RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 ASTN1O14525 1302 aa16.93■□□□□ 0.3
TNFSF13-202ENST00000349228 COL11A2P13942 1736 aaPredicted RBP16.93■□□□□ 0.3
TNFSF13-202ENST00000349228 AGPSO00116 658 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 PSMD10O75832 226 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 FERP16591 822 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 SLC9A1P19634 815 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 MATR3P43243 847 aaKnown RBP eCLIP16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 SNAP25P60880 206 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 TNNC1P63316 161 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 ARID5AQ03989 594 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 PTK2Q05397 1052 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 PPFIA1Q13136 1202 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 PAK2Q13177 524 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 HDAC7Q8WUI4 952 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 SLC35C1Q96A29 364 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 NACC1Q96RE7 527 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 RUSC1Q9BVN2 902 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 NPEPPSP55786 919 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 RPS6KA1Q15418 735 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 EZH2Q15910 746 aaKnown RBP16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 LRCH2Q5VUJ6 765 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 C1orf186Q6ZWK4 172 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 ZNF571Q7Z3V5 609 aaPredicted RBP16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 FAM76AQ8TAV0 307 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 INPP4AQ96PE3 977 aaPredicted RBP16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 SH3GL2Q99962 352 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 PARVGQ9HBI0 331 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 NAGPAQ9UK23 515 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 ODF2LQ9ULJ1 636 aa16.92■□□□□ 0.3
TNFSF13-202ENST00000349228 A0A1W2PRG0 241 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 SHTN1A0MZ66 631 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 EML1O00423 815 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 HSF2BPO75031 334 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 SLITRK3O94933 977 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 CCDC172P0C7W6 258 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 HOXA13P31271 388 aaPredicted RBP16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 PRELPP51888 382 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 JAM2P57087 298 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 CYP4A11Q02928 519 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 ALKBH5Q6P6C2 394 aaKnown RBP16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 FAM160B2Q86V87 743 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 BORCS6Q96GS4 357 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 PSMB7Q99436 277 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 NENFQ9UMX5 172 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 TULP2O00295 520 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 ACTN1P12814 892 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 HSPA1LP34931 641 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 STAT1P42224 750 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 SETQ01105 290 aaPredicted RBP16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 MYBPC2Q14324 1141 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 DCAF17Q5H9S7 520 aaPredicted RBP16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 SYCE1Q8N0S2 351 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 MYCT1Q8N699 235 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 NEK9Q8TD19 979 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 RUFY1Q96T51 708 aa16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 RANBP17Q9H2T7 1088 aaKnown RBP16.91■□□□□ 0.3
TNFSF13-202ENST00000349228 GOLGA6CA6NDK9 693 aa16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 RSPH10B2B2RC85 870 aa16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 TGFB1I1O43294 461 aa16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 FTCDO95954 541 aa16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 RSPH10BP0C881 870 aa16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 GOLGA6DP0CG33 693 aa16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 ZNF131P52739 623 aa16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 SLC7A5Q01650 507 aa16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 TCERG1LQ5VWI1 586 aa16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 HS2ST1Q7LGA3 356 aa16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 GSPT2Q8IYD1 628 aaKnown RBP16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 FAM186BQ8IYM0 893 aa16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 MREGQ8N565 214 aa16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 USP38Q8NB14 1042 aa16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 CALR3Q96L12 384 aaKnown RBP16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 PRMT6Q96LA8 375 aaPredicted RBP16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 SIX2Q9NPC8 291 aa16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 GOLGA6AQ9NYA3 693 aa16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 RGL1Q9NZL6 768 aa16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 PCDHB13Q9Y5F0 798 aa16.9■□□□□ 0.3
TNFSF13-202ENST00000349228 GAS7O60861 476 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 KIF4AO95239 1232 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 VIL1P09327 827 aaKnown RBP16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 H2AFZP0C0S5 128 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 JAG1P78504 1218 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 PPP2R5AQ15172 486 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 H2AFVQ71UI9 128 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 GPIHBP1Q8IV16 184 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 TPH2Q8IWU9 490 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 CYP2W1Q8TAV3 490 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 ACTRT1Q8TDG2 376 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 WHAMMQ8TF30 809 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 C7orf43Q8WVR3 580 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 FAM151AQ8WW52 585 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 VTI1AQ96AJ9 217 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 DYDC2Q96IM9 177 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 MS4A14Q96JA4 679 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 DEFB129Q9H1M3 183 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 GCNT4Q9P109 453 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 TMEM59LQ9UK28 342 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 FRMPD4Q14CM0 1322 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 SHOX2O60902 331 aaPredicted RBP16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 CFBP00751 764 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms