RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 RAD21O60216 631 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 FGFR1OPO95684 399 aaKnown RBP16.44■□□□□ 0.22
PTBP1-201ENST00000349038 GH1P01241 217 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 RARAP10276 462 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 CYP19A1P11511 503 aaPredicted RBP16.44■□□□□ 0.22
PTBP1-201ENST00000349038 ECHS1P30084 290 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 ASIC2Q16515 512 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 CD302Q8IX05 232 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 ARHGEF2Q92974 986 aaKnown RBP16.44■□□□□ 0.22
PTBP1-201ENST00000349038 DHTKD1Q96HY7 919 aaPredicted RBP16.44■□□□□ 0.22
PTBP1-201ENST00000349038 HAO1Q9UJM8 370 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 ERVV-1B6SEH8 477 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 PPFIA2O75334 1257 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 PLCG2P16885 1265 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 CDK17Q00537 523 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 ITIH3Q06033 890 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 TRIP13Q15645 432 aaPredicted RBP16.44■□□□□ 0.22
PTBP1-201ENST00000349038 MAN2A1Q16706 1144 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 HOOK3Q86VS8 718 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 SYCP3Q8IZU3 236 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 RNF10Q8N5U6 811 aaKnown RBP16.44■□□□□ 0.22
PTBP1-201ENST00000349038 UCMAQ8WVF2 138 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 L3MBTL3Q96JM7 780 aaPredicted RBP16.44■□□□□ 0.22
PTBP1-201ENST00000349038 NUDCD1Q96RS6 583 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 SYT15Q9BQS2 421 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 NUP98P52948 1817 aa16.43■□□□□ 0.22
PTBP1-201ENST00000349038 ENTPD5O75356 428 aa16.43■□□□□ 0.22
PTBP1-201ENST00000349038 RHOBTB3O94955 611 aa16.43■□□□□ 0.22
PTBP1-201ENST00000349038 MTMR3Q13615 1198 aa16.43■□□□□ 0.22
PTBP1-201ENST00000349038 PFKFB3Q16875 520 aaPredicted RBP16.43■□□□□ 0.22
PTBP1-201ENST00000349038 MEI1Q5TIA1 1274 aa16.43■□□□□ 0.22
PTBP1-201ENST00000349038 ZC3H18Q86VM9 953 aaKnown RBP16.43■□□□□ 0.22
PTBP1-201ENST00000349038 PCDHGC5Q9Y5F6 944 aa16.43■□□□□ 0.22
PTBP1-201ENST00000349038 CICQ96RK0 1608 aaPredicted RBP16.43■□□□□ 0.22
PTBP1-201ENST00000349038 STXBP3O00186 592 aa16.43■□□□□ 0.22
PTBP1-201ENST00000349038 ZCCHC18P0CG32 403 aa16.43■□□□□ 0.22
PTBP1-201ENST00000349038 ETS2P15036 469 aa16.43■□□□□ 0.22
PTBP1-201ENST00000349038 CCND1P24385 295 aa16.43■□□□□ 0.22
PTBP1-201ENST00000349038 LACTB2Q53H82 288 aaPredicted RBP16.43■□□□□ 0.22
PTBP1-201ENST00000349038 GJB7Q6PEY0 223 aa16.43■□□□□ 0.22
PTBP1-201ENST00000349038 SLC4A9Q96Q91 983 aa16.43■□□□□ 0.22
PTBP1-201ENST00000349038 ERGIC2Q96RQ1 377 aa16.43■□□□□ 0.22
PTBP1-201ENST00000349038 PAGR1Q9BTK6 254 aa16.43■□□□□ 0.22
PTBP1-201ENST00000349038 OSGEPQ9NPF4 335 aa16.43■□□□□ 0.22
PTBP1-201ENST00000349038 TSKSQ9UJT2 592 aa16.43■□□□□ 0.22
PTBP1-201ENST00000349038 ZBTB1Q9Y2K1 713 aa16.43■□□□□ 0.22
PTBP1-201ENST00000349038 SIK3Q9Y2K2 1263 aa16.43■□□□□ 0.22
PTBP1-201ENST00000349038 SUN1O94901 812 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 PCP11498 1178 aaKnown RBP16.42■□□□□ 0.22
PTBP1-201ENST00000349038 KCNJ1P48048 391 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 PMS2P54278 862 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 COPS2P61201 443 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 PTK2Q05397 1052 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 CUL1Q13616 776 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 RASIP1Q5U651 963 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 TTC8Q8TAM2 541 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 NEK9Q8TD19 979 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 RMDN2Q96LZ7 410 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 EPAS1Q99814 870 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 BRIP1Q9BX63 1249 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.42■□□□□ 0.22
PTBP1-201ENST00000349038 POTEMA6NI47 508 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 MYL1P05976 194 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 CYP2D6P10635 497 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 TRAF1Q13077 416 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 NAB2Q15742 525 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 INTS8Q75QN2 995 aaKnown RBP16.42■□□□□ 0.22
PTBP1-201ENST00000349038 FITM2Q8N6M3 262 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 SPATA31A6Q5VVP1 1343 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 KRT18P05783 430 aaKnown RBP16.42■□□□□ 0.22
PTBP1-201ENST00000349038 UBTFL6P0CB48 400 aaPredicted RBP16.42■□□□□ 0.22
PTBP1-201ENST00000349038 BLMHQ13867 455 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 HP1BP3Q5SSJ5 553 aaPredicted RBP16.42■□□□□ 0.22
PTBP1-201ENST00000349038 APBB1IPQ7Z5R6 666 aaPredicted RBP16.42■□□□□ 0.22
PTBP1-201ENST00000349038 BAP1Q92560 729 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 EZH1Q92800 747 aaPredicted RBP16.42■□□□□ 0.22
PTBP1-201ENST00000349038 IFT74Q96LB3 600 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 CORO1CQ9ULV4 474 aaPredicted RBP16.42■□□□□ 0.22
PTBP1-201ENST00000349038 DAAM1Q9Y4D1 1078 aa16.42■□□□□ 0.22
PTBP1-201ENST00000349038 RREB1Q92766 1687 aa16.41■□□□□ 0.22
PTBP1-201ENST00000349038 A0A1W2PQJ5 194 aa16.41■□□□□ 0.22
PTBP1-201ENST00000349038 ZNF131P52739 623 aa16.41■□□□□ 0.22
PTBP1-201ENST00000349038 FIGNQ5HY92 759 aa16.41■□□□□ 0.22
PTBP1-201ENST00000349038 ALKBH5Q6P6C2 394 aaKnown RBP16.41■□□□□ 0.22
PTBP1-201ENST00000349038 ARMC9Q7Z3E5 817 aa16.41■□□□□ 0.22
PTBP1-201ENST00000349038 MREGQ8N565 214 aa16.41■□□□□ 0.22
PTBP1-201ENST00000349038 KBTBD4Q9NVX7 518 aa16.41■□□□□ 0.22
PTBP1-201ENST00000349038 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.41■□□□□ 0.221e-6■■□□□ 13.4
PTBP1-201ENST00000349038 USP15Q9Y4E8 981 aaPredicted RBP16.41■□□□□ 0.22
PTBP1-201ENST00000349038 STX2P32856 288 aa16.41■□□□□ 0.22
PTBP1-201ENST00000349038 RCN2Q14257 317 aa16.41■□□□□ 0.22
PTBP1-201ENST00000349038 CNNM4Q6P4Q7 775 aa16.41■□□□□ 0.22
PTBP1-201ENST00000349038 LRIG3Q6UXM1 1119 aa16.41■□□□□ 0.22
PTBP1-201ENST00000349038 CALML4Q96GE6 196 aa16.41■□□□□ 0.22
PTBP1-201ENST00000349038 RHBDL2Q9NX52 303 aa16.41■□□□□ 0.22
PTBP1-201ENST00000349038 RASGRF2O14827 1237 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 SLC9A1P19634 815 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 KCNMA1Q12791 1236 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 HGSNATQ68CP4 663 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 SUPT20HQ8NEM7 779 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms