RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 SETDB2Q96T68 719 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 AP1M1Q9BXS5 423 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 FAM129AQ9BZQ8 928 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 DDX47Q9H0S4 455 aaKnown RBP12.44□□□□□ -0.42
CAPN9-202ENST00000354537 DONSONQ9NYP3 566 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 NARFQ9UHQ1 456 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 KIAA1024Q9UPX6 916 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 E9PMD0 336 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 XRCC5P13010 732 aaKnown RBP12.43□□□□□ -0.42
CAPN9-202ENST00000354537 SLC9A1P19634 815 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 SLC12A3P55017 1021 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 PTENP60484 403 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 MAGOHP61326 146 aaKnown RBP12.43□□□□□ -0.42
CAPN9-202ENST00000354537 DHX34Q14147 1143 aaKnown RBP12.43□□□□□ -0.42
CAPN9-202ENST00000354537 DIXDC1Q155Q3 683 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 KRT71Q3SY84 523 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 CPLX4Q7Z7G2 160 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 DDX42Q86XP3 938 aaKnown RBP eCLIP12.43□□□□□ -0.42
CAPN9-202ENST00000354537 SLFN12Q8IYM2 578 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 MAGOHBQ96A72 148 aaKnown RBP12.43□□□□□ -0.42
CAPN9-202ENST00000354537 XPO6Q96QU8 1125 aaKnown RBP12.43□□□□□ -0.42
CAPN9-202ENST00000354537 TMEM109Q9BVC6 243 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 FGFBP2Q9BYJ0 223 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 CARD9Q9H257 536 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 DHX36Q9H2U1 1008 aaKnown RBP12.43□□□□□ -0.42
CAPN9-202ENST00000354537 CCDC134Q9H6E4 229 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 CD248Q9HCU0 757 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 KCNMB3Q9NPA1 279 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 CNOT7Q9UIV1 285 aaKnown RBP12.43□□□□□ -0.42
CAPN9-202ENST00000354537 MYO3BQ8WXR4 1341 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 MGRN1O60291 552 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 TMEM253P0C7T8 217 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 ERCC3P19447 782 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 LMNB1P20700 586 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 NFIL3Q16649 462 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 QPCTQ16769 361 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 RC3H1Q5TC82 1133 aaKnown RBP12.43□□□□□ -0.42
CAPN9-202ENST00000354537 NBPF5PQ86XG9 351 aaPredicted RBP12.43□□□□□ -0.42
CAPN9-202ENST00000354537 MARCH10Q8NA82 808 aaPredicted RBP12.43□□□□□ -0.42
CAPN9-202ENST00000354537 SLC30A5Q8TAD4 765 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 JMJD4Q9H9V9 463 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 BCCIPQ9P287 314 aaKnown RBP eCLIP12.43□□□□□ -0.42
CAPN9-202ENST00000354537 AMACRQ9UHK6 382 aa12.43□□□□□ -0.42
CAPN9-202ENST00000354537 SPATA31A1Q5TZJ5 1347 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 CCDC169A6NNP5 214 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 TBX3O15119 743 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 PPIP5K2O43314 1243 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 SSBP05455 408 aaKnown RBP eCLIP12.42□□□□□ -0.42
CAPN9-202ENST00000354537 HSPA6P17066 643 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 TMOD1P28289 359 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 STAT1P42224 750 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 ZNF543Q08ER8 600 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 ARSHQ5FYA8 562 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 DUPD1Q68J44 220 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 CCDC197Q8NCU1 140 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 RBM46Q8TBY0 533 aaKnown RBP12.42□□□□□ -0.42
CAPN9-202ENST00000354537 FMO2Q99518 471 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 SIX2Q9NPC8 291 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 TYW1Q9NV66 732 aaKnown RBP12.42□□□□□ -0.42
CAPN9-202ENST00000354537 GOLGA6L10A0A0M3HER8 536 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 CCT8L1PA6NM43 557 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 DDX3XO00571 662 aaKnown RBP eCLIP12.42□□□□□ -0.42
CAPN9-202ENST00000354537 TTI1O43156 1089 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 KRT18P05783 430 aaKnown RBP12.42□□□□□ -0.42
CAPN9-202ENST00000354537 ACTN1P12814 892 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 NF2P35240 595 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 FLT3P36888 993 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 PPATQ06203 517 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 TCEAL1Q15170 157 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 GPATCH4Q5T3I0 446 aaKnown RBP12.42□□□□□ -0.42
CAPN9-202ENST00000354537 PIGWQ7Z7B1 504 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 DAAM2Q86T65 1068 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 ANKS4BQ8N8V4 417 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 ERMNQ8TAM6 284 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 ATP8B4Q8TF62 1192 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 ACSBG1Q96GR2 724 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 ERP44Q9BS26 406 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 POLD4Q9HCU8 107 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 TBC1D7Q9P0N9 293 aa12.42□□□□□ -0.42
CAPN9-202ENST00000354537 COL16A1Q07092 1604 aaPredicted RBP12.41□□□□□ -0.42
CAPN9-202ENST00000354537 GAKO14976 1311 aa12.41□□□□□ -0.42
CAPN9-202ENST00000354537 ITGA4P13612 1032 aa12.41□□□□□ -0.42
CAPN9-202ENST00000354537 EZRP15311 586 aaKnown RBP12.41□□□□□ -0.42
CAPN9-202ENST00000354537 ELF1P32519 619 aa12.41□□□□□ -0.42
CAPN9-202ENST00000354537 MMP13P45452 471 aa12.41□□□□□ -0.42
CAPN9-202ENST00000354537 HADHBP55084 474 aaKnown RBP12.41□□□□□ -0.42
CAPN9-202ENST00000354537 RHBDL3P58872 404 aa12.41□□□□□ -0.42
CAPN9-202ENST00000354537 RIPK1Q13546 671 aa12.41□□□□□ -0.42
CAPN9-202ENST00000354537 GIT2Q14161 759 aa12.41□□□□□ -0.42
CAPN9-202ENST00000354537 BTNL9Q6UXG8 535 aa12.41□□□□□ -0.42
CAPN9-202ENST00000354537 COL23A1Q86Y22 540 aaPredicted RBP12.41□□□□□ -0.42
CAPN9-202ENST00000354537 SYT2Q8N9I0 419 aaPredicted RBP12.41□□□□□ -0.42
CAPN9-202ENST00000354537 LINC00116Q8NCU8 138 aa12.41□□□□□ -0.42
CAPN9-202ENST00000354537 RFFLQ8WZ73 363 aa12.41□□□□□ -0.42
CAPN9-202ENST00000354537 HVCN1Q96D96 273 aa12.41□□□□□ -0.42
CAPN9-202ENST00000354537 ZNF317Q96PQ6 595 aaPredicted RBP12.41□□□□□ -0.42
CAPN9-202ENST00000354537 STMN4Q9H169 189 aaPredicted RBP12.41□□□□□ -0.42
CAPN9-202ENST00000354537 PABPC3Q9H361 631 aaKnown RBP12.41□□□□□ -0.42
CAPN9-202ENST00000354537 ZDHHC18Q9NUE0 388 aa12.41□□□□□ -0.42
CAPN9-202ENST00000354537 JAG2Q9Y219 1238 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms