RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SPATA6Q9NWH7 488 aaPredicted RBP13.43□□□□□ -0.26
ATXN3-201ENST00000340660 PA2G4Q9UQ80 394 aaKnown RBP13.43□□□□□ -0.26
ATXN3-201ENST00000340660 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.43□□□□□ -0.26
ATXN3-201ENST00000340660 CELSR3Q9NYQ7 3312 aa13.42□□□□□ -0.26
ATXN3-201ENST00000340660 APAF1O14727 1248 aa13.42□□□□□ -0.26
ATXN3-201ENST00000340660 FSCN2O14926 492 aa13.42□□□□□ -0.26
ATXN3-201ENST00000340660 DGKIO75912 1065 aa13.42□□□□□ -0.26
ATXN3-201ENST00000340660 RETP07949 1114 aa13.42□□□□□ -0.26
ATXN3-201ENST00000340660 LIMK1P53667 647 aa13.42□□□□□ -0.26
ATXN3-201ENST00000340660 C19orf57Q0VDD7 668 aa13.42□□□□□ -0.26
ATXN3-201ENST00000340660 CBLBQ13191 982 aa13.42□□□□□ -0.26
ATXN3-201ENST00000340660 TPRNQ4KMQ1 711 aa13.42□□□□□ -0.26
ATXN3-201ENST00000340660 INTS6LQ5JSJ4 861 aaKnown RBP13.42□□□□□ -0.26
ATXN3-201ENST00000340660 LAIR1Q6GTX8 287 aa13.42□□□□□ -0.26
ATXN3-201ENST00000340660 Q6ZVU0 165 aa13.42□□□□□ -0.26
ATXN3-201ENST00000340660 C7orf31Q8N865 590 aa13.42□□□□□ -0.26
ATXN3-201ENST00000340660 PJA1Q8NG27 643 aa13.42□□□□□ -0.26
ATXN3-201ENST00000340660 FEZF2Q8TBJ5 459 aa13.42□□□□□ -0.26
ATXN3-201ENST00000340660 PGPEP1Q9NXJ5 209 aa13.42□□□□□ -0.26
ATXN3-201ENST00000340660 PATJQ8NI35 1801 aa13.41□□□□□ -0.26
ATXN3-201ENST00000340660 VAMP4O75379 141 aa13.41□□□□□ -0.26
ATXN3-201ENST00000340660 C1QL1O75973 258 aa13.41□□□□□ -0.26
ATXN3-201ENST00000340660 POLR3DP05423 398 aaPredicted RBP13.41□□□□□ -0.26
ATXN3-201ENST00000340660 PPP2R5BQ15173 497 aa13.41□□□□□ -0.26
ATXN3-201ENST00000340660 PSAPL1Q6NUJ1 521 aa13.41□□□□□ -0.26
ATXN3-201ENST00000340660 RNF146Q9NTX7 359 aa13.41□□□□□ -0.26
ATXN3-201ENST00000340660 STK17AQ9UEE5 414 aa13.41□□□□□ -0.26
ATXN3-201ENST00000340660 DNMT3LQ9UJW3 386 aa13.41□□□□□ -0.26
ATXN3-201ENST00000340660 DBR1Q9UK59 544 aaKnown RBP13.41□□□□□ -0.26
ATXN3-201ENST00000340660 CTDP1Q9Y5B0 961 aaPredicted RBP13.41□□□□□ -0.26
ATXN3-201ENST00000340660 NKRFO15226 690 aaKnown RBP eCLIP13.4□□□□□ -0.26
ATXN3-201ENST00000340660 ARHGAP6O43182 974 aa13.4□□□□□ -0.26
ATXN3-201ENST00000340660 OAZ1P54368 228 aa13.4□□□□□ -0.26
ATXN3-201ENST00000340660 KIAA1841Q6NSI8 718 aa13.4□□□□□ -0.26
ATXN3-201ENST00000340660 XRRA1Q6P2D8 792 aa13.4□□□□□ -0.26
ATXN3-201ENST00000340660 TSSK4Q6SA08 328 aa13.4□□□□□ -0.26
ATXN3-201ENST00000340660 AFG1LQ8WV93 481 aa13.4□□□□□ -0.26
ATXN3-201ENST00000340660 ALG1Q9BT22 464 aa13.4□□□□□ -0.26
ATXN3-201ENST00000340660 SCNM1Q9BWG6 230 aa13.4□□□□□ -0.26
ATXN3-201ENST00000340660 SNRKQ9NRH2 765 aa13.4□□□□□ -0.26
ATXN3-201ENST00000340660 MYO9AB2RTY4 2548 aa13.39□□□□□ -0.27
ATXN3-201ENST00000340660 CYP7A1P22680 504 aa13.39□□□□□ -0.27
ATXN3-201ENST00000340660 PDE4BQ07343 736 aa13.39□□□□□ -0.27
ATXN3-201ENST00000340660 PLPP4Q5VZY2 271 aa13.39□□□□□ -0.27
ATXN3-201ENST00000340660 KANK3Q6NY19 840 aa13.39□□□□□ -0.27
ATXN3-201ENST00000340660 SERINC5Q86VE9 423 aa13.39□□□□□ -0.27
ATXN3-201ENST00000340660 LRRC47Q8N1G4 583 aaKnown RBP13.39□□□□□ -0.27
ATXN3-201ENST00000340660 PNMA1Q8ND90 353 aa13.39□□□□□ -0.27
ATXN3-201ENST00000340660 CASP10Q92851 521 aa13.39□□□□□ -0.27
ATXN3-201ENST00000340660 APBB2Q92870 758 aa13.39□□□□□ -0.27
ATXN3-201ENST00000340660 DYNLL2Q96FJ2 89 aa13.39□□□□□ -0.27
ATXN3-201ENST00000340660 LSM14BQ9BX40 385 aaKnown RBP13.39□□□□□ -0.27
ATXN3-201ENST00000340660 USP44Q9H0E7 712 aa13.39□□□□□ -0.27
ATXN3-201ENST00000340660 ARHGEF3Q9NR81 526 aa13.39□□□□□ -0.27
ATXN3-201ENST00000340660 CYP39A1Q9NYL5 469 aa13.39□□□□□ -0.27
ATXN3-201ENST00000340660 DENND4AQ7Z401 1863 aa13.38□□□□□ -0.27
ATXN3-201ENST00000340660 HIDE1A8MVS5 230 aa13.38□□□□□ -0.27
ATXN3-201ENST00000340660 ARIH2O95376 493 aa13.38□□□□□ -0.27
ATXN3-201ENST00000340660 CTSHP09668 335 aa13.38□□□□□ -0.27
ATXN3-201ENST00000340660 CYP2D6P10635 497 aa13.38□□□□□ -0.27
ATXN3-201ENST00000340660 UBE3AQ05086 875 aa13.38□□□□□ -0.27
ATXN3-201ENST00000340660 DHX9Q08211 1270 aaKnown RBP13.38□□□□□ -0.27
ATXN3-201ENST00000340660 APOBRQ0VD83 1088 aa13.38□□□□□ -0.27
ATXN3-201ENST00000340660 TMEM259Q4ZIN3 620 aa13.38□□□□□ -0.27
ATXN3-201ENST00000340660 RARS2Q5T160 578 aaKnown RBP13.38□□□□□ -0.27
ATXN3-201ENST00000340660 CMTR2Q8IYT2 770 aaKnown RBP13.38□□□□□ -0.27
ATXN3-201ENST00000340660 C12orf76Q8N812 135 aaPredicted RBP13.38□□□□□ -0.27
ATXN3-201ENST00000340660 GPR152Q8TDT2 470 aa13.38□□□□□ -0.27
ATXN3-201ENST00000340660 RSAD2Q8WXG1 361 aa13.38□□□□□ -0.27
ATXN3-201ENST00000340660 RAB23Q9ULC3 237 aa13.38□□□□□ -0.27
ATXN3-201ENST00000340660 GIPC1O14908 333 aa13.37□□□□□ -0.27
ATXN3-201ENST00000340660 CYP2E1P05181 493 aaPredicted RBP13.37□□□□□ -0.27
ATXN3-201ENST00000340660 LORP23490 312 aaPredicted RBP13.37□□□□□ -0.27
ATXN3-201ENST00000340660 ALDH5A1P51649 535 aaPredicted RBP13.37□□□□□ -0.27
ATXN3-201ENST00000340660 SRSF1Q07955 248 aaKnown RBP eCLIP13.37□□□□□ -0.27
ATXN3-201ENST00000340660 TFCP2Q12800 502 aa13.37□□□□□ -0.27
ATXN3-201ENST00000340660 PAN2Q504Q3 1202 aaKnown RBP13.37□□□□□ -0.27
ATXN3-201ENST00000340660 MUM1L1Q5H9M0 696 aa13.37□□□□□ -0.27
ATXN3-201ENST00000340660 NEUROD6Q96NK8 337 aa13.37□□□□□ -0.27
ATXN3-201ENST00000340660 RAI2Q9Y5P3 530 aa13.37□□□□□ -0.27
ATXN3-201ENST00000340660 HCFC2Q9Y5Z7 792 aa13.37□□□□□ -0.27
ATXN3-201ENST00000340660 MYO5AQ9Y4I1 1855 aaKnown RBP13.37□□□□□ -0.27
ATXN3-201ENST00000340660 TICRRQ7Z2Z1 1910 aa13.37□□□□□ -0.27
ATXN3-201ENST00000340660 HAS3O00219 553 aa13.36□□□□□ -0.27
ATXN3-201ENST00000340660 VSIG8P0DPA2 414 aa13.36□□□□□ -0.27
ATXN3-201ENST00000340660 PROSER1Q86XN7 944 aa13.36□□□□□ -0.27
ATXN3-201ENST00000340660 TMEFF1Q8IYR6 380 aa13.36□□□□□ -0.27
ATXN3-201ENST00000340660 ACSF2Q96CM8 615 aaPredicted RBP13.36□□□□□ -0.27
ATXN3-201ENST00000340660 TRERF1Q96PN7 1200 aa13.36□□□□□ -0.27
ATXN3-201ENST00000340660 PIH1D3Q9NQM4 214 aaKnown RBP13.36□□□□□ -0.27
ATXN3-201ENST00000340660 IGSF9Q9P2J2 1179 aa13.36□□□□□ -0.27
ATXN3-201ENST00000340660 ENPP3O14638 875 aa13.35□□□□□ -0.27
ATXN3-201ENST00000340660 NDUFB10O96000 172 aa13.35□□□□□ -0.27
ATXN3-201ENST00000340660 TXNP10599 105 aaKnown RBP13.35□□□□□ -0.27
ATXN3-201ENST00000340660 SRFP11831 508 aa13.35□□□□□ -0.27
ATXN3-201ENST00000340660 ZNF252P-AS1Q0IIN9 211 aa13.35□□□□□ -0.27
ATXN3-201ENST00000340660 WDR43Q15061 677 aaKnown RBP eCLIP13.35□□□□□ -0.27
ATXN3-201ENST00000340660 KIAA0753Q2KHM9 967 aa13.35□□□□□ -0.27
ATXN3-201ENST00000340660 AASDHQ4L235 1098 aaPredicted RBP13.35□□□□□ -0.27
ATXN3-201ENST00000340660 ATAT1Q5SQI0 421 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms