□ -0.64
CD48-202ENST00000368046 FAM43BQ6ZT52 329 aaPredicted RBP11.07□□□□□ -0.64
CD48-202ENST00000368046 HERC6Q8IVU3 1022 aa11.07□□□□□ -0.64
CD48-202ENST00000368046 FAM161BQ96MY7 647 aa11.07□□□□□ -0.64
CD48-202ENST00000368046 IFIH1Q9BYX4 1025 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms