RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 BTNL9Q6UXG8 535 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 ZNF467Q7Z7K2 595 aaPredicted RBP11.97□□□□□ -0.49
COL11A1-202ENST00000358392 ZNF280CQ8ND82 737 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 TEKT4Q8WW24 435 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 ADNPQ9H2P0 1102 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 NGRNQ9NPE2 291 aaKnown RBP11.97□□□□□ -0.49
COL11A1-202ENST00000358392 CASS4Q9NQ75 786 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 KRT4P19013 534 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 NR5A1Q13285 461 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 CTTNQ14247 550 aaKnown RBP11.97□□□□□ -0.49
COL11A1-202ENST00000358392 ARID5BQ14865 1188 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 MORF4L2Q15014 288 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 DHX38Q92620 1227 aaKnown RBP11.97□□□□□ -0.49
COL11A1-202ENST00000358392 KLHL8Q9P2G9 620 aaPredicted RBP11.97□□□□□ -0.49
COL11A1-202ENST00000358392 CCND2P30279 289 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 ATXN3P54252 364 aaPredicted RBP11.97□□□□□ -0.49
COL11A1-202ENST00000358392 RAD23BP54727 409 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 TRIM60Q495X7 471 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 FSCBQ5H9T9 825 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 ZNF513Q8N8E2 541 aaPredicted RBP11.97□□□□□ -0.49
COL11A1-202ENST00000358392 EXOC4Q96A65 974 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 EPAS1Q99814 870 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 TEX12Q9BXU0 123 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 TM6SF1Q9BZW5 370 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 EIF2AK4Q9P2K8 1649 aaKnown RBP11.97□□□□□ -0.49
COL11A1-202ENST00000358392 CFAP69A5D8W1 941 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 ZNF233A6NK53 670 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 PRPF4O43172 522 aaKnown RBP eCLIP11.97□□□□□ -0.49
COL11A1-202ENST00000358392 PPP6R2O75170 966 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 MYL1P05976 194 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 TRPC1P48995 793 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 DCAF4L1Q3SXM0 396 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 WDR75Q8IWA0 830 aaKnown RBP11.97□□□□□ -0.49
COL11A1-202ENST00000358392 SMAD5Q99717 465 aaKnown RBP11.97□□□□□ -0.49
COL11A1-202ENST00000358392 AURKCQ9UQB9 309 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 PTK2BQ14289 1009 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 CCDC92Q53HC0 331 aaPredicted RBP11.97□□□□□ -0.49
COL11A1-202ENST00000358392 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.97□□□□□ -0.49
COL11A1-202ENST00000358392 DCPSQ96C86 337 aaKnown RBP11.97□□□□□ -0.49
COL11A1-202ENST00000358392 ALG13Q9NP73 1137 aaKnown RBP11.97□□□□□ -0.49
COL11A1-202ENST00000358392 IFNA8P32881 189 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 TSPY1Q01534 308 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 MYO1EQ12965 1108 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 LRRC36Q1X8D7 754 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 SYCP2LQ5T4T6 812 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 GALNT17Q6IS24 598 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 DDIASQ8IXT1 998 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 PDIK1LQ8N165 341 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 PIGSQ96S52 555 aa11.97□□□□□ -0.49
COL11A1-202ENST00000358392 ABCC12Q96J65 1359 aa11.96□□□□□ -0.49
COL11A1-202ENST00000358392 ATP8B1O43520 1251 aa11.96□□□□□ -0.49
COL11A1-202ENST00000358392 GAP43P17677 238 aa11.96□□□□□ -0.49
COL11A1-202ENST00000358392 PLCG1P19174 1290 aa11.96□□□□□ -0.49
COL11A1-202ENST00000358392 CHRNDQ07001 517 aa11.96□□□□□ -0.49
COL11A1-202ENST00000358392 ARHGAP27Q6ZUM4 889 aa11.96□□□□□ -0.49
COL11A1-202ENST00000358392 ERICH1Q86X53 443 aa11.96□□□□□ -0.49
COL11A1-202ENST00000358392 OR6B3Q8NGW1 331 aa11.96□□□□□ -0.49
COL11A1-202ENST00000358392 BTBD6Q96KE9 485 aa11.96□□□□□ -0.49
COL11A1-202ENST00000358392 SLITRK6Q9H5Y7 841 aa11.96□□□□□ -0.49
COL11A1-202ENST00000358392 RWDD2AQ9UIY3 292 aa11.96□□□□□ -0.49
COL11A1-202ENST00000358392 RPS8P62241 208 aaKnown RBP11.96□□□□□ -0.49
COL11A1-202ENST00000358392 DSTYKQ6XUX3 929 aa11.96□□□□□ -0.49
COL11A1-202ENST00000358392 ARMC9Q7Z3E5 817 aa11.96□□□□□ -0.49
COL11A1-202ENST00000358392 TADA2BQ86TJ2 420 aa11.96□□□□□ -0.49
COL11A1-202ENST00000358392 SOS2Q07890 1332 aaPredicted RBP11.96□□□□□ -0.49
COL11A1-202ENST00000358392 KCNQ3O43525 872 aa11.96□□□□□ -0.49
COL11A1-202ENST00000358392 PNMA6AP0CW24 399 aaPredicted RBP11.96□□□□□ -0.49
COL11A1-202ENST00000358392 GFAPP14136 432 aa11.96□□□□□ -0.49
COL11A1-202ENST00000358392 HOXA13P31271 388 aaPredicted RBP11.96□□□□□ -0.49
COL11A1-202ENST00000358392 DMC1Q14565 340 aa11.96□□□□□ -0.49
COL11A1-202ENST00000358392 TGS1Q96RS0 853 aaKnown RBP11.96□□□□□ -0.49
COL11A1-202ENST00000358392 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.96□□□□□ -0.49
COL11A1-202ENST00000358392 ASCC2Q9H1I8 757 aaPredicted RBP11.96□□□□□ -0.49
COL11A1-202ENST00000358392 H0YC42 278 aa11.96□□□□□ -0.5
COL11A1-202ENST00000358392 TJP3O95049 919 aa11.96□□□□□ -0.5
COL11A1-202ENST00000358392 MAGEA9P43362 315 aa11.96□□□□□ -0.5
COL11A1-202ENST00000358392 RPF1Q9H9Y2 349 aaKnown RBP11.96□□□□□ -0.5
COL11A1-202ENST00000358392 TLR7Q9NYK1 1049 aaKnown RBP11.96□□□□□ -0.5
COL11A1-202ENST00000358392 ANAPC7Q9UJX3 599 aa11.96□□□□□ -0.5
COL11A1-202ENST00000358392 ATP11BQ9Y2G3 1177 aa11.96□□□□□ -0.5
COL11A1-202ENST00000358392 TOPBP1Q92547 1522 aa11.96□□□□□ -0.5
COL11A1-202ENST00000358392 EMILIN3Q9NT22 766 aa11.96□□□□□ -0.5
COL11A1-202ENST00000358392 E5RI56 91 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 DAB1O75553 588 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 GFPT1Q06210 699 aaPredicted RBP11.95□□□□□ -0.5
COL11A1-202ENST00000358392 ARL13BQ3SXY8 428 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 EAF2Q96CJ1 260 aaPredicted RBP11.95□□□□□ -0.5
COL11A1-202ENST00000358392 AP5M1Q9H0R1 490 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 ZNF211Q13398 564 aaPredicted RBP11.95□□□□□ -0.5
COL11A1-202ENST00000358392 NBPF20Q3BBV1 942 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 SLC8A2Q9UPR5 921 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 CTIFO43310 598 aaKnown RBP11.95□□□□□ -0.5
COL11A1-202ENST00000358392 APBA3O96018 575 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 EIF3BP55884 814 aaKnown RBP11.95□□□□□ -0.5
COL11A1-202ENST00000358392 HDAC4P56524 1084 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 AP1B1Q10567 949 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 PDXDC1Q6P996 788 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 TTLL7Q6ZT98 887 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 KCTD17Q8N5Z5 321 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 ULK4Q96C45 1275 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms