RNA–Protein interactions for RNA: ENST00000367881.9

TMCO1-201, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-201ENST00000367881 CTDP1Q9Y5B0 961 aaPredicted RBP11.82□□□□□ -0.52
TMCO1-201ENST00000367881 PCDHA13Q9Y5I0 950 aa11.82□□□□□ -0.52
TMCO1-201ENST00000367881 LCTP09848 1927 aa11.81□□□□□ -0.52
TMCO1-201ENST00000367881 SPDYE16A6NNV3 312 aaPredicted RBP11.81□□□□□ -0.52
TMCO1-201ENST00000367881 PP2D1A8MPX8 630 aa11.81□□□□□ -0.52
TMCO1-201ENST00000367881 PDE2AO00408 941 aaPredicted RBP11.81□□□□□ -0.52
TMCO1-201ENST00000367881 PAFAH1B1P43034 410 aa11.81□□□□□ -0.52
TMCO1-201ENST00000367881 KIF11P52732 1056 aa11.81□□□□□ -0.52
TMCO1-201ENST00000367881 VWA3BQ502W6 1294 aa11.81□□□□□ -0.52
TMCO1-201ENST00000367881 CCDC181Q5TID7 509 aa11.81□□□□□ -0.52
TMCO1-201ENST00000367881 FASTKD5Q7L8L6 764 aaKnown RBP11.81□□□□□ -0.52
TMCO1-201ENST00000367881 REPS2Q8NFH8 660 aa11.81□□□□□ -0.52
TMCO1-201ENST00000367881 DEF6Q9H4E7 631 aa11.81□□□□□ -0.52
TMCO1-201ENST00000367881 HOXC10Q9NYD6 342 aa11.81□□□□□ -0.52
TMCO1-201ENST00000367881 LRWD1Q9UFC0 647 aa11.81□□□□□ -0.52
TMCO1-201ENST00000367881 AGTPBP1Q9UPW5 1226 aa11.81□□□□□ -0.52
TMCO1-201ENST00000367881 MRPL11Q9Y3B7 192 aaKnown RBP11.81□□□□□ -0.52
TMCO1-201ENST00000367881 ATXN2Q99700 1313 aaKnown RBP11.81□□□□□ -0.52
TMCO1-201ENST00000367881 SSU72P8A0A1W2PR75 194 aa11.8□□□□□ -0.52
TMCO1-201ENST00000367881 AGPSO00116 658 aa11.8□□□□□ -0.52
TMCO1-201ENST00000367881 MEIS2O14770 477 aa11.8□□□□□ -0.52
TMCO1-201ENST00000367881 HUNKP57058 714 aa11.8□□□□□ -0.52
TMCO1-201ENST00000367881 C2orf54Q08AI8 447 aa11.8□□□□□ -0.52
TMCO1-201ENST00000367881 USP17L6PQ6QN14 398 aa11.8□□□□□ -0.52
TMCO1-201ENST00000367881 NEK8Q86SG6 692 aa11.8□□□□□ -0.52
TMCO1-201ENST00000367881 GUF1Q8N442 669 aaKnown RBP11.8□□□□□ -0.52
TMCO1-201ENST00000367881 SPATA4Q8NEY3 305 aa11.8□□□□□ -0.52
TMCO1-201ENST00000367881 OSBPL9Q96SU4 736 aa11.8□□□□□ -0.52
TMCO1-201ENST00000367881 RUFY1Q96T51 708 aa11.8□□□□□ -0.52
TMCO1-201ENST00000367881 NDST4Q9H3R1 872 aa11.8□□□□□ -0.52
TMCO1-201ENST00000367881 STIM2Q9P246 746 aa11.8□□□□□ -0.52
TMCO1-201ENST00000367881 SIK3Q9Y2K2 1263 aa11.8□□□□□ -0.52
TMCO1-201ENST00000367881 A0A087WUV0 522 aaPredicted RBP11.8□□□□□ -0.52
TMCO1-201ENST00000367881 STK4Q13043 487 aa11.8□□□□□ -0.52
TMCO1-201ENST00000367881 MKRN3Q13064 507 aaKnown RBP11.8□□□□□ -0.52
TMCO1-201ENST00000367881 PSMD2Q13200 908 aa11.8□□□□□ -0.52
TMCO1-201ENST00000367881 UNC13DQ70J99 1090 aa11.8□□□□□ -0.52
TMCO1-201ENST00000367881 SV2BQ7L1I2 683 aa11.8□□□□□ -0.52
TMCO1-201ENST00000367881 SMC1BQ8NDV3 1235 aa11.8□□□□□ -0.52
TMCO1-201ENST00000367881 SYN2Q92777 582 aaPredicted RBP11.8□□□□□ -0.52
TMCO1-201ENST00000367881 RAB34Q9BZG1 259 aa11.8□□□□□ -0.52
TMCO1-201ENST00000367881 ZNF185O15231 689 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 AKR1B10O60218 316 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 HSF2BPO75031 334 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 MYBL2P10244 700 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 ALAS1P13196 640 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 IRX3P78415 501 aaPredicted RBP11.79□□□□□ -0.52
TMCO1-201ENST00000367881 CYP27A1Q02318 531 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 SPRYD7Q5W111 196 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 GPAT2Q6NUI2 795 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 FOXR1Q6PIV2 292 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 SND1Q7KZF4 910 aaKnown RBP eCLIP11.79□□□□□ -0.522e-9■■■■□ 21.3
TMCO1-201ENST00000367881 SPATS2Q86XZ4 545 aaKnown RBP11.79□□□□□ -0.52
TMCO1-201ENST00000367881 TBCKQ8TEA7 893 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 MS4A4AQ96JQ5 239 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 CAPS2Q9BXY5 557 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 ASCC2Q9H1I8 757 aaPredicted RBP11.79□□□□□ -0.52
TMCO1-201ENST00000367881 ARHGAP20Q9P2F6 1191 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 PNMA2Q9UL42 364 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 KIAA1217Q5T5P2 1943 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 RBAK-RBAKDNI3L0D1 243 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 PIK3CDO00329 1044 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 EBAG9O00559 213 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 ZNF263O14978 683 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 HOXA13P31271 388 aaPredicted RBP11.79□□□□□ -0.52
TMCO1-201ENST00000367881 GTF2A2P52657 109 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 OAZ1P54368 228 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 SKOR1P84550 965 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 TMEM132BQ14DG7 1078 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.79□□□□□ -0.52
TMCO1-201ENST00000367881 TBC1D5Q92609 795 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 NOX5Q96PH1 765 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 P2RX7Q99572 595 aaKnown RBP11.79□□□□□ -0.52
TMCO1-201ENST00000367881 TSG101Q99816 390 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 ZNF214Q9UL59 606 aaPredicted RBP11.79□□□□□ -0.52
TMCO1-201ENST00000367881 CAPN6Q9Y6Q1 641 aa11.79□□□□□ -0.52
TMCO1-201ENST00000367881 GRID2IPA4D2P6 1211 aa11.78□□□□□ -0.52
TMCO1-201ENST00000367881 ATP2A1O14983 1001 aa11.78□□□□□ -0.52
TMCO1-201ENST00000367881 EIF3HO15372 352 aaKnown RBP eCLIP11.78□□□□□ -0.52
TMCO1-201ENST00000367881 CCNT1O60563 726 aaKnown RBP11.78□□□□□ -0.52
TMCO1-201ENST00000367881 CFBP00751 764 aa11.78□□□□□ -0.52
TMCO1-201ENST00000367881 ZBTB48P10074 688 aaPredicted RBP11.78□□□□□ -0.52
TMCO1-201ENST00000367881 CETPP11597 493 aa11.78□□□□□ -0.52
TMCO1-201ENST00000367881 NOP2P46087 812 aaKnown RBP11.78□□□□□ -0.52
TMCO1-201ENST00000367881 KLK7P49862 253 aa11.78□□□□□ -0.52
TMCO1-201ENST00000367881 FXR2P51116 673 aaKnown RBP eCLIP11.78□□□□□ -0.523e-10■■■■■ 40.7
TMCO1-201ENST00000367881 IRAK1P51617 712 aa11.78□□□□□ -0.52
TMCO1-201ENST00000367881 PABPC4Q13310 644 aaKnown RBP eCLIP11.78□□□□□ -0.525e-9■■■■□ 24.5
TMCO1-201ENST00000367881 AP3B2Q13367 1082 aa11.78□□□□□ -0.52
TMCO1-201ENST00000367881 TMEM266Q2M3C6 531 aa11.78□□□□□ -0.52
TMCO1-201ENST00000367881 CFAP221Q4G0U5 840 aa11.78□□□□□ -0.52
TMCO1-201ENST00000367881 SNRNP48Q6IEG0 339 aaKnown RBP11.78□□□□□ -0.52
TMCO1-201ENST00000367881 C8orf74Q6P047 294 aa11.78□□□□□ -0.52
TMCO1-201ENST00000367881 POTEEQ6S8J3 1075 aa11.78□□□□□ -0.52
TMCO1-201ENST00000367881 TADA2BQ86TJ2 420 aa11.78□□□□□ -0.52
TMCO1-201ENST00000367881 KIAA0895Q8NCT3 520 aa11.78□□□□□ -0.52
TMCO1-201ENST00000367881 CLEC4DQ8WXI8 215 aa11.78□□□□□ -0.52
TMCO1-201ENST00000367881 ANO3Q9BYT9 981 aa11.78□□□□□ -0.52
TMCO1-201ENST00000367881 HOMER2Q9NSB8 354 aa11.78□□□□□ -0.52
TMCO1-201ENST00000367881 TFR2Q9UP52 801 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms