RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 HSD17B14Q9BPX1 270 aa15.94■□□□□ 0.14
TDP2-201ENST00000341060 TDRD3Q9H7E2 651 aaKnown RBP15.94■□□□□ 0.14
TDP2-201ENST00000341060 NAGPAQ9UK23 515 aa15.94■□□□□ 0.14
TDP2-201ENST00000341060 PACSIN2Q9UNF0 486 aaPredicted RBP15.94■□□□□ 0.14
TDP2-201ENST00000341060 GOLGA6CA6NDK9 693 aa15.93■□□□□ 0.14
TDP2-201ENST00000341060 EIF3DO15371 548 aaKnown RBP eCLIP15.93■□□□□ 0.14
TDP2-201ENST00000341060 SHOX2O60902 331 aaPredicted RBP15.93■□□□□ 0.14
TDP2-201ENST00000341060 GLI1P08151 1106 aa15.93■□□□□ 0.14
TDP2-201ENST00000341060 GOLGA6DP0CG33 693 aa15.93■□□□□ 0.14
TDP2-201ENST00000341060 JAM2P57087 298 aa15.93■□□□□ 0.14
TDP2-201ENST00000341060 LRRC31Q6UY01 552 aa15.93■□□□□ 0.14
TDP2-201ENST00000341060 FAM76AQ8TAV0 307 aa15.93■□□□□ 0.14
TDP2-201ENST00000341060 UPF1Q92900 1129 aaKnown RBP eCLIP15.93■□□□□ 0.14
TDP2-201ENST00000341060 CSRNP1Q96S65 589 aa15.93■□□□□ 0.14
TDP2-201ENST00000341060 TUFT1Q9NNX1 390 aa15.93■□□□□ 0.14
TDP2-201ENST00000341060 SIX2Q9NPC8 291 aa15.93■□□□□ 0.14
TDP2-201ENST00000341060 GOLGA6AQ9NYA3 693 aa15.93■□□□□ 0.14
TDP2-201ENST00000341060 RGL1Q9NZL6 768 aa15.93■□□□□ 0.14
TDP2-201ENST00000341060 ZMYM2Q9UBW7 1377 aa15.93■□□□□ 0.14
TDP2-201ENST00000341060 CASP4P49662 377 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 KCNA1Q09470 495 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 TRAF1Q13077 416 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 RRP1BQ14684 758 aaKnown RBP15.92■□□□□ 0.14
TDP2-201ENST00000341060 TCERG1LQ5VWI1 586 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 ALS2CLQ60I27 953 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.92■□□□□ 0.14
TDP2-201ENST00000341060 OTOP1Q7RTM1 612 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 SPICE1Q8N0Z3 855 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 GCNT4Q9P109 453 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 NENFQ9UMX5 172 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 GOLGA8KD6RF30 607 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 H0YIN7 160 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 TGFB1I1O43294 461 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 FLOT1O75955 427 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 CLSTN1O94985 981 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 HEXIM1O94992 359 aaKnown RBP15.92■□□□□ 0.14
TDP2-201ENST00000341060 DNA2P51530 1060 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 PPFIA1Q13136 1202 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 PPP2R5CQ13362 524 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 NFIL3Q16649 462 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 IFI16Q16666 785 aaKnown RBP15.92■□□□□ 0.14
TDP2-201ENST00000341060 STYK1Q6J9G0 422 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 USP38Q8NB14 1042 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 TSEN2Q8NCE0 465 aaKnown RBP15.92■□□□□ 0.14
TDP2-201ENST00000341060 WDR18Q9BV38 432 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 BCAS3Q9H6U6 928 aa15.92■□□□□ 0.14
TDP2-201ENST00000341060 OPA1O60313 960 aa15.91■□□□□ 0.14
TDP2-201ENST00000341060 PSMD10O75832 226 aa15.91■□□□□ 0.14
TDP2-201ENST00000341060 R3HDM1Q15032 1099 aaKnown RBP15.91■□□□□ 0.14
TDP2-201ENST00000341060 LRCH2Q5VUJ6 765 aa15.91■□□□□ 0.14
TDP2-201ENST00000341060 CC2D2BQ6DHV5 1058 aa15.91■□□□□ 0.14
TDP2-201ENST00000341060 ALKBH5Q6P6C2 394 aaKnown RBP15.91■□□□□ 0.14
TDP2-201ENST00000341060 LRRC57Q8N9N7 239 aa15.91■□□□□ 0.14
TDP2-201ENST00000341060 PIGOQ8TEQ8 1089 aa15.91■□□□□ 0.14
TDP2-201ENST00000341060 BORCS6Q96GS4 357 aa15.91■□□□□ 0.14
TDP2-201ENST00000341060 HERC5Q9UII4 1024 aaKnown RBP15.91■□□□□ 0.14
TDP2-201ENST00000341060 TMEM59LQ9UK28 342 aa15.91■□□□□ 0.14
TDP2-201ENST00000341060 CLIC2O15247 247 aa15.91■□□□□ 0.14
TDP2-201ENST00000341060 SLITRK3O94933 977 aa15.91■□□□□ 0.14
TDP2-201ENST00000341060 PAK2Q13177 524 aa15.91■□□□□ 0.14
TDP2-201ENST00000341060 CTTNQ14247 550 aaKnown RBP15.91■□□□□ 0.14
TDP2-201ENST00000341060 C1orf186Q6ZWK4 172 aa15.91■□□□□ 0.14
TDP2-201ENST00000341060 SRLQ86TD4 932 aa15.91■□□□□ 0.14
TDP2-201ENST00000341060 ZNF219Q9P2Y4 722 aaPredicted RBP15.91■□□□□ 0.14
TDP2-201ENST00000341060 AJAP1Q9UKB5 411 aaPredicted RBP15.91■□□□□ 0.14
TDP2-201ENST00000341060 FRMPD4Q14CM0 1322 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 HSF2BPO75031 334 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 FAM13AO94988 1023 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 KIF4AO95239 1232 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 CFBP00751 764 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 MUTP22033 750 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 POLD1P28340 1107 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 ECE1P42892 770 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 CARSP49589 748 aaKnown RBP15.9■□□□□ 0.14
TDP2-201ENST00000341060 IRX5P78411 483 aaPredicted RBP15.9■□□□□ 0.14
TDP2-201ENST00000341060 GUCY2DQ02846 1103 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 RPS6KA1Q15418 735 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 AOC3Q16853 763 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 VPS36Q86VN1 386 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 TAF4BQ92750 862 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 SLC5A5Q92911 643 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 PRMT6Q96LA8 375 aaPredicted RBP15.9■□□□□ 0.14
TDP2-201ENST00000341060 RUFY1Q96T51 708 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 KRT12Q99456 494 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 MKNK1Q9BUB5 465 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 ARHGEF10LQ9HCE6 1279 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 EPB41L5Q9HCM4 733 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 POLD4Q9HCU8 107 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 PCDHB13Q9Y5F0 798 aa15.9■□□□□ 0.14
TDP2-201ENST00000341060 UBE4BO95155 1302 aa15.89■□□□□ 0.14
TDP2-201ENST00000341060 SHTN1A0MZ66 631 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 ZSCAN5CA6NGD5 496 aaPredicted RBP15.89■□□□□ 0.13
TDP2-201ENST00000341060 SFI1A8K8P3 1242 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 PPP1R12BO60237 982 aaPredicted RBP15.89■□□□□ 0.13
TDP2-201ENST00000341060 TNNC1P63316 161 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 TPH2Q8IWU9 490 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 MREGQ8N565 214 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 MYCT1Q8N699 235 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 SLC16A10Q8TF71 515 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 DYDC2Q96IM9 177 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms