RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 H0Y3Z8 333 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 RANBP6O60518 1105 aaKnown RBP17.05■□□□□ 0.32
RTN3-205ENST00000356000 ATP5HO75947 161 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 NUDT17P0C025 328 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 PRCPP42785 496 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 CNGA2Q16280 664 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 LIN52Q52LA3 116 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 MEI1Q5TIA1 1274 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 TBC1D9BQ66K14 1250 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 ANKLE1Q8NAG6 615 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 SYMPKQ92797 1274 aaKnown RBP17.05■□□□□ 0.32
RTN3-205ENST00000356000 ARPC5LQ9BPX5 153 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 hCG_2014768A0A024R1R8 64 aa17.04■□□□□ 0.32
RTN3-205ENST00000356000 AKR1B10O60218 316 aa17.04■□□□□ 0.32
RTN3-205ENST00000356000 SUPT3HO75486 399 aa17.04■□□□□ 0.32
RTN3-205ENST00000356000 BCRP11274 1271 aa17.04■□□□□ 0.32
RTN3-205ENST00000356000 NAT1P18440 290 aa17.04■□□□□ 0.32
RTN3-205ENST00000356000 HAND2P61296 217 aa17.04■□□□□ 0.32
RTN3-205ENST00000356000 USH1GQ495M9 461 aa17.04■□□□□ 0.32
RTN3-205ENST00000356000 RNF43Q68DV7 783 aa17.04■□□□□ 0.32
RTN3-205ENST00000356000 ZC3H18Q86VM9 953 aaKnown RBP17.04■□□□□ 0.32
RTN3-205ENST00000356000 IRGQQ8WZA9 623 aa17.04■□□□□ 0.32
RTN3-205ENST00000356000 DBNDD2Q9BQY9 259 aa17.04■□□□□ 0.32
RTN3-205ENST00000356000 PUS3Q9BZE2 481 aaKnown RBP17.04■□□□□ 0.32
RTN3-205ENST00000356000 UBA5Q9GZZ9 404 aa17.04■□□□□ 0.32
RTN3-205ENST00000356000 BLZF1Q9H2G9 400 aa17.04■□□□□ 0.32
RTN3-205ENST00000356000 TBC1D30Q9Y2I9 924 aa17.04■□□□□ 0.32
RTN3-205ENST00000356000 CES2O00748 559 aa17.04■□□□□ 0.32
RTN3-205ENST00000356000 RNASE9P60153 205 aaKnown RBP17.04■□□□□ 0.32
RTN3-205ENST00000356000 DUS1LQ6P1R4 473 aaKnown RBP17.04■□□□□ 0.32
RTN3-205ENST00000356000 TTC8Q8TAM2 541 aa17.04■□□□□ 0.32
RTN3-205ENST00000356000 LRRC8CQ8TDW0 803 aa17.04■□□□□ 0.32
RTN3-205ENST00000356000 RSPH1Q8WYR4 309 aa17.04■□□□□ 0.32
RTN3-205ENST00000356000 STAMQ92783 540 aa17.04■□□□□ 0.32
RTN3-205ENST00000356000 NR1H4Q96RI1 486 aaPredicted RBP17.04■□□□□ 0.32
RTN3-205ENST00000356000 TRPV5Q9NQA5 729 aa17.04■□□□□ 0.32
RTN3-205ENST00000356000 DDX25Q9UHL0 483 aaKnown RBP17.04■□□□□ 0.32
RTN3-205ENST00000356000 TRIM49BA6NDI0 452 aa17.03■□□□□ 0.32
RTN3-205ENST00000356000 CCDC169A6NNP5 214 aa17.03■□□□□ 0.32
RTN3-205ENST00000356000 PALMO75781 387 aa17.03■□□□□ 0.32
RTN3-205ENST00000356000 AGTP01019 485 aa17.03■□□□□ 0.32
RTN3-205ENST00000356000 ANXA1P04083 346 aa17.03■□□□□ 0.32
RTN3-205ENST00000356000 VCAM1P19320 739 aa17.03■□□□□ 0.32
RTN3-205ENST00000356000 HPCAP84074 193 aa17.03■□□□□ 0.32
RTN3-205ENST00000356000 RALYLQ86SE5 291 aaKnown RBP17.03■□□□□ 0.32
RTN3-205ENST00000356000 C2CD5Q86YS7 1000 aa17.03■□□□□ 0.32
RTN3-205ENST00000356000 STAG2Q8N3U4 1231 aa17.03■□□□□ 0.32
RTN3-205ENST00000356000 SCG3Q8WXD2 468 aaKnown RBP17.03■□□□□ 0.32
RTN3-205ENST00000356000 SEC14L1Q92503 715 aa17.03■□□□□ 0.32
RTN3-205ENST00000356000 CENPKQ9BS16 269 aa17.03■□□□□ 0.32
RTN3-205ENST00000356000 TUBGCP2Q9BSJ2 902 aa17.03■□□□□ 0.32
RTN3-205ENST00000356000 MAGEC2Q9UBF1 373 aaPredicted RBP17.03■□□□□ 0.32
RTN3-205ENST00000356000 DAAM1Q9Y4D1 1078 aa17.03■□□□□ 0.32
RTN3-205ENST00000356000 DAPK3O43293 454 aa17.03■□□□□ 0.32
RTN3-205ENST00000356000 RAD21O60216 631 aa17.03■□□□□ 0.32
RTN3-205ENST00000356000 CD97P48960 835 aa17.03■□□□□ 0.32
RTN3-205ENST00000356000 TFCP2Q12800 502 aa17.03■□□□□ 0.32
RTN3-205ENST00000356000 INPP5DQ92835 1189 aa17.03■□□□□ 0.32
RTN3-205ENST00000356000 CATSPER2Q96P56 530 aa17.03■□□□□ 0.32
RTN3-205ENST00000356000 ANGEL1Q9UNK9 670 aaKnown RBP17.03■□□□□ 0.32
RTN3-205ENST00000356000 GTPBP6O43824 516 aaPredicted RBP17.02■□□□□ 0.32
RTN3-205ENST00000356000 VARSP26640 1264 aaKnown RBP17.02■□□□□ 0.32
RTN3-205ENST00000356000 PSMD7P51665 324 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 IFI35P80217 286 aaPredicted RBP17.02■□□□□ 0.32
RTN3-205ENST00000356000 MAP7Q14244 749 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 SNX30Q5VWJ9 437 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 OLFML1Q6UWY5 402 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 COL23A1Q86Y22 540 aaPredicted RBP17.02■□□□□ 0.32
RTN3-205ENST00000356000 ATP11CQ8NB49 1132 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 AGBL1Q96MI9 1066 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 ERGIC2Q96RQ1 377 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 SMC6Q96SB8 1091 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 MPHOSPH6Q99547 160 aaKnown RBP17.02■□□□□ 0.32
RTN3-205ENST00000356000 NLRP2Q9NX02 1062 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 ITGB1BP2Q9UKP3 347 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 GDAQ9Y2T3 454 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 TCP11X1B4DZS4 312 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 UBE2Q2LH0YL09 131 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 FTCDO95954 541 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 RXRAP19793 462 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 DNA2P51530 1060 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 MGAT5Q09328 741 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 SLC39A6Q13433 755 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 KSR2Q6VAB6 950 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 TOM1L2Q6ZVM7 507 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 ADSSL1Q8N142 457 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 EPB41L4BQ9H329 900 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 INIPQ9NRY2 104 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 PAG1Q9NWQ8 432 aa17.02■□□□□ 0.32
RTN3-205ENST00000356000 RGS16O15492 202 aaPredicted RBP17.01■□□□□ 0.31
RTN3-205ENST00000356000 LYNP07948 512 aa17.01■□□□□ 0.31
RTN3-205ENST00000356000 HOXD12P35452 270 aa17.01■□□□□ 0.31
RTN3-205ENST00000356000 RTP1P59025 263 aa17.01■□□□□ 0.31
RTN3-205ENST00000356000 KLC3Q6P597 504 aa17.01■□□□□ 0.31
RTN3-205ENST00000356000 APOA5Q6Q788 366 aa17.01■□□□□ 0.31
RTN3-205ENST00000356000 MIGA2Q7L4E1 593 aa17.01■□□□□ 0.31
RTN3-205ENST00000356000 TMEM110Q86TL2 294 aa17.01■□□□□ 0.31
RTN3-205ENST00000356000 PCMTD1Q96MG8 357 aaPredicted RBP17.01■□□□□ 0.31
RTN3-205ENST00000356000 DENND2DQ9H6A0 471 aaPredicted RBP17.01■□□□□ 0.31
RTN3-205ENST00000356000 AZI2Q9H6S1 392 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms