RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 IQCB1Q15051 598 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 SPATA1Q5VX52 437 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 CC2D1AQ6P1N0 951 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-201ENST00000334136 SLC9A2Q9UBY0 812 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 STK17AQ9UEE5 414 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 COL4A3BPQ9Y5P4 624 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 PHF20L1A8MW92 1017 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 KCNJ18B7U540 433 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 RNF40O75150 1001 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 RPL13P26373 211 aaKnown RBP12.89□□□□□ -0.35
HDAC6-201ENST00000334136 KCNJ12Q14500 433 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 TOGARAM2Q6ZUX3 1019 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 CYFIP1Q7L576 1253 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 CCDC25Q86WR0 208 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 RIOX2Q8IUF8 465 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 FMR1NBQ8N0W7 255 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-201ENST00000334136 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.89□□□□□ -0.35
HDAC6-201ENST00000334136 PRDM4Q9UKN5 801 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 EXOC7Q9UPT5 735 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 UNCXA6NJT0 531 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 CTIFO43310 598 aaKnown RBP12.89□□□□□ -0.35
HDAC6-201ENST00000334136 PLCG1P19174 1290 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 SWSAP1Q6NVH7 229 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 ANKRD23Q86SG2 305 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 FAM71BQ8TC56 605 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 EXOC4Q96A65 974 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 IL17RAQ96F46 866 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 CABS1Q96KC9 395 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 IFIH1Q9BYX4 1025 aaKnown RBP12.89□□□□□ -0.35
HDAC6-201ENST00000334136 JPH1Q9HDC5 661 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-201ENST00000334136 A1CFQ9NQ94 594 aaKnown RBP12.89□□□□□ -0.35
HDAC6-201ENST00000334136 ZNF112Q9UJU3 913 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 PLIN4Q96Q06 1357 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 BAZ2AQ9UIF9 1905 aaKnown RBP12.88□□□□□ -0.35
HDAC6-201ENST00000334136 MAFGO15525 162 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 ATP8B1O43520 1251 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 SNHG28P0DPA3 235 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 ATP2C1P98194 919 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-201ENST00000334136 TMEM132BQ14DG7 1078 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 MUM1L1Q5H9M0 696 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 APBB1IPQ7Z5R6 666 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-201ENST00000334136 DHX40Q8IX18 779 aaKnown RBP12.88□□□□□ -0.35
HDAC6-201ENST00000334136 FAM178BQ8IXR5 827 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 RETREG2Q8NC44 543 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 IWS1Q96ST2 819 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 PCDHA10Q9Y5I2 948 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 RREB1Q92766 1687 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 LRRIQ4A6NIV6 560 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 GTPBP6O43824 516 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-201ENST00000334136 PLA2G6O60733 806 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 JAG1P78504 1218 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 CCZ1BP86790 482 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 CCZ1P86791 482 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-201ENST00000334136 ST3GAL1Q11201 340 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 CASP8Q14790 479 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 ZBTB8OSQ8IWT0 167 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 PDCD2LQ9BRP1 358 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 BHMT2Q9H2M3 363 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 GABBR1Q9UBS5 961 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 COL24A1Q17RW2 1714 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 E7EVH7 732 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 QARSP47897 775 aaKnown RBP12.88□□□□□ -0.35
HDAC6-201ENST00000334136 TNNC1P63316 161 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 MORC3Q14149 939 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 BANK1Q8NDB2 785 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 OR6J1Q8NGC5 347 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 PIGOQ8TEQ8 1089 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 MAGEF1Q9HAY2 307 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 P4HBP07237 508 aaKnown RBP12.88□□□□□ -0.35
HDAC6-201ENST00000334136 C6orf222P0C671 652 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-201ENST00000334136 ADORA2AP29274 412 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 CASP1P29466 404 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 MAP2K2P36507 400 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 SP3Q02447 781 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 IFI16Q16666 785 aaKnown RBP12.88□□□□□ -0.35
HDAC6-201ENST00000334136 NELFCDQ8IXH7 590 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 DYDC2Q96IM9 177 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 MED4Q9NPJ6 270 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 KCNH7Q9NS40 1196 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 PANK4Q9NVE7 773 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 MAN1B1Q9UKM7 699 aa12.88□□□□□ -0.35
HDAC6-201ENST00000334136 A0A0G2JLL6 359 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-201ENST00000334136 SLFN14P0C7P3 912 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 FSTL1Q12841 308 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 RRAGAQ7L523 313 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 PRRT2Q7Z6L0 340 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-201ENST00000334136 WDR24Q96S15 920 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 CAPS2Q9BXY5 557 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 TRIM6Q9C030 488 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-201ENST00000334136 PRM3Q9NNZ6 103 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 ZNF302Q9NR11 478 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 PCDHB13Q9Y5F0 798 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 TBX3O15119 743 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 PLA2G4BP0C869 781 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 SREBF1P36956 1147 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 CNTN2Q02246 1040 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 ODR4Q5SWX8 454 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 SLC30A10Q6XR72 485 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 RSPH3Q86UC2 560 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 CCDC155Q8N6L0 562 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms