RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 C1orf186Q6ZWK4 172 aa20.74■□□□□ 0.91
RFTN1-201ENST00000334133 FRMD5Q7Z6J6 570 aa20.74■□□□□ 0.91
RFTN1-201ENST00000334133 RPGRIP1Q96KN7 1286 aa20.74■□□□□ 0.91
RFTN1-201ENST00000334133 SELENOOQ9BVL4 669 aa20.74■□□□□ 0.91
RFTN1-201ENST00000334133 COL4A5P29400 1685 aa20.74■□□□□ 0.91
RFTN1-201ENST00000334133 ZSCAN5CA6NGD5 496 aaPredicted RBP20.74■□□□□ 0.91
RFTN1-201ENST00000334133 TRIM49P0CI25 452 aa20.74■□□□□ 0.91
RFTN1-201ENST00000334133 TRIM49CP0CI26 452 aa20.74■□□□□ 0.91
RFTN1-201ENST00000334133 TTLL6Q8N841 843 aa20.74■□□□□ 0.91
RFTN1-201ENST00000334133 SUPT20HQ8NEM7 779 aa20.74■□□□□ 0.91
RFTN1-201ENST00000334133 IL31RAQ8NI17 732 aa20.74■□□□□ 0.91
RFTN1-201ENST00000334133 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.74■□□□□ 0.912e-9■■■■■ 223.6
RFTN1-201ENST00000334133 AIPL1Q9NZN9 384 aa20.74■□□□□ 0.91
RFTN1-201ENST00000334133 ESYT3A0FGR9 886 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 RBAK-RBAKDNI3L0D1 243 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 NFIBO00712 420 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 TCP1P17987 556 aaKnown RBP20.73■□□□□ 0.91
RFTN1-201ENST00000334133 HMGB2P26583 209 aaKnown RBP20.73■□□□□ 0.91
RFTN1-201ENST00000334133 NOP2P46087 812 aaKnown RBP20.73■□□□□ 0.91
RFTN1-201ENST00000334133 MCTP2Q6DN12 878 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 CHURC1Q8WUH1 139 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 COL20A1Q9P218 1284 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 ZMYM2Q9UBW7 1377 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 TMEM150BA6NC51 233 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 TISP43B9A030 160 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 PRELPP51888 382 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 EPHA7Q15375 998 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 NAB2Q15742 525 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 GRIPAP1Q4V328 841 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 ODR4Q5SWX8 454 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 PROCA1Q8NCQ7 364 aaPredicted RBP20.73■□□□□ 0.91
RFTN1-201ENST00000334133 TRERF1Q96PN7 1200 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 ZNF341Q9BYN7 854 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 NUCKS1Q9H1E3 243 aaKnown RBP20.73■□□□□ 0.91
RFTN1-201ENST00000334133 RANBP17Q9H2T7 1088 aaKnown RBP20.73■□□□□ 0.91
RFTN1-201ENST00000334133 TMCO5BA8MYB1 307 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 PAFAH1B1P43034 410 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 SPDYE2Q495Y8 402 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 SND1Q7KZF4 910 aaKnown RBP eCLIP20.73■□□□□ 0.91
RFTN1-201ENST00000334133 SYN2Q92777 582 aaPredicted RBP20.73■□□□□ 0.91
RFTN1-201ENST00000334133 LXNQ9BS40 222 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 WDR11Q9BZH6 1224 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 PARVGQ9HBI0 331 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 HPCAL4Q9UM19 191 aa20.73■□□□□ 0.91
RFTN1-201ENST00000334133 IPO5O00410 1097 aaKnown RBP20.72■□□□□ 0.91
RFTN1-201ENST00000334133 GFPT2O94808 682 aa20.72■□□□□ 0.91
RFTN1-201ENST00000334133 DPEP1P16444 411 aa20.72■□□□□ 0.91
RFTN1-201ENST00000334133 RXRBP28702 533 aa20.72■□□□□ 0.91
RFTN1-201ENST00000334133 FAM178BQ8IXR5 827 aa20.72■□□□□ 0.91
RFTN1-201ENST00000334133 FAM186BQ8IYM0 893 aa20.72■□□□□ 0.91
RFTN1-201ENST00000334133 SLC5A5Q92911 643 aa20.72■□□□□ 0.91
RFTN1-201ENST00000334133 GMLQ99445 158 aa20.72■□□□□ 0.91
RFTN1-201ENST00000334133 CCPG1Q9ULG6 757 aa20.72■□□□□ 0.91
RFTN1-201ENST00000334133 VIL1P09327 827 aaKnown RBP20.72■□□□□ 0.91
RFTN1-201ENST00000334133 ITGB5P18084 799 aa20.72■□□□□ 0.91
RFTN1-201ENST00000334133 CAP2P40123 477 aa20.72■□□□□ 0.91
RFTN1-201ENST00000334133 HNRNPH2P55795 449 aaKnown RBP20.72■□□□□ 0.91
RFTN1-201ENST00000334133 ZNF772Q68DY9 489 aaPredicted RBP20.72■□□□□ 0.91
RFTN1-201ENST00000334133 IQCEQ6IPM2 695 aa20.72■□□□□ 0.91
RFTN1-201ENST00000334133 STK32BQ9NY57 414 aa20.72■□□□□ 0.91
RFTN1-201ENST00000334133 TARSL2A2RTX5 802 aaKnown RBP20.71■□□□□ 0.91
RFTN1-201ENST00000334133 EGFRP00533 1210 aa20.71■□□□□ 0.91
RFTN1-201ENST00000334133 RPL13P26373 211 aaKnown RBP20.71■□□□□ 0.91
RFTN1-201ENST00000334133 HOXA7P31268 230 aaPredicted RBP20.71■□□□□ 0.91
RFTN1-201ENST00000334133 SIX2Q9NPC8 291 aa20.71■□□□□ 0.91
RFTN1-201ENST00000334133 MRPL11Q9Y3B7 192 aaKnown RBP20.71■□□□□ 0.91
RFTN1-201ENST00000334133 SAMM50Q9Y512 469 aa20.71■□□□□ 0.91
RFTN1-201ENST00000334133 GRID2IPA4D2P6 1211 aa20.71■□□□□ 0.91
RFTN1-201ENST00000334133 TUBBP07437 444 aa20.71■□□□□ 0.91
RFTN1-201ENST00000334133 GGCXP38435 758 aa20.71■□□□□ 0.91
RFTN1-201ENST00000334133 GBP6Q6ZN66 633 aa20.71■□□□□ 0.91
RFTN1-201ENST00000334133 PCIF1Q9H4Z3 704 aa20.71■□□□□ 0.91
RFTN1-201ENST00000334133 SYF2O95926 243 aaKnown RBP20.7■□□□□ 0.9
RFTN1-201ENST00000334133 MAP9Q49MG5 647 aa20.7■□□□□ 0.9
RFTN1-201ENST00000334133 CCDC70Q6NSX1 233 aa20.7■□□□□ 0.9
RFTN1-201ENST00000334133 LRRN2O75325 713 aa20.7■□□□□ 0.9
RFTN1-201ENST00000334133 ALAS1P13196 640 aa20.7■□□□□ 0.9
RFTN1-201ENST00000334133 PPP2R5CQ13362 524 aa20.7■□□□□ 0.9
RFTN1-201ENST00000334133 MMGT1Q8N4V1 131 aa20.7■□□□□ 0.9
RFTN1-201ENST00000334133 RNF10Q8N5U6 811 aaKnown RBP20.7■□□□□ 0.9
RFTN1-201ENST00000334133 HOOK2Q96ED9 719 aa20.7■□□□□ 0.9
RFTN1-201ENST00000334133 FAM204AQ9H8W3 233 aa20.7■□□□□ 0.9
RFTN1-201ENST00000334133 TUFT1Q9NNX1 390 aa20.7■□□□□ 0.9
RFTN1-201ENST00000334133 RNF40O75150 1001 aa20.7■□□□□ 0.9
RFTN1-201ENST00000334133 CBWD6Q4V339 395 aa20.7■□□□□ 0.9
RFTN1-201ENST00000334133 CBWD3Q5JTY5 395 aa20.7■□□□□ 0.9
RFTN1-201ENST00000334133 CBWD5Q5RIA9 395 aa20.7■□□□□ 0.9
RFTN1-201ENST00000334133 C8orf74Q6P047 294 aa20.7■□□□□ 0.9
RFTN1-201ENST00000334133 ALKBH5Q6P6C2 394 aaKnown RBP20.7■□□□□ 0.9
RFTN1-201ENST00000334133 OLFML3Q9NRN5 406 aa20.7■□□□□ 0.9
RFTN1-201ENST00000334133 SLC26A4O43511 780 aa20.69■□□□□ 0.9
RFTN1-201ENST00000334133 TRADDQ15628 312 aa20.69■□□□□ 0.9
RFTN1-201ENST00000334133 BMT2Q1RMZ1 405 aa20.69■□□□□ 0.9
RFTN1-201ENST00000334133 SYCP3Q8IZU3 236 aa20.69■□□□□ 0.9
RFTN1-201ENST00000334133 FIZ1Q96SL8 496 aa20.69■□□□□ 0.9
RFTN1-201ENST00000334133 RAVER2Q9HCJ3 691 aaKnown RBP20.69■□□□□ 0.9
RFTN1-201ENST00000334133 LUC7LQ9NQ29 371 aaKnown RBP20.69■□□□□ 0.9
RFTN1-201ENST00000334133 NAGPAQ9UK23 515 aa20.69■□□□□ 0.9
RFTN1-201ENST00000334133 ARHGEF35A5YM69 484 aa20.69■□□□□ 0.9
RFTN1-201ENST00000334133 WNT10BO00744 389 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms