RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 HLFQ16534 295 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 BRINP3Q76B58 766 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 EEPD1Q7L9B9 569 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 MB21D1Q8N884 522 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 DCAF4Q8WV16 495 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 DYDC2Q96IM9 177 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 KIF9Q9HAQ2 790 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 CASP1P29466 404 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 HOXA13P31271 388 aaPredicted RBP13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 RYBPQ8N488 228 aaPredicted RBP13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 C7orf31Q8N865 590 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 PBKQ96KB5 322 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 SLC4A7Q9Y6M7 1214 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 MORC2Q9Y6X9 1032 aaPredicted RBP13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 hCG_2014768A0A024R1R8 64 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 GSTA4O15217 222 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 KRT80Q6KB66 452 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 SH3RF3Q8TEJ3 882 aaPredicted RBP13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 ZMYND12Q9H0C1 365 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 PLAAQ9Y263 795 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 SPATA31A3Q5VYP0 1347 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 PCYT1AP49585 367 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 KRT31Q15323 416 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 DNAJC24Q6P3W2 148 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 EIF2AQ9BY44 585 aaKnown RBP13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 ZNF341Q9BYN7 854 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 EXOC1LA0A1B0GW35 172 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 ALCAMQ13740 583 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 CC2D1AQ6P1N0 951 aaPredicted RBP13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 ATP8B3O60423 1300 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 PLEKHA8P1O95397 391 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 IRX1P78414 480 aaPredicted RBP13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 MYO1EQ12965 1108 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 DGKHQ86XP1 1220 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 TRIML2Q8N7C3 387 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 GINM1Q9NU53 330 aa13.12□□□□□ -0.31
CCDC144A-204ENST00000360524 PTCH1Q13635 1447 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 ADGRL3Q9HAR2 1447 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 ZNF233A6NK53 670 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 RASGRF2O14827 1237 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 CCNE1P24864 410 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 STRBPQ96SI9 672 aaKnown RBP13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 CYTH2Q99418 400 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 TUBB6Q9BUF5 446 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 HMGB1P1B2RPK0 211 aaPredicted RBP13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 EIF2AK2P19525 551 aaKnown RBP13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 SURF1Q15526 300 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 CDO1Q16878 200 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 OR6B2Q6IFH4 312 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 PDXDC2PQ6P474 469 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 EPS15L1Q9UBC2 864 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 EIF4E1BA6NMX2 242 aaKnown RBP13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 NECTIN1Q15223 517 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 ARL6IP4Q66PJ3 421 aaKnown RBP13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 CNPY4Q8N129 248 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 MRPL47Q9HD33 250 aaKnown RBP13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 TRIM49BA6NDI0 452 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 H0Y3Z8 333 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 NVLO15381 856 aaKnown RBP13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 CRKP46108 304 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 ARPP19P56211 112 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 SPOPLQ6IQ16 392 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 RNF207Q6ZRF8 634 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 PARP9Q8IXQ6 854 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 ENOX1Q8TC92 643 aaKnown RBP13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 PANX2Q96RD6 677 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 SLC12A6Q9UHW9 1150 aa13.11□□□□□ -0.31
CCDC144A-204ENST00000360524 ABCC3O15438 1527 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 ARHGEF37A1IGU5 675 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 C21orf2O43822 256 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 HNRNPCP07910 306 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 RSBN1LQ6PCB5 846 aaPredicted RBP13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 HIPK4Q8NE63 616 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 KCNV2Q8TDN2 545 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 EXT2Q93063 718 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 GOLPH3LQ9H4A5 285 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 ZBBXA8MT70 800 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 PPP1R12AO14974 1030 aaPredicted RBP13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 AP3B2Q13367 1082 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 THOC5Q13769 683 aaKnown RBP13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 BBS9Q3SYG4 887 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 SIRT2Q8IXJ6 389 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 SLC10A4Q96EP9 437 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 CCDC138Q96M89 665 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 ZCCHC17Q9NP64 241 aaKnown RBP13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 CYP27B1O15528 508 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 PALMO75781 387 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 MXI1P50539 228 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 ZBED6P86452 979 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 MKRN3Q13064 507 aaKnown RBP13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 IQCB1Q15051 598 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 FMO2Q99518 471 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 NDST4Q9H3R1 872 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 PNMA3Q9UL41 463 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 GDAQ9Y2T3 454 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 LMNAP02545 664 aaKnown RBP13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 ARHGAP31Q2M1Z3 1444 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 NBPF10Q6P3W6 841 aaKnown RBP13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 TMED8Q6PL24 325 aaPredicted RBP13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 ELAC2Q9BQ52 826 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms