RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 KIF2CQ99661 725 aa18.1■□□□□ 0.49
ATG4B-201ENST00000344376 COL6A3P12111 3177 aa18.1■□□□□ 0.49
ATG4B-201ENST00000344376 KDM3AQ9Y4C1 1321 aa18.1■□□□□ 0.49
ATG4B-201ENST00000344376 TBX3O15119 743 aa18.09■□□□□ 0.49
ATG4B-201ENST00000344376 HMGN5P82970 282 aaKnown RBP18.09■□□□□ 0.49
ATG4B-201ENST00000344376 ST3GAL1Q11201 340 aa18.09■□□□□ 0.49
ATG4B-201ENST00000344376 PAK2Q13177 524 aa18.09■□□□□ 0.49
ATG4B-201ENST00000344376 KIAA0319LQ8IZA0 1049 aa18.09■□□□□ 0.49
ATG4B-201ENST00000344376 IL27Q8NEV9 243 aa18.09■□□□□ 0.49
ATG4B-201ENST00000344376 TOP1MTQ969P6 601 aa18.09■□□□□ 0.49
ATG4B-201ENST00000344376 MAP7D2Q96T17 732 aa18.09■□□□□ 0.49
ATG4B-201ENST00000344376 FTHL17Q9BXU8 183 aa18.09■□□□□ 0.49
ATG4B-201ENST00000344376 CERS4Q9HA82 394 aa18.09■□□□□ 0.49
ATG4B-201ENST00000344376 KCNMB3Q9NPA1 279 aa18.09■□□□□ 0.49
ATG4B-201ENST00000344376 GINS2Q9Y248 185 aa18.09■□□□□ 0.49
ATG4B-201ENST00000344376 CHD9Q3L8U1 2897 aa18.09■□□□□ 0.49
ATG4B-201ENST00000344376 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.08■□□□□ 0.49
ATG4B-201ENST00000344376 LCHNA4D1U4 455 aa18.08■□□□□ 0.49
ATG4B-201ENST00000344376 ST18O60284 1047 aa18.08■□□□□ 0.49
ATG4B-201ENST00000344376 ZNF862O60290 1169 aa18.08■□□□□ 0.49
ATG4B-201ENST00000344376 UPP2O95045 317 aa18.08■□□□□ 0.49
ATG4B-201ENST00000344376 BAG4O95429 457 aaKnown RBP18.08■□□□□ 0.49
ATG4B-201ENST00000344376 TMOD1P28289 359 aa18.08■□□□□ 0.49
ATG4B-201ENST00000344376 CD52P31358 61 aa18.08■□□□□ 0.49
ATG4B-201ENST00000344376 ODR4Q5SWX8 454 aa18.08■□□□□ 0.49
ATG4B-201ENST00000344376 B3GNT9Q6UX72 402 aa18.08■□□□□ 0.49
ATG4B-201ENST00000344376 TNFRSF25Q93038 417 aa18.08■□□□□ 0.49
ATG4B-201ENST00000344376 YME1L1Q96TA2 773 aa18.08■□□□□ 0.49
ATG4B-201ENST00000344376 BTBD18B2RXH4 712 aa18.08■□□□□ 0.48
ATG4B-201ENST00000344376 GTPBP6O43824 516 aaPredicted RBP18.08■□□□□ 0.48
ATG4B-201ENST00000344376 DKC1O60832 514 aaKnown RBP eCLIP18.08■□□□□ 0.48
ATG4B-201ENST00000344376 PPP2R5CQ13362 524 aa18.08■□□□□ 0.48
ATG4B-201ENST00000344376 ADGRE1Q14246 886 aa18.08■□□□□ 0.48
ATG4B-201ENST00000344376 UGCGQ16739 394 aa18.08■□□□□ 0.48
ATG4B-201ENST00000344376 XKR3Q5GH77 459 aa18.08■□□□□ 0.48
ATG4B-201ENST00000344376 EARS2Q5JPH6 523 aaKnown RBP18.08■□□□□ 0.48
ATG4B-201ENST00000344376 FAM43BQ6ZT52 329 aaPredicted RBP18.08■□□□□ 0.48
ATG4B-201ENST00000344376 SLFN12Q8IYM2 578 aa18.08■□□□□ 0.48
ATG4B-201ENST00000344376 C8orf76Q96K31 380 aa18.08■□□□□ 0.48
ATG4B-201ENST00000344376 TGS1Q96RS0 853 aaKnown RBP18.08■□□□□ 0.48
ATG4B-201ENST00000344376 AGO3Q9H9G7 860 aaKnown RBP18.08■□□□□ 0.48
ATG4B-201ENST00000344376 SEPT9Q9UHD8 586 aaPredicted RBP18.08■□□□□ 0.48
ATG4B-201ENST00000344376 MICAL3Q7RTP6 2002 aa18.07■□□□□ 0.48
ATG4B-201ENST00000344376 CDH23Q9H251 3354 aa18.07■□□□□ 0.48
ATG4B-201ENST00000344376 ARHGEF15O94989 841 aa18.07■□□□□ 0.48
ATG4B-201ENST00000344376 HTRA4P83105 476 aaPredicted RBP18.07■□□□□ 0.48
ATG4B-201ENST00000344376 TBC1D8BQ0IIM8 1120 aa18.07■□□□□ 0.48
ATG4B-201ENST00000344376 POTEDQ86YR6 584 aa18.07■□□□□ 0.48
ATG4B-201ENST00000344376 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.07■□□□□ 0.48
ATG4B-201ENST00000344376 ZNF710Q8N1W2 664 aa18.07■□□□□ 0.48
ATG4B-201ENST00000344376 FAM184AQ8NB25 1140 aa18.07■□□□□ 0.48
ATG4B-201ENST00000344376 VAV3Q9UKW4 847 aa18.07■□□□□ 0.48
ATG4B-201ENST00000344376 PADI3Q9ULW8 664 aa18.07■□□□□ 0.48
ATG4B-201ENST00000344376 PTPRSQ13332 1948 aa18.06■□□□□ 0.48
ATG4B-201ENST00000344376 LINC01553A4QN01 128 aa18.06■□□□□ 0.48
ATG4B-201ENST00000344376 FAM205CA6NFA0 338 aa18.06■□□□□ 0.48
ATG4B-201ENST00000344376 RBAK-RBAKDNI3L0D1 243 aa18.06■□□□□ 0.48
ATG4B-201ENST00000344376 PSMC5P62195 406 aa18.06■□□□□ 0.48
ATG4B-201ENST00000344376 EFCAB12Q6NXP0 572 aa18.06■□□□□ 0.48
ATG4B-201ENST00000344376 AKT3Q9Y243 479 aa18.06■□□□□ 0.48
ATG4B-201ENST00000344376 ENPP3O14638 875 aa18.05■□□□□ 0.48
ATG4B-201ENST00000344376 RPS6KA5O75582 802 aa18.05■□□□□ 0.48
ATG4B-201ENST00000344376 CLCN3P51790 818 aa18.05■□□□□ 0.48
ATG4B-201ENST00000344376 CRYBB1P53674 252 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-201ENST00000344376 ERVK-21P61565 698 aa18.05■□□□□ 0.48
ATG4B-201ENST00000344376 KIZQ2M2Z5 673 aa18.05■□□□□ 0.48
ATG4B-201ENST00000344376 BANK1Q8NDB2 785 aa18.05■□□□□ 0.48
ATG4B-201ENST00000344376 SP7Q8TDD2 431 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-201ENST00000344376 PPM1EQ8WY54 764 aa18.05■□□□□ 0.48
ATG4B-201ENST00000344376 HAS1Q92839 578 aa18.05■□□□□ 0.48
ATG4B-201ENST00000344376 MYH9P35579 1960 aaKnown RBP18.05■□□□□ 0.48
ATG4B-201ENST00000344376 SIP14410 1827 aa18.05■□□□□ 0.48
ATG4B-201ENST00000344376 VTNP04004 478 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 QARSP47897 775 aaKnown RBP18.04■□□□□ 0.48
ATG4B-201ENST00000344376 GUCY1B3Q02153 619 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 NFX1Q12986 1120 aaKnown RBP18.04■□□□□ 0.48
ATG4B-201ENST00000344376 GNL2Q13823 731 aaKnown RBP18.04■□□□□ 0.48
ATG4B-201ENST00000344376 CALCRLQ16602 461 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 MTERF2Q49AM1 385 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 MICALL1Q8N3F8 863 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 SAMD11Q96NU1 681 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 PPP1R16BQ96T49 567 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 NIFKQ9BYG3 293 aaKnown RBP18.04■□□□□ 0.48
ATG4B-201ENST00000344376 SUGCTQ9HAC7 445 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 MTUS1Q9ULD2 1270 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 EPOPA6NHQ4 379 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 DDX11L8A8MPP1 907 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 RFXAPO00287 272 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 EML1O00423 815 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 GPR182O15218 404 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 NEMFO60524 1076 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 P4HBP07237 508 aaKnown RBP18.04■□□□□ 0.48
ATG4B-201ENST00000344376 EPHA7Q15375 998 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 TMEM266Q2M3C6 531 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 NCAPH2Q6IBW4 605 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 LRRC71Q8N4P6 559 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 SCLT1Q96NL6 688 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 OSMRQ99650 979 aa18.04■□□□□ 0.48
ATG4B-201ENST00000344376 JPH2Q9BR39 696 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-201ENST00000344376 TSPYL2Q9H2G4 693 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms