RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 RAB15P59190 212 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 KRT33BQ14525 404 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 KLHL12Q53G59 568 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 MIGA1Q8NAN2 632 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 RWDD2AQ9UIY3 292 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 SOS2Q07890 1332 aaPredicted RBP11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 LPXNO60711 386 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 WDR37Q9Y2I8 494 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 FSBPO95073 299 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 PLD3Q8IV08 490 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 SIX6OS1Q8N1H7 587 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 RYBPQ8N488 228 aaPredicted RBP11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 ARHGEF3Q9NR81 526 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 HPCAL4Q9UM19 191 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 ZMYND10O75800 440 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 TNNC2P02585 160 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 MYCLP12524 364 aaPredicted RBP11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 CUL4AQ13619 759 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 SPOPLQ6IQ16 392 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 CCDC28BQ9BUN5 200 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 HSPD1P10809 573 aaKnown RBP11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 RFC4P35249 363 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 R3HDM1Q15032 1099 aaKnown RBP11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 NELFCDQ8IXH7 590 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 RNPEPQ9H4A4 650 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 DNAJC12Q9UKB3 198 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 SMG5Q9UPR3 1016 aaKnown RBP11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 TROQ12816 1431 aaPredicted RBP11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 PLS3P13797 630 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 CCDC153Q494R4 210 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 ALKBH8Q96BT7 664 aaKnown RBP11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 KRT16P08779 473 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 CLASP1Q7Z460 1538 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 GGPS1O95749 300 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 RECQLP46063 649 aaPredicted RBP11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 DMC1Q14565 340 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 PREPLQ4J6C6 727 aaPredicted RBP11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 DMAP1Q9NPF5 467 aaPredicted RBP11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 INPP5FQ9Y2H2 1132 aa11.03□□□□□ -0.64
SPTBN1-201ENST00000333896 AGTP01019 485 aa11.02□□□□□ -0.64
SPTBN1-201ENST00000333896 STKLD1Q8NE28 680 aa11.02□□□□□ -0.64
SPTBN1-201ENST00000333896 SLITRK6Q9H5Y7 841 aa11.02□□□□□ -0.64
SPTBN1-201ENST00000333896 PRR23AA6NEV1 266 aa11.02□□□□□ -0.64
SPTBN1-201ENST00000333896 LAD1O00515 517 aa11.02□□□□□ -0.64
SPTBN1-201ENST00000333896 HSPA1AP0DMV8 641 aaKnown RBP11.02□□□□□ -0.64
SPTBN1-201ENST00000333896 HSPA1BP0DMV9 641 aaKnown RBP11.02□□□□□ -0.64
SPTBN1-201ENST00000333896 TCF3P15923 654 aa11.02□□□□□ -0.64
SPTBN1-201ENST00000333896 CA4P22748 312 aa11.02□□□□□ -0.64
SPTBN1-201ENST00000333896 ZBED6P86452 979 aa11.02□□□□□ -0.64
SPTBN1-201ENST00000333896 ITGB3BPQ13352 177 aaPredicted RBP11.02□□□□□ -0.64
SPTBN1-201ENST00000333896 PDAP1Q13442 181 aaKnown RBP11.02□□□□□ -0.64
SPTBN1-201ENST00000333896 RCN1Q15293 331 aa11.02□□□□□ -0.64
SPTBN1-201ENST00000333896 NEK8Q86SG6 692 aa11.02□□□□□ -0.64
SPTBN1-201ENST00000333896 RBBP8NLQ8NC74 664 aaPredicted RBP11.02□□□□□ -0.64
SPTBN1-201ENST00000333896 FANCEQ9HB96 536 aa11.02□□□□□ -0.64
SPTBN1-201ENST00000333896 M0QZ92 97 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 GTPBP6O43824 516 aaPredicted RBP11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 PGM1P36871 562 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 CYP4F22Q6NT55 531 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 TRMT44Q8IYL2 757 aaKnown RBP11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 PBXIP1Q96AQ6 731 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 MAP2P11137 1827 aaKnown RBP11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 RASA4BC9J798 803 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 O00370 1275 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 RASA4O43374 803 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 CHEK2O96017 543 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 IMPDH2P12268 514 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 CYP2J2P51589 502 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 GPR141Q7Z602 305 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 DNAAF3Q8N9W5 541 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 WDR60Q8WVS4 1066 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 EDEM3Q9BZQ6 932 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 FHDC1Q9C0D6 1143 aaPredicted RBP11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 BLZF1Q9H2G9 400 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 KLHL31Q9H511 634 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 HMOX2P30519 316 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 A1CFQ9NQ94 594 aaKnown RBP11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 ATXN10Q9UBB4 475 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 C15orf41Q9Y2V0 281 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 EVPLQ92817 2033 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 STX7O15400 261 aaKnown RBP11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 KITP10721 976 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 SLCO1A2P46721 670 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 NDUFA8P51970 172 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 ADARP55265 1226 aaKnown RBP11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 RFX6Q8HWS3 928 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 ARHGEF1Q92888 912 aaKnown RBP11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 XPAP23025 273 aaPredicted RBP11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 METTL13Q8N6R0 699 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 ZCCHC17Q9NP64 241 aaKnown RBP11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 PCDHB13Q9Y5F0 798 aa11.02□□□□□ -0.65
SPTBN1-201ENST00000333896 KRT37O76014 449 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 MSL3P1P0C860 447 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 H2AFXP16104 143 aaPredicted RBP11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 SCTRP47872 440 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 OLR1P78380 273 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 RBL2Q08999 1139 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 MORF4L2Q15014 288 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 MAPRE2Q15555 327 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 SH3BP5LQ7L8J4 393 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms