RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 POLR2MP0CAP2 368 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 TXNP10599 105 aaKnown RBP7.3□□□□□ -1.24
SMG1-201ENST00000330588 RAG1P15918 1043 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 DGKGP49619 791 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 EXOSC10Q01780 885 aaKnown RBP7.3□□□□□ -1.24
SMG1-201ENST00000330588 FPGSQ05932 587 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 PPIGQ13427 754 aaKnown RBP eCLIP7.3□□□□□ -1.241e-7■□□□□ 10.2
SMG1-201ENST00000330588 ITGA7Q13683 1181 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 SLC35G1Q2M3R5 365 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 EML3Q32P44 896 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 XP32Q5T750 250 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 MFSD5Q6N075 450 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 NOL8Q76FK4 1167 aaKnown RBP7.3□□□□□ -1.24
SMG1-201ENST00000330588 OR6J1Q8NGC5 347 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 NEK1Q96PY6 1258 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 TAAR1Q96RJ0 339 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 PDCD2LQ9BRP1 358 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 MTG1Q9BT17 334 aaPredicted RBP7.3□□□□□ -1.24
SMG1-201ENST00000330588 CPVLQ9H3G5 476 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 VRTNQ9H8Y1 702 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 PDGFCQ9NRA1 345 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 TMEM39AQ9NV64 488 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 COL20A1Q9P218 1284 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 KIAA1024Q9UPX6 916 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 TMEM229AB2RXF0 380 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 K7ELQ4 463 aaPredicted RBP7.29□□□□□ -1.24
SMG1-201ENST00000330588 GNB5O14775 395 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 PARNO95453 639 aaKnown RBP7.29□□□□□ -1.24
SMG1-201ENST00000330588 CFBP00751 764 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 PFKMP08237 780 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 CCND2P30279 289 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 ICAM3P32942 547 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 RBL2Q08999 1139 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 PGM5Q15124 567 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 ARHGEF16Q5VV41 709 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 PSRC1Q6PGN9 363 aaPredicted RBP7.29□□□□□ -1.24
SMG1-201ENST00000330588 APOA5Q6Q788 366 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 SYNE3Q6ZMZ3 975 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 DHX32Q7L7V1 743 aaKnown RBP7.29□□□□□ -1.24
SMG1-201ENST00000330588 EEPD1Q7L9B9 569 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 VSIG10LQ86VR7 867 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 TMEM199Q8N511 208 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 FANCBQ8NB91 859 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 PPTC7Q8NI37 304 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 BADQ92934 168 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 CHMP4CQ96CF2 233 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 PIGSQ96S52 555 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 KATNAL1Q9BW62 490 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 GLT8D2Q9H1C3 349 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 PRDM5Q9NQX1 630 aaPredicted RBP7.29□□□□□ -1.24
SMG1-201ENST00000330588 SEC63Q9UGP8 760 aaKnown RBP7.29□□□□□ -1.24
SMG1-201ENST00000330588 KLF15Q9UIH9 416 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 SLC12A7Q9Y666 1083 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 CARNS1A5YM72 827 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 SOX1O00570 391 aaPredicted RBP7.29□□□□□ -1.24
SMG1-201ENST00000330588 CDK2AP1O14519 115 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 ATXN7O15265 892 aaPredicted RBP7.29□□□□□ -1.24
SMG1-201ENST00000330588 LZTS3O60299 673 aaPredicted RBP7.29□□□□□ -1.24
SMG1-201ENST00000330588 PQBP1O60828 265 aaKnown RBP7.29□□□□□ -1.24
SMG1-201ENST00000330588 HSPA4P34932 840 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 RFC2P35250 354 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 BEX3Q00994 111 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 TNP2Q05952 138 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 ARHGAP1Q07960 439 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 PTK7Q13308 1070 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 LAMC2Q13753 1193 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 DGKDQ16760 1214 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 GNPTABQ3T906 1256 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 RASIP1Q5U651 963 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 PCNX4Q63HM2 1172 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 MCTP2Q6DN12 878 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 CXCL17Q6UXB2 119 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 NFXL1Q6ZNB6 911 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 TMTC3Q6ZXV5 915 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 STK32AQ8WU08 396 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 TBC1D5Q92609 795 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 CUL5Q93034 780 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 VTI1AQ96AJ9 217 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 INPP4AQ96PE3 977 aaPredicted RBP7.29□□□□□ -1.24
SMG1-201ENST00000330588 AGXT2Q9BYV1 514 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 ALDH8A1Q9H2A2 487 aaPredicted RBP7.29□□□□□ -1.24
SMG1-201ENST00000330588 VAT1LQ9HCJ6 419 aa7.29□□□□□ -1.24
SMG1-201ENST00000330588 AVENQ9NQS1 362 aaPredicted RBP7.29□□□□□ -1.24
SMG1-201ENST00000330588 DDX41Q9UJV9 622 aaKnown RBP7.29□□□□□ -1.24
SMG1-201ENST00000330588 GRIN2DO15399 1336 aa7.28□□□□□ -1.24
SMG1-201ENST00000330588 CCDC196A0A1B0GTZ2 297 aa7.28□□□□□ -1.24
SMG1-201ENST00000330588 A0A1W2PNR3 127 aa7.28□□□□□ -1.24
SMG1-201ENST00000330588 PIK3R2O00459 728 aa7.28□□□□□ -1.24
SMG1-201ENST00000330588 MAFGO15525 162 aa7.28□□□□□ -1.24
SMG1-201ENST00000330588 B4GALT4O60513 344 aa7.28□□□□□ -1.24
SMG1-201ENST00000330588 DKK1O94907 266 aa7.28□□□□□ -1.24
SMG1-201ENST00000330588 MMP3P08254 477 aa7.28□□□□□ -1.24
SMG1-201ENST00000330588 CASTP20810 708 aaKnown RBP7.28□□□□□ -1.24
SMG1-201ENST00000330588 ITGB8P26012 769 aa7.28□□□□□ -1.24
SMG1-201ENST00000330588 PSMA5P28066 241 aa7.28□□□□□ -1.24
SMG1-201ENST00000330588 CHST3Q7LGC8 479 aa7.28□□□□□ -1.24
SMG1-201ENST00000330588 HOMER1Q86YM7 354 aa7.28□□□□□ -1.24
SMG1-201ENST00000330588 FAM177A1Q8N128 213 aaPredicted RBP7.28□□□□□ -1.24
SMG1-201ENST00000330588 SRBD1Q8N5C6 995 aaKnown RBP7.28□□□□□ -1.24
SMG1-201ENST00000330588 GIMAP8Q8ND71 665 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms