RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 GPCPD1Q9NPB8 672 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 IL17RBQ9NRM6 502 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 DNAAF2Q9NVR5 837 aaKnown RBP12.87□□□□□ -0.35
LIMK2-202ENST00000333611 KBTBD4Q9NVX7 518 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 SCOCQ9UIL1 159 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 ANO9A1A5B4 782 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.86□□□□□ -0.35
LIMK2-202ENST00000333611 TRAPPC3O43617 180 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 KRT16P08779 473 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 DESP17661 470 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 KIAA0753Q2KHM9 967 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 MIIPQ5JXC2 388 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 CLEC10AQ8IUN9 316 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 ARHGEF2Q92974 986 aaKnown RBP12.86□□□□□ -0.35
LIMK2-202ENST00000333611 IFT74Q96LB3 600 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 PRMT1Q99873 361 aaKnown RBP12.86□□□□□ -0.35
LIMK2-202ENST00000333611 PHRF1Q9P1Y6 1649 aaKnown RBP12.86□□□□□ -0.35
LIMK2-202ENST00000333611 MYH13Q9UKX3 1938 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 LOC102724428A0A0B4J2F2 783 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 KCNK3O14649 394 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 ALDH3A1P30838 453 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 SIK1P57059 783 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 KLC1Q07866 573 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 PPP4R3AQ6IN85 833 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 ZNF365Q70YC5 407 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 NEK8Q86SG6 692 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 FAM133AQ8N9E0 248 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 TSG101Q99816 390 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 MTA3Q9BTC8 594 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 C6orf50Q9HD87 102 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.86□□□□□ -0.35
LIMK2-202ENST00000333611 AGAP1Q9UPQ3 857 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.86□□□□□ -0.35
LIMK2-202ENST00000333611 COL5A2P05997 1499 aaPredicted RBP12.86□□□□□ -0.35
LIMK2-202ENST00000333611 MYMKA6NI61 221 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 TDP2O95551 362 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 CHN1P15882 459 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 HSD17B3P37058 310 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 CALCRLQ16602 461 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 MEA1Q16626 185 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 PARP10Q53GL7 1025 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 TMEM47Q9BQJ4 181 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 NSRP1Q9H0G5 558 aaKnown RBP12.86□□□□□ -0.35
LIMK2-202ENST00000333611 SLC5A4Q9NY91 659 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 ARPP21Q9UBL0 812 aaPredicted RBP12.86□□□□□ -0.35
LIMK2-202ENST00000333611 PNMA3Q9UL41 463 aa12.86□□□□□ -0.35
LIMK2-202ENST00000333611 NTSR2O95665 410 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 CCND1P24385 295 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 C6orf89Q6UWU4 347 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 ISLR2Q6UXK2 745 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 EBF2Q9HAK2 575 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 SERPINA10Q9UK55 444 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 ZMYND8Q9ULU4 1186 aaPredicted RBP12.85□□□□□ -0.35
LIMK2-202ENST00000333611 ECM29Q5VYK3 1845 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 PICALMQ13492 652 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 REXO1Q8N1G1 1221 aaKnown RBP12.85□□□□□ -0.35
LIMK2-202ENST00000333611 LRRC47Q8N1G4 583 aaKnown RBP12.85□□□□□ -0.35
LIMK2-202ENST00000333611 DTX3LQ8TDB6 740 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 CCT6BQ92526 530 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 NUDCD1Q96RS6 583 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 SYT15Q9BQS2 421 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 MOV10L1Q9BXT6 1211 aaKnown RBP12.85□□□□□ -0.35
LIMK2-202ENST00000333611 PACSIN1Q9BY11 444 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 ADAMTS7Q9UKP4 1686 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 LDHBP07195 334 aaKnown RBP12.85□□□□□ -0.35
LIMK2-202ENST00000333611 PAX3P23760 479 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 GNAQP50148 359 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 ITPK1Q13572 414 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 CDC37Q16543 378 aaPredicted RBP12.85□□□□□ -0.35
LIMK2-202ENST00000333611 MAN2A1Q16706 1144 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 TMEM266Q2M3C6 531 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 P3H1Q32P28 736 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 SLC9C1Q4G0N8 1177 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 XPO6Q96QU8 1125 aaKnown RBP12.85□□□□□ -0.35
LIMK2-202ENST00000333611 SEPT11Q9NVA2 429 aaKnown RBP12.85□□□□□ -0.35
LIMK2-202ENST00000333611 ZNF652Q9Y2D9 606 aa12.85□□□□□ -0.35
LIMK2-202ENST00000333611 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.85□□□□□ -0.35
LIMK2-202ENST00000333611 NPHP3-ACAD11A0A0J9YXS1 232 aa12.84□□□□□ -0.35
LIMK2-202ENST00000333611 F8W031 263 aaPredicted RBP12.84□□□□□ -0.35
LIMK2-202ENST00000333611 CAMTA2O94983 1202 aa12.84□□□□□ -0.35
LIMK2-202ENST00000333611 RPS8P62241 208 aaKnown RBP12.84□□□□□ -0.35
LIMK2-202ENST00000333611 KLHL30Q0D2K2 578 aa12.84□□□□□ -0.35
LIMK2-202ENST00000333611 SLMAPQ14BN4 828 aa12.84□□□□□ -0.35
LIMK2-202ENST00000333611 UBE2SQ16763 222 aa12.84□□□□□ -0.35
LIMK2-202ENST00000333611 SFMBT2Q5VUG0 894 aa12.84□□□□□ -0.35
LIMK2-202ENST00000333611 INTS5Q6P9B9 1019 aaKnown RBP12.84□□□□□ -0.35
LIMK2-202ENST00000333611 WHAMMQ8TF30 809 aa12.84□□□□□ -0.35
LIMK2-202ENST00000333611 LARP4BQ92615 738 aaKnown RBP12.84□□□□□ -0.35
LIMK2-202ENST00000333611 LRRC45Q96CN5 670 aa12.84□□□□□ -0.35
LIMK2-202ENST00000333611 NUDT12Q9BQG2 462 aa12.84□□□□□ -0.35
LIMK2-202ENST00000333611 DDX47Q9H0S4 455 aaKnown RBP12.84□□□□□ -0.35
LIMK2-202ENST00000333611 PLAGL2Q9UPG8 496 aa12.84□□□□□ -0.35
LIMK2-202ENST00000333611 RAD51CO43502 376 aa12.84□□□□□ -0.35
LIMK2-202ENST00000333611 CAPN15O75808 1086 aa12.84□□□□□ -0.35
LIMK2-202ENST00000333611 TNNC1P63316 161 aa12.84□□□□□ -0.35
LIMK2-202ENST00000333611 DCAF17Q5H9S7 520 aaPredicted RBP12.84□□□□□ -0.35
LIMK2-202ENST00000333611 KRT79Q5XKE5 535 aa12.84□□□□□ -0.35
LIMK2-202ENST00000333611 TLR10Q9BXR5 811 aa12.84□□□□□ -0.35
LIMK2-202ENST00000333611 TTYH3Q9C0H2 523 aa12.84□□□□□ -0.35
LIMK2-202ENST00000333611 CCSER1Q9C0I3 900 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms