RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 SPATA31C1P0DKV0 1188 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 ARP10275 920 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 ITGB5P18084 799 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 SCP2P22307 547 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 QARSP47897 775 aaKnown RBP11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 FXR1P51114 621 aaKnown RBP eCLIP11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 SLC12A3P55017 1021 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 ALCAMQ13740 583 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 KCNJ12Q14500 433 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 ZNF792Q3KQV3 632 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 OLFML2BQ68BL8 750 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 SPECC1LQ69YQ0 1117 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 POTEGQ6S5H5 508 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 SLC30A10Q6XR72 485 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 TMC6Q7Z403 805 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 FILIP1Q7Z7B0 1213 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 PPFIBP1Q86W92 1011 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 CYP2W1Q8TAV3 490 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 ATP6V0A1Q93050 837 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 MAML3Q96JK9 1138 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 INPP4AQ96PE3 977 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 SENP7Q9BQF6 1050 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 HTATIP2Q9BUP3 242 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 BHMT2Q9H2M3 363 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 A1CFQ9NQ94 594 aaKnown RBP11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 COL20A1Q9P218 1284 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 LIMA1Q9UHB6 759 aaKnown RBP11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 DDX20Q9UHI6 824 aaKnown RBP11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 DBR1Q9UK59 544 aaKnown RBP11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 UBE4BO95155 1302 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 A0A0G2JMZ2 1700 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 COL11A1P12107 1806 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 A0A1B0GTH6 734 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 LRRC10BA6NIK2 292 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 N4BP3O15049 544 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 AP5Z1O43299 807 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 EVI5O60447 810 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 SLITRK3O94933 977 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 FAM13AO94988 1023 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 PSAPP07602 524 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 TGFB3P10600 412 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 FCER1AP12319 257 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 CD44P16070 742 aaKnown RBP11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 CYP11B2P19099 503 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 RPL13P26373 211 aaKnown RBP11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 CNGA1P29973 690 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 STX17P56962 302 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 PSMC5P62195 406 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 CYP4A11Q02928 519 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 PPP2R3AQ06190 1150 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 COASYQ13057 564 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 HSP90AA2PQ14568 343 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 LRRC26Q2I0M4 334 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 TSR1Q2NL82 804 aaKnown RBP11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 TCP11X2Q5H9J9 407 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 FKBP15Q5T1M5 1219 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 CENPPQ6IPU0 288 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 VSTM4Q8IW00 320 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 SMYD4Q8IYR2 804 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 ABRAQ8N0Z2 381 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 ANKLE1Q8NAG6 615 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 GOLGA5Q8TBA6 731 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 DYDC2Q96IM9 177 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 FGD4Q96M96 766 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 MMP19Q99542 508 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 LXNQ9BS40 222 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 UNC45AQ9H3U1 944 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 ZHX3Q9H4I2 956 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 C11orf49Q9H6J7 331 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 ANKEF1Q9NU02 776 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 ZMYND8Q9ULU4 1186 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 GDAQ9Y2T3 454 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 PCDHA10Q9Y5I2 948 aa11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRAPPC4-201ENST00000359005 FRMD3A2A2Y4 597 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 CALUO43852 315 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 ATP1A3P13637 1013 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 CLCN1P35523 988 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 DNM2P50570 870 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 MRPS9P82933 396 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 FKBP3Q00688 224 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 STK4Q13043 487 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 NEDD9Q14511 834 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 NR1I3Q14994 352 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 MIS18BP1Q6P0N0 1132 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 B3GNT9Q6UX72 402 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 CNGA4Q8IV77 575 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 LRRC8AQ8IWT6 810 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 C4orf19Q8IY42 314 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 EXOC8Q8IYI6 725 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 C7orf61Q8IZ16 206 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 LENG1Q96BZ8 264 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 DNAJC19Q96DA6 116 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 CCDC51Q96ER9 411 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 DRC1Q96MC2 740 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 CEP63Q96MT8 703 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 NUP58Q9BVL2 599 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 SRRTQ9BXP5 876 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 PARVGQ9HBI0 331 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 SLC39A2Q9NP94 309 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms