RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 REV3LO60673 3130 aa12.41□□□□□ -0.42
APOBEC3B-201ENST00000333467 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 GRXCR1A8MXD5 290 aa12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 SPATA31C2B4DYI2 1134 aa12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 hCG_1984214I3L0E3 225 aa12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 STXBP3O00186 592 aa12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 NOP56O00567 594 aaKnown RBP12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 FGBP02675 491 aa12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 MMP1P03956 469 aa12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 LGALS2P05162 132 aa12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 CCZ1BP86790 482 aa12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 CCZ1P86791 482 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 MYL5Q02045 173 aa12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 DPCR1Q3MIW9 517 aa12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 XRRA1Q6P2D8 792 aa12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 METTL7BQ6UX53 244 aa12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 CYFIP1Q7L576 1253 aa12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 DEFB128Q7Z7B8 93 aa12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 NOSTRINQ8IVI9 506 aa12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 SMAP1Q8IYB5 467 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 CCDC155Q8N6L0 562 aa12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 ZNF713Q8N859 430 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 KRI1Q8N9T8 703 aaKnown RBP12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 DHX38Q92620 1227 aaKnown RBP12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 C16orf70Q9BSU1 422 aa12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 MTIF3Q9H2K0 278 aaKnown RBP12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 CGNQ9P2M7 1197 aaKnown RBP12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 TRANK1O15050 2925 aa12.4□□□□□ -0.42
APOBEC3B-201ENST00000333467 MYH9P35579 1960 aaKnown RBP12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 TMEM265A0A087WTH1 108 aa12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 PPFIA4O75335 1185 aa12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 PFKMP08237 780 aa12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 PRKCSHP14314 528 aaPredicted RBP12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 ITGB5P18084 799 aa12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 SFPQP23246 707 aaKnown RBP eCLIP12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 PBX2P40425 430 aa12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 ADCY7P51828 1080 aa12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 SP4Q02446 784 aa12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 BFSP2Q13515 415 aa12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 NEDD9Q14511 834 aa12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 NLRX1Q86UT6 975 aa12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 TRIM50Q86XT4 487 aa12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 RPUSD2Q8IZ73 545 aaKnown RBP12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 CCAR2Q8N163 923 aaKnown RBP12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 KIF18AQ8NI77 898 aa12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 CAGE1Q8TC20 777 aa12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 C16orf45Q96MC5 204 aaPredicted RBP12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 PBX4Q9BYU1 374 aa12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 BARHL2Q9NY43 387 aa12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 PCDHA6Q9UN73 950 aa12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 TELO2Q9Y4R8 837 aa12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 PCDHA8Q9Y5H6 950 aa12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 V9GY48 417 aaPredicted RBP12.39□□□□□ -0.43
APOBEC3B-201ENST00000333467 ZBBXA8MT70 800 aa12.38□□□□□ -0.43
APOBEC3B-201ENST00000333467 IQCF3P0C7M6 154 aa12.38□□□□□ -0.43
APOBEC3B-201ENST00000333467 RFC2P35250 354 aa12.38□□□□□ -0.43
APOBEC3B-201ENST00000333467 MTMR1Q13613 665 aa12.38□□□□□ -0.43
APOBEC3B-201ENST00000333467 HIC1Q14526 733 aa12.38□□□□□ -0.43
APOBEC3B-201ENST00000333467 NCAPHQ15003 741 aa12.38□□□□□ -0.43
APOBEC3B-201ENST00000333467 ZNF710Q8N1W2 664 aa12.38□□□□□ -0.43
APOBEC3B-201ENST00000333467 AFAP1L1Q8TED9 768 aa12.38□□□□□ -0.43
APOBEC3B-201ENST00000333467 WNT8BQ93098 351 aa12.38□□□□□ -0.43
APOBEC3B-201ENST00000333467 GPRASP2Q96D09 838 aa12.38□□□□□ -0.43
APOBEC3B-201ENST00000333467 GPR20Q99678 358 aa12.38□□□□□ -0.43
APOBEC3B-201ENST00000333467 RNF26Q9BY78 433 aaPredicted RBP12.38□□□□□ -0.43
APOBEC3B-201ENST00000333467 ANO3Q9BYT9 981 aa12.38□□□□□ -0.43
APOBEC3B-201ENST00000333467 SEMA6BQ9H3T3 888 aa12.38□□□□□ -0.43
APOBEC3B-201ENST00000333467 EHMT1Q9H9B1 1298 aa12.38□□□□□ -0.43
APOBEC3B-201ENST00000333467 RIC8AQ9NPQ8 531 aa12.38□□□□□ -0.43
APOBEC3B-201ENST00000333467 PKD2L1Q9P0L9 805 aa12.38□□□□□ -0.43
APOBEC3B-201ENST00000333467 H3BRB1 525 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 SMC2O95347 1197 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 KCNA2P16389 499 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 ZNF200P98182 395 aaPredicted RBP12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 RBL2Q08999 1139 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 PFKFB3Q16875 520 aaPredicted RBP12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 NT5DC1Q5TFE4 455 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 SHC4Q6S5L8 630 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 KRBA2Q6ZNG9 492 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 LRRC8DQ7L1W4 858 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 FILIP1Q7Z7B0 1213 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 MLKLQ8NB16 471 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 RETREG2Q8NC44 543 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 TIFAQ96CG3 184 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 CDHR1Q96JP9 859 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 CDX2Q99626 313 aaPredicted RBP12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 SENP7Q9BQF6 1050 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 PYM1Q9BRP8 204 aaKnown RBP12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 SLC26A6Q9BXS9 759 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 XPO4Q9C0E2 1151 aaKnown RBP12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 TUT1Q9H6E5 874 aaKnown RBP12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 TMEM260Q9NX78 707 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 KCNH3Q9ULD8 1083 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 UBIAD1Q9Y5Z9 338 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 NLRC5Q86WI3 1866 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 SMCO2A6NFE2 343 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 ATP9AO75110 1047 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 SMIM10L2AP0DMW4 78 aa12.37□□□□□ -0.43
APOBEC3B-201ENST00000333467 SMIM10L2BP0DMW5 78 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms