RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 BHMG1C9JSJ3 638 aaPredicted RBP9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 GNAT1P11488 350 aa9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 SCG2P13521 617 aa9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 AOC1P19801 751 aa9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 IBSPP21815 317 aaPredicted RBP9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 MRPS6P82932 125 aaKnown RBP9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 SP4Q02446 784 aa9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 TMEM62Q0P6H9 643 aa9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 TMEM266Q2M3C6 531 aa9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 C12orf76Q8N812 135 aaPredicted RBP9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 DTWD2Q8NBA8 298 aa9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 COLGALT1Q8NBJ5 622 aa9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 PNMA1Q8ND90 353 aa9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 RASGRP4Q8TDF6 673 aa9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 FAM227BQ96M60 508 aa9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 CDCA3Q99618 268 aaPredicted RBP9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 CWH43Q9H720 699 aa9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 ERVK-5Q9HDB9 667 aa9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 TMEM260Q9NX78 707 aa9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 PADI3Q9ULW8 664 aa9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 DDX19BQ9UMR2 479 aa9.86□□□□□ -0.83
HMGB1P39-201ENST00000366304 NRCAMQ92823 1304 aa9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 DOCK5Q9H7D0 1870 aa9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 A0A0D9SFI3 127 aa9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 NOP56O00567 594 aaKnown RBP9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 LMNAP02545 664 aaKnown RBP9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 MARK3P27448 753 aa9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 CCND2P30279 289 aa9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 PBX3P40426 434 aa9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 UBE3AQ05086 875 aa9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 PUM1Q14671 1186 aaKnown RBP eCLIP9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 GRIK4Q16099 956 aa9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 C20orf194Q5TEA3 1177 aa9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 ZNF589Q86UQ0 364 aaPredicted RBP9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 KCNG4Q8TDN1 519 aa9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 KCTD12Q96CX2 325 aaKnown RBP9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 MTMR8Q96EF0 704 aa9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 INPP4AQ96PE3 977 aaPredicted RBP9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 FAM49AQ9H0Q0 323 aaPredicted RBP9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 ADAM7Q9H2U9 754 aa9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 MFSD1Q9H3U5 465 aa9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 DCTPP1Q9H773 170 aa9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 TYW1Q9NV66 732 aaKnown RBP9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 RTEL1Q9NZ71 1219 aa9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 NR2E1Q9Y466 385 aa9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 MYO10Q9HD67 2058 aa9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 ATRXP46100 2492 aa9.85□□□□□ -0.83
HMGB1P39-201ENST00000366304 FRMPD4Q14CM0 1322 aa9.84□□□□□ -0.83
HMGB1P39-201ENST00000366304 GSTTP1A0A1W2PQM5 241 aa9.84□□□□□ -0.83
HMGB1P39-201ENST00000366304 TBKBP1A7MCY6 615 aa9.84□□□□□ -0.83
HMGB1P39-201ENST00000366304 ATP9AO75110 1047 aa9.84□□□□□ -0.83
HMGB1P39-201ENST00000366304 HOXB8P17481 243 aaPredicted RBP9.84□□□□□ -0.83
HMGB1P39-201ENST00000366304 PPFIA1Q13136 1202 aa9.84□□□□□ -0.83
HMGB1P39-201ENST00000366304 RSPO4Q2I0M5 234 aaPredicted RBP9.84□□□□□ -0.83
HMGB1P39-201ENST00000366304 TAF2Q6P1X5 1199 aa9.84□□□□□ -0.83
HMGB1P39-201ENST00000366304 LRRC55Q6ZSA7 311 aa9.84□□□□□ -0.83
HMGB1P39-201ENST00000366304 FCHSD1Q86WN1 690 aa9.84□□□□□ -0.83
HMGB1P39-201ENST00000366304 ZDHHC14Q8IZN3 488 aa9.84□□□□□ -0.83
HMGB1P39-201ENST00000366304 CYP2W1Q8TAV3 490 aa9.84□□□□□ -0.83
HMGB1P39-201ENST00000366304 TRAPPC12Q8WVT3 735 aa9.84□□□□□ -0.83
HMGB1P39-201ENST00000366304 TCF25Q9BQ70 676 aa9.84□□□□□ -0.83
HMGB1P39-201ENST00000366304 CDHR5Q9HBB8 845 aa9.84□□□□□ -0.83
HMGB1P39-201ENST00000366304 TUBE1Q9UJT0 475 aa9.84□□□□□ -0.83
HMGB1P39-201ENST00000366304 PCDHB12Q9Y5F1 795 aa9.84□□□□□ -0.83
HMGB1P39-201ENST00000366304 IGSF9BQ9UPX0 1349 aa9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 DHX16O60231 1041 aaKnown RBP9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 CLASP2O75122 1294 aaKnown RBP9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 FGFR1P11362 822 aa9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 TCF7P36402 384 aaPredicted RBP9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 SARSP49591 514 aaKnown RBP9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 IGBP1P78318 339 aa9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 ASPRV1Q53RT3 343 aa9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 RARS2Q5T160 578 aaKnown RBP9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 DGKHQ86XP1 1220 aa9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 THNSL1Q8IYQ7 743 aa9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 SIX5Q8N196 739 aa9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 ENAHQ8N8S7 591 aaPredicted RBP9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 TMEM40Q8WWA1 233 aa9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 RIN2Q8WYP3 895 aaPredicted RBP9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 GPATCH3Q96I76 525 aa9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 PCYT2Q99447 389 aa9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 AMNQ9BXJ7 453 aa9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 RNF19AQ9NV58 838 aa9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 KIAA1468Q9P260 1216 aa9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 RABGEF1Q9UJ41 708 aa9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 ZNF215Q9UL58 517 aaPredicted RBP9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 PCDHA1Q9Y5I3 950 aa9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 HCFC2Q9Y5Z7 792 aa9.83□□□□□ -0.84
HMGB1P39-201ENST00000366304 TTC41PQ6P2S7 1318 aa9.82□□□□□ -0.84
HMGB1P39-201ENST00000366304 SALL3Q9BXA9 1300 aa9.82□□□□□ -0.84
HMGB1P39-201ENST00000366304 KRBA1A5PL33 1030 aa9.82□□□□□ -0.84
HMGB1P39-201ENST00000366304 C2orf71A6NGG8 1288 aa9.82□□□□□ -0.84
HMGB1P39-201ENST00000366304 TRIM6-TRIM34B2RNG4 842 aa9.82□□□□□ -0.84
HMGB1P39-201ENST00000366304 C9IYK1 514 aa9.82□□□□□ -0.84
HMGB1P39-201ENST00000366304 NARSO43776 548 aaKnown RBP9.82□□□□□ -0.84
HMGB1P39-201ENST00000366304 STAG3L1P0CL83 205 aa9.82□□□□□ -0.84
HMGB1P39-201ENST00000366304 INSRRP14616 1297 aa9.82□□□□□ -0.84
HMGB1P39-201ENST00000366304 PLCB3Q01970 1234 aa9.82□□□□□ -0.84
HMGB1P39-201ENST00000366304 NEDD9Q14511 834 aa9.82□□□□□ -0.84
HMGB1P39-201ENST00000366304 SPOUT1Q5T280 376 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms