RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 STRIP2Q9ULQ0 834 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 PCDHA1Q9Y5I3 950 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 RINLQ6ZS11 566 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 ATP6V1E2Q96A05 226 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 LGR6Q9HBX8 967 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 KDM6BO15054 1643 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 A1BGP04217 495 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 ATXN3P54252 364 aaPredicted RBP8.6□□□□□ -1.03
TNPO1-201ENST00000337273 TAF1DQ9H5J8 278 aaPredicted RBP8.6□□□□□ -1.03
TNPO1-201ENST00000337273 KMT5AQ9NQR1 393 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 CSADQ9Y600 493 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 CHRNA3P32297 505 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 CC2D1AQ6P1N0 951 aaPredicted RBP8.6□□□□□ -1.03
TNPO1-201ENST00000337273 ARMC2Q8NEN0 867 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 SMYD3Q9H7B4 428 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 PHKG2P15735 406 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 EIF4A3P38919 411 aaKnown RBP8.6□□□□□ -1.03
TNPO1-201ENST00000337273 PPP2R2AP63151 447 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 ADCK5Q3MIX3 580 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 SCG3Q8WXD2 468 aaKnown RBP8.6□□□□□ -1.03
TNPO1-201ENST00000337273 MTBPQ96DY7 904 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 CD248Q9HCU0 757 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 CYP26B1Q9NR63 512 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 BICRAQ9NZM4 1560 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 GFAPP14136 432 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 ARL4CP56559 192 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 CYP27A1Q02318 531 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 MAPRE2Q15555 327 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 TAF1BQ53T94 588 aaPredicted RBP8.6□□□□□ -1.03
TNPO1-201ENST00000337273 ACAD11Q709F0 780 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 EPM2AIP1Q7L775 607 aaPredicted RBP8.6□□□□□ -1.03
TNPO1-201ENST00000337273 DHX36Q9H2U1 1008 aaKnown RBP8.6□□□□□ -1.03
TNPO1-201ENST00000337273 BTG4Q9NY30 223 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 SNX5Q9Y5X3 404 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 SPATA31E1Q6ZUB1 1445 aa8.6□□□□□ -1.03
TNPO1-201ENST00000337273 SPDYE16A6NNV3 312 aaPredicted RBP8.59□□□□□ -1.03
TNPO1-201ENST00000337273 ANXA13P27216 316 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 TRADDQ15628 312 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 SPDYE2Q495Y8 402 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 CEP70Q8NHQ1 597 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 CCDC127Q96BQ5 260 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 CFAP36Q96G28 342 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 SLC4A1P02730 911 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 KCNA4P22459 653 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 IL1RL1Q01638 556 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 MAP3K10Q02779 954 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 LMBRD2Q68DH5 695 aaPredicted RBP8.59□□□□□ -1.03
TNPO1-201ENST00000337273 SH2B2O14492 632 aaPredicted RBP8.59□□□□□ -1.03
TNPO1-201ENST00000337273 COPEO14579 308 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 PRPSAP2O60256 369 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 STAT2P52630 851 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 HPS4Q9NQG7 708 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 TLR7Q9NYK1 1049 aaKnown RBP8.59□□□□□ -1.03
TNPO1-201ENST00000337273 ATP10AO60312 1499 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 MAP3K15Q6ZN16 1313 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 KDM5CP41229 1560 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 CPSF1Q10570 1443 aaKnown RBP8.59□□□□□ -1.03
TNPO1-201ENST00000337273 LRRIQ4A6NIV6 560 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 KRT4P19013 534 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 CIITAP33076 1130 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 GRM1Q13255 1194 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 ANO4Q32M45 955 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 CCDC144BQ3MJ40 725 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 SYDE1Q6ZW31 735 aaPredicted RBP8.59□□□□□ -1.03
TNPO1-201ENST00000337273 TBC1D1Q86TI0 1168 aaPredicted RBP8.59□□□□□ -1.03
TNPO1-201ENST00000337273 ZNF496Q96IT1 587 aaPredicted RBP8.59□□□□□ -1.03
TNPO1-201ENST00000337273 TMEM247A6NEH6 219 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 SFI1A8K8P3 1242 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 PAPOLAP51003 745 aaKnown RBP8.59□□□□□ -1.03
TNPO1-201ENST00000337273 NOP14P78316 857 aaKnown RBP8.59□□□□□ -1.03
TNPO1-201ENST00000337273 UNC13DQ70J99 1090 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 PLAAQ9Y263 795 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 ZNF711Q9Y462 761 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 RASA4BC9J798 803 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 RASA4O43374 803 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 CASP2P42575 452 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 EML3Q32P44 896 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 METTL13Q8N6R0 699 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 TTLL11Q8NHH1 800 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 MYO18AQ92614 2054 aaKnown RBP8.59□□□□□ -1.03
TNPO1-201ENST00000337273 PVALEFA0A1B0GWK0 134 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 KCNQ3O43525 872 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 NCF2P19878 526 aaPredicted RBP8.59□□□□□ -1.03
TNPO1-201ENST00000337273 CDC25AP30304 524 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 TAP1Q03518 808 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 TFDP2Q14188 446 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 PPP1R18Q6NYC8 613 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 METTL23Q86XA0 190 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 NIM1KQ8IY84 436 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 PAGE5Q96GU1 130 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 TEKT2Q9UIF3 430 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 DNAJC6O75061 913 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 TMEM259Q4ZIN3 620 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 SESTD1Q86VW0 696 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 KIF2BQ8N4N8 673 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 PDLIM2Q96JY6 352 aa8.59□□□□□ -1.03
TNPO1-201ENST00000337273 SAMSN1Q9NSI8 373 aaKnown RBP8.59□□□□□ -1.03
TNPO1-201ENST00000337273 SYF2O95926 243 aaKnown RBP8.59□□□□□ -1.04
TNPO1-201ENST00000337273 KRT16P08779 473 aa8.59□□□□□ -1.04
TNPO1-201ENST00000337273 DDX5P17844 614 aaKnown RBP8.59□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms