RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 ANKEF1Q9NU02 776 aa13.21□□□□□ -0.3
SMAD9-201ENST00000350148 XKR3Q5GH77 459 aa13.21□□□□□ -0.3
SMAD9-201ENST00000350148 CCDC127Q96BQ5 260 aa13.21□□□□□ -0.3
SMAD9-201ENST00000350148 NID2Q14112 1375 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 DLATP10515 647 aaKnown RBP13.2□□□□□ -0.3
SMAD9-201ENST00000350148 PAK2Q13177 524 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 GPC2Q8N158 579 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 JPH1Q9HDC5 661 aaPredicted RBP13.2□□□□□ -0.3
SMAD9-201ENST00000350148 CDC23Q9UJX2 597 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 NDUFA10O95299 355 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 PEX3P56589 373 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 BACE1P56817 501 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 PIGOQ8TEQ8 1089 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 PP2D1A8MPX8 630 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 CLIC2O15247 247 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 DGAT1O75907 488 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 CLNS1AP54105 237 aaKnown RBP13.2□□□□□ -0.3
SMAD9-201ENST00000350148 GABPB1Q06547 395 aaPredicted RBP13.2□□□□□ -0.3
SMAD9-201ENST00000350148 RAB17Q9H0T7 212 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 AKT3Q9Y243 479 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 IKBKGQ9Y6K9 419 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 A0A1B0GTH6 734 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 CEP104O60308 925 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 CETPP11597 493 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 EFNA5P52803 228 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 NIPA1Q7RTP0 329 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 CLEC10AQ8IUN9 316 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 DESI2Q9BSY9 194 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 NBPF3Q9H094 633 aa13.2□□□□□ -0.3
SMAD9-201ENST00000350148 TLR3O15455 904 aaKnown RBP13.19□□□□□ -0.3
SMAD9-201ENST00000350148 NR3C2P08235 984 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 RHOXF2BP0C7M4 288 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 PHKA2P46019 1235 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 TOB1P50616 345 aaPredicted RBP13.19□□□□□ -0.3
SMAD9-201ENST00000350148 ENOSF1Q7L5Y1 443 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 PARK7Q99497 189 aaKnown RBP13.19□□□□□ -0.3
SMAD9-201ENST00000350148 RHOXF2Q9BQY4 288 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 MAF1Q9H063 256 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 IFT122Q9HBG6 1241 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 ANKFY1Q9P2R3 1169 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 GABBR1Q9UBS5 961 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 A0A087WWV3 80 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 INO80B-WBP1J3KQ70 363 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 TTC39CQ8N584 583 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 NHEJ1Q9H9Q4 299 aaPredicted RBP13.19□□□□□ -0.3
SMAD9-201ENST00000350148 GINS2Q9Y248 185 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 MED7O43513 233 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 RFC5P40937 340 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 BAATQ14032 418 aaPredicted RBP13.19□□□□□ -0.3
SMAD9-201ENST00000350148 DPH6Q7L8W6 267 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 MIPOL1Q8TD10 442 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 TMEM60Q9H2L4 133 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 PPP1R9AQ9ULJ8 1098 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 HSPA6P17066 643 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 NSFP46459 744 aaKnown RBP13.19□□□□□ -0.3
SMAD9-201ENST00000350148 MTMR3Q13615 1198 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 DAAM2Q86T65 1068 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 ERO1BQ86YB8 467 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 PSPC1Q8WXF1 523 aaKnown RBP13.19□□□□□ -0.3
SMAD9-201ENST00000350148 C17orf75Q9HAS0 396 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 AGTPBP1Q9UPW5 1226 aa13.19□□□□□ -0.3
SMAD9-201ENST00000350148 FAM237AA0A1B0GTK4 181 aa13.18□□□□□ -0.3
SMAD9-201ENST00000350148 PLCB3Q01970 1234 aa13.18□□□□□ -0.3
SMAD9-201ENST00000350148 HADHQ16836 314 aaKnown RBP13.18□□□□□ -0.3
SMAD9-201ENST00000350148 ZNF746Q6NUN9 644 aaPredicted RBP13.18□□□□□ -0.3
SMAD9-201ENST00000350148 SAMD7Q7Z3H4 446 aa13.18□□□□□ -0.3
SMAD9-201ENST00000350148 ELP3Q9H9T3 547 aa13.18□□□□□ -0.3
SMAD9-201ENST00000350148 DDX4Q9NQI0 724 aaKnown RBP13.18□□□□□ -0.3
SMAD9-201ENST00000350148 IRX5P78411 483 aaPredicted RBP13.18□□□□□ -0.3
SMAD9-201ENST00000350148 GRK7Q8WTQ7 553 aa13.18□□□□□ -0.3
SMAD9-201ENST00000350148 MKNK1Q9BUB5 465 aa13.18□□□□□ -0.3
SMAD9-201ENST00000350148 SPTLC3Q9NUV7 552 aa13.18□□□□□ -0.3
SMAD9-201ENST00000350148 HESX1Q9UBX0 185 aa13.18□□□□□ -0.3
SMAD9-201ENST00000350148 KLRG2A4D1S0 409 aaPredicted RBP13.18□□□□□ -0.3
SMAD9-201ENST00000350148 ATP5DP30049 168 aa13.18□□□□□ -0.3
SMAD9-201ENST00000350148 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.18□□□□□ -0.3
SMAD9-201ENST00000350148 ABHD10Q9NUJ1 306 aa13.18□□□□□ -0.3
SMAD9-201ENST00000350148 ERCC3P19447 782 aa13.18□□□□□ -0.3
SMAD9-201ENST00000350148 MAN1A1P33908 653 aa13.18□□□□□ -0.3
SMAD9-201ENST00000350148 GJC1P36383 396 aa13.18□□□□□ -0.3
SMAD9-201ENST00000350148 MAPK6Q16659 721 aa13.18□□□□□ -0.3
SMAD9-201ENST00000350148 MSTO1Q9BUK6 570 aa13.18□□□□□ -0.3
SMAD9-201ENST00000350148 YWHABP31946 246 aaKnown RBP13.18□□□□□ -0.3
SMAD9-201ENST00000350148 ZNF365Q70YC5 407 aa13.18□□□□□ -0.3
SMAD9-201ENST00000350148 DIS3Q9Y2L1 958 aaKnown RBP13.18□□□□□ -0.3
SMAD9-201ENST00000350148 PPME1Q9Y570 386 aa13.18□□□□□ -0.3
SMAD9-201ENST00000350148 ERCC6LQ2NKX8 1250 aa13.17□□□□□ -0.3
SMAD9-201ENST00000350148 SWSAP1Q6NVH7 229 aa13.17□□□□□ -0.3
SMAD9-201ENST00000350148 PBKQ96KB5 322 aa13.17□□□□□ -0.3
SMAD9-201ENST00000350148 RNF216Q9NWF9 866 aaPredicted RBP13.17□□□□□ -0.3
SMAD9-201ENST00000350148 FOXN1O15353 648 aa13.17□□□□□ -0.3
SMAD9-201ENST00000350148 THAP12O43422 761 aa13.17□□□□□ -0.3
SMAD9-201ENST00000350148 PLA2G6O60733 806 aa13.17□□□□□ -0.3
SMAD9-201ENST00000350148 CAPN2P17655 700 aa13.17□□□□□ -0.3
SMAD9-201ENST00000350148 LACTBP83111 547 aaPredicted RBP13.17□□□□□ -0.3
SMAD9-201ENST00000350148 RABGGTAQ92696 567 aa13.17□□□□□ -0.3
SMAD9-201ENST00000350148 CCDC113Q9H0I3 377 aa13.17□□□□□ -0.3
SMAD9-201ENST00000350148 RPF1Q9H9Y2 349 aaKnown RBP13.17□□□□□ -0.3
SMAD9-201ENST00000350148 KCNQ5Q9NR82 932 aa13.17□□□□□ -0.3
SMAD9-201ENST00000350148 JRKLQ9Y4A0 524 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms